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KJC3_001582-T1, KJC3_001582-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001582-T1
Unique NameKJC3_001582-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:115631..117547-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001582-T1 ID=KJC3_001582-T1|Name=KJC3_001582-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1917bp|location=Sequence derived from alignment at ch2:115631..117547- (Aspergillus niger KJC3)
ATGGGAACGCAACGGCCCCCCGACACGCACGAAAGAACTGACTCGGAGAA
AGACGATGGGATCCTCCAGCCTTTCCAGCGCCCTAGCGGCTTGGCGGCAG
CAAATGAATCTGGTCATGCTCTGACTTGGGACTCTCCATCCTGCATCTCC
TTGTCCACTCGTCGCCATACTGTCCGTCTCCTTCATCTTGTTTCCTCCAA
GTCTCTCTCCATCAGTCATCTCCCGTGAGCGGCTCTTGATGCGCCTCACC
TTATCACCGCCCCCCTTTGGTCCATCCGCGTCTTTTGTCCGAGCATCTTC
GCGACTGCCAAAACCTCCCCTCTTCCCCTCTCCTCTAGTAACACGATTGT
TGGCCGTTATCTCCTCACATCTCGGATTATTAATTCATCGGAGCCCCTCG
GGTTTTAAGTTCTTCCTTTCCACCTTTCCACGCCCAATTCACCCGGCGAT
TGACAAGAACTATCCCTCCGCATCTCCGACGCTTTGTTATTTCTGCCCCT
GTCAAGGTTTTGGGGGATCCGCGGGAAGTCCGCCCTCCGTACATCGATGG
ATGTTTCGCTCTCTCCTTCGTATCTGAAGGCGTTCAGGGCTCTGTTGAAA
AGGTATCGGAAGCAAGGACATGCTGATGCAGCTACTGAGCTAGAGACGGT
GGTGGAGCAGGTCTCCAGTGAGAACCGGGGAGACTCGGGCGTCGCGCTGA
AGCGCTTCGAGGCGCTGGTCCTCGCCTTCCTTGAGCGAGGTCAGTGGAAC
TCGGCCGTAGATGTCGGAACGATTGTGGTCGATGCCCGACGGGCGCAGCT
AGGTCCCAACGATCCCATCACCATGGCTGCGGTCCACAACTTGGTATCGG
GGTACTGTGGCCAGGGCCGTTGGACGGAAGCGATTGATCTGGGTCGCCAG
GTCACAGAGGCCCGTCGCAAGGTCCTGGGAGAGGATCACTCCCACACGAT
GGCCTCCATGTCCAACTTGGCTACCGCATATCGGAGGGAGGGGCATTGGC
GACAATCCGAGGCGCTCGAACTTCGTCTGCTGCAGATCAAGACGCGAAGA
TTCGGCCAGGACAACCAATCTACCCTCACGTCCATGGGCAACCTGGCCAA
CACGTACACTCACATGGGGCGATATGATGATGCAGAACGACTGGAGAAGA
GGGTAGTGGAACAATGTACACGTGCGATGGGTGAGCACCATGGGTCCACC
TTGATGTGGAAGTCGAACCTGGCAGCCACGTATCGAGAGCAGGGTCGATT
GGAGGAAGCCTTGAAGTTGGAGTCGGAAGTGATGGAGATCCGGATCGAGC
GACTCGGAACCCACCACCCGTTGACGCTGACATCCATGGCGAACCTTGCA
ACGATGTACCGGGACCAGGGGCGATTGGAGGACGCAGAACATCTGGAGAC
GCAGGTCGTAGAGATAAGCAAGATCGAGCTAGGGGAGCAGCATCCGCAGA
CCCTGATGTCGATGATCAACTTGGCGTCCACCTACCGGGGCCAGGATCGC
ATGGAAGAGGCCGCCAGTCTCGGGGCACGAGCGGTGGCTGTGATGAAGTC
ACGCCTGGGTGAGCAGAACCCGTTAACCCTGACTGCCATGGCGGATCTCG
CCTTGACCTACCAGGGTCAAGGCAAGACAGGGAGCGCCGAAGCATTGACC
GCACAGGTGCTGCGTCTGATGCAGAAGAACCTCGGACCGCTCCATCCCCA
CACACTGACGACCATGGCCAACCTGGGGGCCATCTACCAGTCACAGGGCC
GCTGGGATGAAGCCGAGGCGCTGGCGGAGCAAGCGGTGCGTGGCCGGGAG
AAGGTCTTGGGGAAAACGCACCCGGACACGCAGGCGTCGATGGAAGATCT
GCTGCGCGTGTATCGAGTGTTGGCGGCGGATCGCACGACGGGAATACACA
TGCGTCATACCCAATAG
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Coding sequence (CDS) from alignment at ch2:115631..117547-

>KJC3_001582-T1 ID=KJC3_001582-T1|Name=KJC3_001582-T1|organism=Aspergillus niger KJC3|type=CDS|length=3108bp|location=Sequence derived from alignment at ch2:115631..117547- (Aspergillus niger KJC3)
GGCTCTGTTGAAAAGGTATCGGAAGCAAGGACATGCTGATGCAGCTACTG
AGCTAGAGACGGTGGTGGAGCAGGTCTCCAGTGAGAACCGGGGAGACTCG
GGCGTCGCGCTGAAGCGCTTCGAGGCGCTGGTCCTCGCCTTCCTTGAGCG
AGGTCAGTGGAACTCGGCCGTAGATGTCGGAACGATTGTGGTCGATGCCC
GACGGGCGCAGCTAGGTCCCAACGATCCCATCACCATGGCTGCGGTCCAC
AACTTGGTATCGGGGTACTGTGGCCAGGGCCGTTGGACGGAAGCGATTGA
TCTGGGTCGCCAGGTCACAGAGGCCCGTCGCAAGGTCCTGGGAGAGGATC
ACTCCCACACGATGGCCTCCATGTCCAACTTGGCTACCGCATATCGGAGG
GAGGGGCATTGGCGACAATCCGAGGCGCTCGAACTTCGTCTGCTGCAGAT
CAAGACGCGAAGATTCGGCCAGGACAACCAATCTACCCTCACGTCCATGG
GCAACCTGGCCAACACGTACACTCACATGGGGCGATATGATGATGCAGAA
CGACTGGAGAAGAGGGTAGTGGAACAATGTACACGTGCGATGGGTGAGCA
CCATGGGTCCACCTTGATGTGGAAGTCGAACCTGGCAGCCACGTATCGAG
AGCAGGGTCGATTGGAGGAAGCCTTGAAGTTGGAGTCGGAAGTGATGGAG
ATCCGGATCGAGCGACTCGGAACCCACCACCCGTTGACGCTGACATCCAT
GGCGAACCTTGCAACGATGTACCGGGACCAGGGGCGATTGGAGGACGCAG
AACATCTGGAGACGCAGGTCGTAGAGATAAGCAAGATCGAGCTAGGGGAG
CAGCATCCGCAGACCCTGATGTCGATGATCAACTTGGCGTCCACCTACCG
GGGCCAGGATCGCATGGAAGAGGCCGCCAGTCTCGGGGCACGAGCGGTGG
CTGTGATGAAGTCACGCCTGGGTGAGCAGAACCCGTTAACCCTGACTGCC
ATGGCGGATCTCGCCTTGACCTACCAGGGTCAAGGCAAGACAGGGAGCGC
CGAAGCATTGACCGCACAGGTGCTGCGTCTGATGCAGAAGAACCTCGGAC
CGCTCCATCCCCACACACTGACGACCATGGCCAACCTGGGGGCCATCTAC
CAGTCACAGGGCCGCTGGGATGAAGCCGAGGCGCTGGCGGAGCAAGCGGT
GCGTGGCCGGGAGAAGGTCTTGGGGAAAACGCACCCGGACACGCAGGCGT
CGATGGAAGATCTGCTGCGCGTGTATCGAGTGTTGGCGGCGGATCGCACG
ACGGGAATACACATGCGTCATACCCAATAGATGGGAACGCAACGGCCCCC
CGACACGCACGAAAGAACTGACTCGGAGAAAGACGATGGGATCCTCCAGC
CTTTCCAGCGCCCTAGCGGCTTGGCGGCAGCAAATGAATCTGGTCATGCT
CTGACTTGGGACTCTCCATCCTGCATCTCCTTGTCCACTCGTCGCCATAC
TGTCCGTCTCCTTCATCTTGTTTCCTCCAAGTCTCTCTCCATCAGTCATC
TCCCGGCTCTGTTGAAAAGGTATCGGAAGCAAGGACATGCTGATGCAGCT
ACTGAGCTAGAGACGGTGGTGGAGCAGGTCTCCAGTGAGAACCGGGGAGA
CTCGGGCGTCGCGCTGAAGCGCTTCGAGGCGCTGGTCCTCGCCTTCCTTG
AGCGAGGTCAGTGGAACTCGGCCGTAGATGTCGGAACGATTGTGGTCGAT
GCCCGACGGGCGCAGCTAGGTCCCAACGATCCCATCACCATGGCTGCGGT
CCACAACTTGGTATCGGGGTACTGTGGCCAGGGCCGTTGGACGGAAGCGA
TTGATCTGGGTCGCCAGGTCACAGAGGCCCGTCGCAAGGTCCTGGGAGAG
GATCACTCCCACACGATGGCCTCCATGTCCAACTTGGCTACCGCATATCG
GAGGGAGGGGCATTGGCGACAATCCGAGGCGCTCGAACTTCGTCTGCTGC
AGATCAAGACGCGAAGATTCGGCCAGGACAACCAATCTACCCTCACGTCC
ATGGGCAACCTGGCCAACACGTACACTCACATGGGGCGATATGATGATGC
AGAACGACTGGAGAAGAGGGTAGTGGAACAATGTACACGTGCGATGGGTG
AGCACCATGGGTCCACCTTGATGTGGAAGTCGAACCTGGCAGCCACGTAT
CGAGAGCAGGGTCGATTGGAGGAAGCCTTGAAGTTGGAGTCGGAAGTGAT
GGAGATCCGGATCGAGCGACTCGGAACCCACCACCCGTTGACGCTGACAT
CCATGGCGAACCTTGCAACGATGTACCGGGACCAGGGGCGATTGGAGGAC
GCAGAACATCTGGAGACGCAGGTCGTAGAGATAAGCAAGATCGAGCTAGG
GGAGCAGCATCCGCAGACCCTGATGTCGATGATCAACTTGGCGTCCACCT
ACCGGGGCCAGGATCGCATGGAAGAGGCCGCCAGTCTCGGGGCACGAGCG
GTGGCTGTGATGAAGTCACGCCTGGGTGAGCAGAACCCGTTAACCCTGAC
TGCCATGGCGGATCTCGCCTTGACCTACCAGGGTCAAGGCAAGACAGGGA
GCGCCGAAGCATTGACCGCACAGGTGCTGCGTCTGATGCAGAAGAACCTC
GGACCGCTCCATCCCCACACACTGACGACCATGGCCAACCTGGGGGCCAT
CTACCAGTCACAGGGCCGCTGGGATGAAGCCGAGGCGCTGGCGGAGCAAG
CGGTGCGTGGCCGGGAGAAGGTCTTGGGGAAAACGCACCCGGACACGCAG
GCGTCGATGGAAGATCTGCTGCGCGTGTATCGAGTGTTGGCGGCGGATCG
CACGACGGGAATACACATGCGTCATACCCAATAGATGGGAACGCAACGGC
CCCCCGACACGCACGAAAGAACTGACTCGGAGAAAGACGATGGGATCCTC
CAGCCTTTCCAGCGCCCTAGCGGCTTGGCGGCAGCAAATGAATCTGGTCA
TGCTCTGACTTGGGACTCTCCATCCTGCATCTCCTTGTCCACTCGTCGCC
ATACTGTCCGTCTCCTTCATCTTGTTTCCTCCAAGTCTCTCTCCATCAGT
CATCTCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001582KJC3_001582Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001582-T1KJC3_001582-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001582-T1.cdsKJC3_001582-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001582-T1.exon2KJC3_001582-T1.exon2Aspergillus niger KJC3exon
KJC3_001582-T1.exon1KJC3_001582-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefPFAM:PF13176
DBxrefPFAM:PF07721
DBxrefPFAM:PF13424
DBxrefPFAM:PF13374
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:115631..117547 -
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