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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:89905..91032+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001571-T1 ID=KJC3_001571-T1|Name=KJC3_001571-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1128bp|location=Sequence derived from alignment at ch2:89905..91032+ (Aspergillus niger KJC3)
CTCGGCTTCGCTGTTCTCCTACTCTTTATATATAGTAGTCCTCCATTGAG
CTCTTTTCACTTCTCAACTTAAACCTCAACCCTAGTACTACTAGTATCAC
GAAGAAACAAGGTACACACTATCACAATGGCACCTCGACCTGACCCTCCA
GCAACGGGACGTGTTTACTTCCTCGACATCGGAATCTCAACCTCTGAGCC
CAATGGACGTCTTTTGTCCTGCAAGCCCGATGGCTCCGATTTCCGCGAGC
TGATCACTCAACTCAACACCCTGCCCGACGGTATCGCCATTGACTCTGAC
CGCCAACACATCTACTGGACAAACATGGGAATTCCGTCCGCCGATGATGG
ATCCATCCAGCGCTGCGATTACTCAGGGAATAACATCGTCACCATCATCC
CAAAGGGATACACCCATACCCCGAAGCAATTGATCATTGCTCCACGATCT
CAGAAGCTGTACTGGTCTGATCGCGAAGGCCGACGGGTCATGCGAGCGAA
TCTAGATGGGAGTGAGATCGAGGTACTTTACAGGGCCACTTCAAGTGAGG
GCACAAACACACCCGCTGTTCTTGACTGGTGCGTGGGCATTGCGGTTGAC
GAGGAGGCACATTCGGTATATTGGACACAGAAAGGGCCATCGAAGGGCAA
CCTTGGCCGGATCTATCGCATGGGACTTGAGATGAGACAGGGTGAATCAG
CGGAGTCGCGGACAGATGTTGAATGTCTCATCGACGGTCTGCCTGAGCCC
ATCGACCTGGAGTTAGACCACGCCACAAGGACATTGTACTGGACGGATCG
TGGAGATCCGCCTCGGGGAAACACGGTGAACTCAGTCGATCTTTCCAGTG
CGCCCGTGAATAAGTTGGAACCGAAGATTCTGGTGCGCAAGCTTCATGAG
GGAATTGGAATTGCTTTGGATACCAAGAATAAGCGTATGTTTTTCGGGGA
CCTGGGTGGCTCATTGTACAGTGCCAATTTTGATGGGACATGCAAGTATA
CCATCGTGGCTGATGTTGGGGGTGCAATCACTGGTGTGGCGTATGCTGGG
TAATAGATAGAGTATTATGAAGTTAAGCTAGAAACTGTTGTATATATGCA
CCTATCTAATTTATCATCCTCTGCTGTA back to topCoding sequence (CDS) from alignment at ch2:89905..91032+ >KJC3_001571-T1 ID=KJC3_001571-T1|Name=KJC3_001571-T1|organism=Aspergillus niger KJC3|type=CDS|length=927bp|location=Sequence derived from alignment at ch2:89905..91032+ (Aspergillus niger KJC3)
ATGGCACCTCGACCTGACCCTCCAGCAACGGGACGTGTTTACTTCCTCGA
CATCGGAATCTCAACCTCTGAGCCCAATGGACGTCTTTTGTCCTGCAAGC
CCGATGGCTCCGATTTCCGCGAGCTGATCACTCAACTCAACACCCTGCCC
GACGGTATCGCCATTGACTCTGACCGCCAACACATCTACTGGACAAACAT
GGGAATTCCGTCCGCCGATGATGGATCCATCCAGCGCTGCGATTACTCAG
GGAATAACATCGTCACCATCATCCCAAAGGGATACACCCATACCCCGAAG
CAATTGATCATTGCTCCACGATCTCAGAAGCTGTACTGGTCTGATCGCGA
AGGCCGACGGGTCATGCGAGCGAATCTAGATGGGAGTGAGATCGAGGTAC
TTTACAGGGCCACTTCAAGTGAGGGCACAAACACACCCGCTGTTCTTGAC
TGGTGCGTGGGCATTGCGGTTGACGAGGAGGCACATTCGGTATATTGGAC
ACAGAAAGGGCCATCGAAGGGCAACCTTGGCCGGATCTATCGCATGGGAC
TTGAGATGAGACAGGGTGAATCAGCGGAGTCGCGGACAGATGTTGAATGT
CTCATCGACGGTCTGCCTGAGCCCATCGACCTGGAGTTAGACCACGCCAC
AAGGACATTGTACTGGACGGATCGTGGAGATCCGCCTCGGGGAAACACGG
TGAACTCAGTCGATCTTTCCAGTGCGCCCGTGAATAAGTTGGAACCGAAG
ATTCTGGTGCGCAAGCTTCATGAGGGAATTGGAATTGCTTTGGATACCAA
GAATAAGCGTATGTTTTTCGGGGACCTGGGTGGCTCATTGTACAGTGCCA
ATTTTGATGGGACATGCAAGTATACCATCGTGGCTGATGTTGGGGGTGCA
ATCACTGGTGTGGCGTATGCTGGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001571-T1.utr5p1 | KJC3_001571-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001571-T1.utr3p1 | KJC3_001571-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011042 |
| DBxref | InterPro:IPR000033 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:89905..91032 + |
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