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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:113407..115198- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001581-T1 ID=KJC3_001581-T1|Name=KJC3_001581-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1792bp|location=Sequence derived from alignment at ch2:113407..115198- (Aspergillus niger KJC3)
TGCAATTCATCCATTCCCTTGACCCATGCCTCATAATGGTCGATCGTCTG
CATTCTAATATCATCAAGCTTCTCACCCAGCTGTCATGAGATCACTGCCG
GACAGATCGGTGGATCGCGACCGGTCGGATTCTCCTCCATGACAGCCGCC
GGTCCGTGGTTCCTTGACTGGTCCACCCAATCGGTACTGTCTGCTTGACT
GCTTGTCCCTCACTACTTGCTCACGGCTACTCACGTCTTCTACTCACTAC
TGTGAATGACCACGGAATCTGGCCCGGGATGGTCGGATCAAGCCCGATGT
TCGCCAGCATATGTGATTTGCTCGTTCCCCGCACGCTGGCAACTCGCCTC
GCATCACCCTCCCCGCTCCCATCGGCACTCAAGAAACAGCTATTTAGACT
CCAGCTTCGACTGGGCAGAGGGGTAGTTTAGCAGCTCGGGAACTTTTGTG
CTGTCACACTTGTAACCACGATAATGACGGCCTCGACGGAAGATATTTCG
CCCTTTTCGGTGGAAGGGAAGACGGCCATTGTCACGGGCGCTGGCTCGGG
TTAGTCTCCTCTCCTTCCCTTCGCTTGACAGTCTTCTGATGGTGATAGGG
ATCAATCTGTCATTTGCATCTCTTCTACTATCCCGGAATTGCAATGTAGT
GGTGGCCGACATCGCATTGCGACCAGAAGCCGAGCAACTCATTGCCAAGT
ATGAGGCCGCCGATTCCTCCCCGCGAGCAGTTTTCATTCGCACAGACGTC
ACCTCTTGGGCAGACCTGAATCGCATGTTCGATTTGACCTTGTCCTTGTT
CGAAGAATTCCATATCCTCTGTCCTGGGGCTGGGGTCTACGAGCCCCCGT
GGTCAAATTTCTGGCAGCCACCCGGTTCCGCGATCAGCAAAGACAAGGAC
GACAGCGACCGGTACGCTCTACTGGATATCAACGTCACGCATCCGATCCG
AACGACCCAACTGGCCTTGTCGCACTGGTTGCATCCGACGAGCCCCAACG
TGACTCCTGTCTCCCCGCAGAATCCCCGCCGCGTTATTCACATCTCCTCC
GTGGCAGCCCAACTGCCGAACGTTGTGTGTCCCATGTATGGCGCTTCAAA
GGCCGCCATTACCGGCTTTGTGCGATGTCTAGCCCCCCTCGAACAAGCCA
TTGGCGTCCGCGTCAATGCAGTGGCCCCCGGTCTCATACGTACGCCATTG
TGGGTTGAAAATCAGGAGAAGTTGATGCTTATCGACCAGGAGAAGGATGG
ATGGGCAACGCCCGAAGAGGTCGCCTCAGCCATGCTACGATGCATGGAAG
AGAAGGAGCTTGAGGGTGGAACAATCCTAGAAGTTGTTCGCAACTCAACC
CGACGCGTCGAGACGCTCAATGACCCAGGTCCCGCCAGGGCGGCTGGGGA
TGCCTCCATTGCCAGCAAGAATCAGCAGGGGGTGGACCAACTCCTCGAAT
TCCTGAAGCAGAAGGATATATGGGCCCCACAACAGCGGTCGACGTAGTAT
GTTAATGCTATATTTGCTTTCTTTGTTGAGTATACTCATGTAGGGGGGCA
AGAGTCTTGTGAAGCCCTCGATGGAACCGCGCCTCGTGAACAATCAAATG
GGATATGACGATGAGGTGATAGCTACGTCCATAAACAAATCCGTCTAGTT
TGGTGTTATATTGTCTAGGAGTTACCAGTTTTATTTCATACTGCACACAA
CATAGCAGCAGCCGTCAATATCACGAATCTTATAGTGTTATAGGACTTCT
TAGAATGCAAGATTGCGGAACGATGGTAATCTTTACTCAAGG back to topCoding sequence (CDS) from alignment at ch2:113407..115198- >KJC3_001581-T1 ID=KJC3_001581-T1|Name=KJC3_001581-T1|organism=Aspergillus niger KJC3|type=CDS|length=1950bp|location=Sequence derived from alignment at ch2:113407..115198- (Aspergillus niger KJC3)
GGATCAATCTGTCATTTGCATCTCTTCTACTATCCCGGAATTGCAATGTA
GTGGTGGCCGACATCGCATTGCGACCAGAAGCCGAGCAACTCATTGCCAA
GTATGAGGCCGCCGATTCCTCCCCGCGAGCAGTTTTCATTCGCACAGACG
TCACCTCTTGGGCAGACCTGAATCGCATGTTCGATTTGACCTTGTCCTTG
TTCGAAGAATTCCATATCCTCTGTCCTGGGGCTGGGGTCTACGAGCCCCC
GTGGTCAAATTTCTGGCAGCCACCCGGTTCCGCGATCAGCAAAGACAAGG
ACGACAGCGACCGGTACGCTCTACTGGATATCAACGTCACGCATCCGATC
CGAACGACCCAACTGGCCTTGTCGCACTGGTTGCATCCGACGAGCCCCAA
CGTGACTCCTGTCTCCCCGCAGAATCCCCGCCGCGTTATTCACATCTCCT
CCGTGGCAGCCCAACTGCCGAACGTTGTGTGTCCCATGTATGGCGCTTCA
AAGGCCGCCATTACCGGCTTTGTGCGATGTCTAGCCCCCCTCGAACAAGC
CATTGGCGTCCGCGTCAATGCAGTGGCCCCCGGTCTCATACGTACGCCAT
TGTGGGTTGAAAATCAGGAGAAGTTGATGCTTATCGACCAGGAGAAGGAT
GGATGGGCAACGCCCGAAGAGGTCGCCTCAGCCATGCTACGATGCATGGA
AGAGAAGGAGCTTGAGGGTGGAACAATCCTAGAAGTTGTTCGCAACTCAA
CCCGACGCGTCGAGACGCTCAATGACCCAGGTCCCGCCAGGGCGGCTGGG
GATGCCTCCATTGCCAGCAAGAATCAGCAGGGGGTGGACCAACTCCTCGA
ATTCCTGAAGCAGAAGGATATATGGGCCCCACAACAGCGGTCGACGTAGA
TGACGGCCTCGACGGAAGATATTTCGCCCTTTTCGGTGGAAGGGAAGACG
GCCATTGTCACGGGCGCTGGCTCGGGGATCAATCTGTCATTTGCATCTCT
TCTACTATCCCGGAATTGCAATGTAGTGGTGGCCGACATCGCATTGCGAC
CAGAAGCCGAGCAACTCATTGCCAAGTATGAGGCCGCCGATTCCTCCCCG
CGAGCAGTTTTCATTCGCACAGACGTCACCTCTTGGGCAGACCTGAATCG
CATGTTCGATTTGACCTTGTCCTTGTTCGAAGAATTCCATATCCTCTGTC
CTGGGGCTGGGGTCTACGAGCCCCCGTGGTCAAATTTCTGGCAGCCACCC
GGTTCCGCGATCAGCAAAGACAAGGACGACAGCGACCGGTACGCTCTACT
GGATATCAACGTCACGCATCCGATCCGAACGACCCAACTGGCCTTGTCGC
ACTGGTTGCATCCGACGAGCCCCAACGTGACTCCTGTCTCCCCGCAGAAT
CCCCGCCGCGTTATTCACATCTCCTCCGTGGCAGCCCAACTGCCGAACGT
TGTGTGTCCCATGTATGGCGCTTCAAAGGCCGCCATTACCGGCTTTGTGC
GATGTCTAGCCCCCCTCGAACAAGCCATTGGCGTCCGCGTCAATGCAGTG
GCCCCCGGTCTCATACGTACGCCATTGTGGGTTGAAAATCAGGAGAAGTT
GATGCTTATCGACCAGGAGAAGGATGGATGGGCAACGCCCGAAGAGGTCG
CCTCAGCCATGCTACGATGCATGGAAGAGAAGGAGCTTGAGGGTGGAACA
ATCCTAGAAGTTGTTCGCAACTCAACCCGACGCGTCGAGACGCTCAATGA
CCCAGGTCCCGCCAGGGCGGCTGGGGATGCCTCCATTGCCAGCAAGAATC
AGCAGGGGGTGGACCAACTCCTCGAATTCCTGAAGCAGAAGGATATATGG
GCCCCACAACAGCGGTCGACGTAGATGACGGCCTCGACGGAAGATATTTC
GCCCTTTTCGGTGGAAGGGAAGACGGCCATTGTCACGGGCGCTGGCTCGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001581-T1.utr3p1 | KJC3_001581-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001581-T1.utr5p1 | KJC3_001581-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:113407..115198 - |
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