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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:111966..113153+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001580-T1 ID=KJC3_001580-T1|Name=KJC3_001580-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1188bp|location=Sequence derived from alignment at ch2:111966..113153+ (Aspergillus niger KJC3)
CCAGATTCGAAACACCATATGCCTTTCTGAATAGGCAATTGTATGCCGCG
TCTCTACATCATGAGTCCACTACCCAATCTTACTCATGACAGTTATAACA
TCGCGTTCATCTGCCCAACGGGCATCGAGCTCGCCGCCGTCGAGGGAATG
CTGGATGAACTGCACCCAGCCCTCCCTTCCACCATTGACAAGAACAGCTA
TACTTATGGCCGCATGGGAGTACACTATGTAGTAGTGGCAGTATTGCCCG
AAACAGGCAACGACCGGGCCGCATCTGTCGCGACACAACTTAACAACGAC
TTCAGATCTCTCCGATTCGGTTTACTGATCGGGACTGGTGGGGGCATACC
AGACCTTGCAAAAGGTCGAGATATTCGGCTTGGGGATGTGGTGGTCAGCA
AGCCGACTGAAATATTTGGAGGCGTAGTACAACTTGATCGCGGGAAATCT
CATGCTCATGGTCGATTCGAGCGAACGGGGATACAGCAGAAGCCACCGGA
TATTCTCCTGTCTACGGCGCAAAGGTTAGACGCTCTTCATGCGCGCCTTG
ATACTCATATTCCCTTCTTTATGGAGGAAATGCTCGAGAGATATCCAAAG
ATGAAGAACCGGAATTATGTTCATCAGGGAGACGAAAAAGACCAACTGTT
CCGGACGGAGTATGAGCACGCAGGTGGATCAGACTGTGGGCACTGCCACC
CGATCCAGGCCATTGAACGTGTGCCACGAGAGGATTCGACGCCAGCCATT
CACTATGGAACTATCGGGTCTTCCAAGACCCTTCTCAGAGACAGTGTGAG
AAGGGAGATTCTGAAAGCCGACTTCGATATTCTGTGTGTTGAGACGGAAG
CAGCGACGTTGATGAACGAGATCCCTTGTCTGGTAGTCTGTGGCATCAGT
GACTATGCAGATTCACATAGTAACACGACATGGCAGCCATACGCTGCTGC
TACGGCTGCTGCATATGCCAAGGAGTTGCTTTCGCTGATTCCTCCTCTGA
GCAAGCCTTCAAAAGACAACATCGAAGTGGCTCCGTTTGCATCGAAACAG
CAAGCTCCCACTATTCCAACACCTAGAATTAAATACTTGATTCATGATCC
GGTCGCTGGTGATTTAGTAGCTGGAAGGAACTTGTTCAGCAGTGGAATCT
ATCCTGATGGCAAGATGGAAAGGTGCATATATGATTAG back to topCoding sequence (CDS) from alignment at ch2:111966..113153+ >KJC3_001580-T1 ID=KJC3_001580-T1|Name=KJC3_001580-T1|organism=Aspergillus niger KJC3|type=CDS|length=1146bp|location=Sequence derived from alignment at ch2:111966..113153+ (Aspergillus niger KJC3)
ATGCCGCGTCTCTACATCATGAGTCCACTACCCAATCTTACTCATGACAG
TTATAACATCGCGTTCATCTGCCCAACGGGCATCGAGCTCGCCGCCGTCG
AGGGAATGCTGGATGAACTGCACCCAGCCCTCCCTTCCACCATTGACAAG
AACAGCTATACTTATGGCCGCATGGGAGTACACTATGTAGTAGTGGCAGT
ATTGCCCGAAACAGGCAACGACCGGGCCGCATCTGTCGCGACACAACTTA
ACAACGACTTCAGATCTCTCCGATTCGGTTTACTGATCGGGACTGGTGGG
GGCATACCAGACCTTGCAAAAGGTCGAGATATTCGGCTTGGGGATGTGGT
GGTCAGCAAGCCGACTGAAATATTTGGAGGCGTAGTACAACTTGATCGCG
GGAAATCTCATGCTCATGGTCGATTCGAGCGAACGGGGATACAGCAGAAG
CCACCGGATATTCTCCTGTCTACGGCGCAAAGGTTAGACGCTCTTCATGC
GCGCCTTGATACTCATATTCCCTTCTTTATGGAGGAAATGCTCGAGAGAT
ATCCAAAGATGAAGAACCGGAATTATGTTCATCAGGGAGACGAAAAAGAC
CAACTGTTCCGGACGGAGTATGAGCACGCAGGTGGATCAGACTGTGGGCA
CTGCCACCCGATCCAGGCCATTGAACGTGTGCCACGAGAGGATTCGACGC
CAGCCATTCACTATGGAACTATCGGGTCTTCCAAGACCCTTCTCAGAGAC
AGTGTGAGAAGGGAGATTCTGAAAGCCGACTTCGATATTCTGTGTGTTGA
GACGGAAGCAGCGACGTTGATGAACGAGATCCCTTGTCTGGTAGTCTGTG
GCATCAGTGACTATGCAGATTCACATAGTAACACGACATGGCAGCCATAC
GCTGCTGCTACGGCTGCTGCATATGCCAAGGAGTTGCTTTCGCTGATTCC
TCCTCTGAGCAAGCCTTCAAAAGACAACATCGAAGTGGCTCCGTTTGCAT
CGAAACAGCAAGCTCCCACTATTCCAACACCTAGAATTAAATACTTGATT
CATGATCCGGTCGCTGGTGATTTAGTAGCTGGAAGGAACTTGTTCAGCAG
TGGAATCTATCCTGATGGCAAGATGGAAAGGTGCATATATGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009116 | nucleoside metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001580-T1.utr5p1 | KJC3_001580-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035994 |
| DBxref | InterPro:IPR000845 |
| DBxref | PFAM:PF01048 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:111966..113153 + |
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