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KJC3_001585-T1, KJC3_001585-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001585-T1
Unique NameKJC3_001585-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:119607..121227-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001585-T1 ID=KJC3_001585-T1|Name=KJC3_001585-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1621bp|location=Sequence derived from alignment at ch2:119607..121227- (Aspergillus niger KJC3)
ATCAGCTGAACCAAAAAAGAGCCTCTGAAGCGCCGCCTGTTGCTCAGAAG
AAGCAAAAGCCTCTTGATCTATCCCAACCCGTGAGGAACATCTTTCTTGG
AAATGCCTACTGTGAGGCACCGCCACCATTATTCTTCAACCATGGAGGGT
CCCTCTGGCATATCGGCAGAATCGGATCCCCCTACGCCGCCTCCCAGTGA
GCGCGCATCTTCGCCGACCGCGCCCCTCCACGGGCGCACCAATCCTTTCC
ACATGGTCATTATGAGAATCGGTAGCCACCCTGTCTTGAAAGCACTCGCT
GGATTTGTGCTCCTGGGACTCCTCTCAGGCTTTCTGGGATGGCCCAGGCA
GTTGGTCTTCTGGGTGAATCTGGTCGCCTTAGTTCCGCTGATGGCCATCA
TCACCATTGCTATCACCGAGCTGTCCCATACGCTGGGCCCGTTCTTTCAC
GAGCTCCTGAAGTCGACCCTGGGTAACTCGGTCGAATTGATGGTTGGGCT
TGTGTCTGCGCAAATGGGTCAAGGGCGTATCTTCCACTCAGTTGTGGTTG
GAAGTATCCTGTGTTATTCTCTCCTGGTAGGCGATTAGTTTTGTTGTTAG
GCCGCTTGGATCACGTTGGTTGACTATTAGAATATAGGTGCTGGGTAGCT
GTTTCTTGATCTCTGGCTACGACAAGGAACATCTACACTTTGATCGCACC
TTGACTAGCATCATGTCGTCGTTGATGATGATGGTATGCATTTCTTTGGT
GCTTCCCGGCGTCATGGTCACGTTTCCGTCGTTGGATACCCTCTCCATCA
GCGCCGTAGTGACCAGCCATGAGGTTCAGATGGTCTCGTATGGGATTGCT
CTCATCTTGCTGGGTCTATTCGGTGTCTTTCTCCTCTTTCAACTCAAGTC
CCATGCTGCATTATTTCGCATTGCCGAGGGGGCAGCTGAGTCGCACTGGA
ACGATGCTAGCAGTGAAAACCGGGCGGATGAGAACCCAATGCCGACTGTT
CATGAACTGGTCATGTTCACGCCCCGATCGGCGGGAGTTGCTCTCCTGGT
TGGCGTGGCGTGCTTGACGGGGTGTGTTGTGCACATTGTGAACAGCGTCA
ATGCTGCGCTAGAGCGGGGAACGGGCACCAGCTTCCCCATTCTGGTTTGG
GTGCCTCTGGTGGGGAACGTGACCAAGTACCTGACCATCGTGATCATCTC
GCGCCAGGGCCATGTGGAGGTCGCCGTCCGAAACATCTTGAATAGCGTTC
TGCGCCTCACCCTGTTGGTCACGCCAACTCTGGTTCTCTTGGGGTGGTCG
CTGGGCCAATCGGTGACTCTGCAGATGGATAATTTCGAAGCGACGATGTT
GTTCCTCGCCGCTATGGTTATGAGCCACGTGATTCACGAAGGTCGGGCCA
ACTACTTTGATGGCCTCATGCTGTGCGGAACGTGAGTACATCCCAGACTG
ATAACCATACGTTGGCCCTTGTCAGTTTTACGACACTACTAACAAAAACA
TAGGTACGTCATTACTGGAGTGGCCTTTTATGTGTGTCCCAGTGTGAGCA
CCATCAAGGACGTCGCGGTCGTAAACACATGATATTGAGTCCTATGCATT
ATCAACGTGGTTTATGTAGAT
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Coding sequence (CDS) from alignment at ch2:119607..121227-

>KJC3_001585-T1 ID=KJC3_001585-T1|Name=KJC3_001585-T1|organism=Aspergillus niger KJC3|type=CDS|length=4041bp|location=Sequence derived from alignment at ch2:119607..121227- (Aspergillus niger KJC3)
GTACGTCATTACTGGAGTGGCCTTTTATGTGTGTCCCAGTGTGAGCACCA
TCAAGGACGTCGCGGTCGTAAACACATGAGTGCTGGGTAGCTGTTTCTTG
ATCTCTGGCTACGACAAGGAACATCTACACTTTGATCGCACCTTGACTAG
CATCATGTCGTCGTTGATGATGATGGTATGCATTTCTTTGGTGCTTCCCG
GCGTCATGGTCACGTTTCCGTCGTTGGATACCCTCTCCATCAGCGCCGTA
GTGACCAGCCATGAGGTTCAGATGGTCTCGTATGGGATTGCTCTCATCTT
GCTGGGTCTATTCGGTGTCTTTCTCCTCTTTCAACTCAAGTCCCATGCTG
CATTATTTCGCATTGCCGAGGGGGCAGCTGAGTCGCACTGGAACGATGCT
AGCAGTGAAAACCGGGCGGATGAGAACCCAATGCCGACTGTTCATGAACT
GGTCATGTTCACGCCCCGATCGGCGGGAGTTGCTCTCCTGGTTGGCGTGG
CGTGCTTGACGGGGTGTGTTGTGCACATTGTGAACAGCGTCAATGCTGCG
CTAGAGCGGGGAACGGGCACCAGCTTCCCCATTCTGGTTTGGGTGCCTCT
GGTGGGGAACGTGACCAAGTACCTGACCATCGTGATCATCTCGCGCCAGG
GCCATGTGGAGGTCGCCGTCCGAAACATCTTGAATAGCGTTCTGCGCCTC
ACCCTGTTGGTCACGCCAACTCTGGTTCTCTTGGGGTGGTCGCTGGGCCA
ATCGGTGACTCTGCAGATGGATAATTTCGAAGCGACGATGTTGTTCCTCG
CCGCTATGGTTATGAGCCACGTGATTCACGAAGGTCGGGCCAACTACTTT
GATGGCCTCATGCTGTGCGGAACATGCCTACTGTGAGGCACCGCCACCAT
TATTCTTCAACCATGGAGGGTCCCTCTGGCATATCGGCAGAATCGGATCC
CCCTACGCCGCCTCCCAGTGAGCGCGCATCTTCGCCGACCGCGCCCCTCC
ACGGGCGCACCAATCCTTTCCACATGGTCATTATGAGAATCGGTAGCCAC
CCTGTCTTGAAAGCACTCGCTGGATTTGTGCTCCTGGGACTCCTCTCAGG
CTTTCTGGGATGGCCCAGGCAGTTGGTCTTCTGGGTGAATCTGGTCGCCT
TAGTTCCGCTGATGGCCATCATCACCATTGCTATCACCGAGCTGTCCCAT
ACGCTGGGCCCGTTCTTTCACGAGCTCCTGAAGTCGACCCTGGGTAACTC
GGTCGAATTGATGGTTGGGCTTGTGTCTGCGCAAATGGGTCAAGGGCGTA
TCTTCCACTCAGTTGTGGTTGGAAGTATCCTGTGTTATTCTCTCCTGGTA
CGTCATTACTGGAGTGGCCTTTTATGTGTGTCCCAGTGTGAGCACCATCA
AGGACGTCGCGGTCGTAAACACATGAGTGCTGGGTAGCTGTTTCTTGATC
TCTGGCTACGACAAGGAACATCTACACTTTGATCGCACCTTGACTAGCAT
CATGTCGTCGTTGATGATGATGGTATGCATTTCTTTGGTGCTTCCCGGCG
TCATGGTCACGTTTCCGTCGTTGGATACCCTCTCCATCAGCGCCGTAGTG
ACCAGCCATGAGGTTCAGATGGTCTCGTATGGGATTGCTCTCATCTTGCT
GGGTCTATTCGGTGTCTTTCTCCTCTTTCAACTCAAGTCCCATGCTGCAT
TATTTCGCATTGCCGAGGGGGCAGCTGAGTCGCACTGGAACGATGCTAGC
AGTGAAAACCGGGCGGATGAGAACCCAATGCCGACTGTTCATGAACTGGT
CATGTTCACGCCCCGATCGGCGGGAGTTGCTCTCCTGGTTGGCGTGGCGT
GCTTGACGGGGTGTGTTGTGCACATTGTGAACAGCGTCAATGCTGCGCTA
GAGCGGGGAACGGGCACCAGCTTCCCCATTCTGGTTTGGGTGCCTCTGGT
GGGGAACGTGACCAAGTACCTGACCATCGTGATCATCTCGCGCCAGGGCC
ATGTGGAGGTCGCCGTCCGAAACATCTTGAATAGCGTTCTGCGCCTCACC
CTGTTGGTCACGCCAACTCTGGTTCTCTTGGGGTGGTCGCTGGGCCAATC
GGTGACTCTGCAGATGGATAATTTCGAAGCGACGATGTTGTTCCTCGCCG
CTATGGTTATGAGCCACGTGATTCACGAAGGTCGGGCCAACTACTTTGAT
GGCCTCATGCTGTGCGGAACATGCCTACTGTGAGGCACCGCCACCATTAT
TCTTCAACCATGGAGGGTCCCTCTGGCATATCGGCAGAATCGGATCCCCC
TACGCCGCCTCCCAGTGAGCGCGCATCTTCGCCGACCGCGCCCCTCCACG
GGCGCACCAATCCTTTCCACATGGTCATTATGAGAATCGGTAGCCACCCT
GTCTTGAAAGCACTCGCTGGATTTGTGCTCCTGGGACTCCTCTCAGGCTT
TCTGGGATGGCCCAGGCAGTTGGTCTTCTGGGTGAATCTGGTCGCCTTAG
TTCCGCTGATGGCCATCATCACCATTGCTATCACCGAGCTGTCCCATACG
CTGGGCCCGTTCTTTCACGAGCTCCTGAAGTCGACCCTGGGTAACTCGGT
CGAATTGATGGTTGGGCTTGTGTCTGCGCAAATGGGTCAAGGGCGTATCT
TCCACTCAGTTGTGGTTGGAAGTATCCTGTGTTATTCTCTCCTGGTACGT
CATTACTGGAGTGGCCTTTTATGTGTGTCCCAGTGTGAGCACCATCAAGG
ACGTCGCGGTCGTAAACACATGAGTGCTGGGTAGCTGTTTCTTGATCTCT
GGCTACGACAAGGAACATCTACACTTTGATCGCACCTTGACTAGCATCAT
GTCGTCGTTGATGATGATGGTATGCATTTCTTTGGTGCTTCCCGGCGTCA
TGGTCACGTTTCCGTCGTTGGATACCCTCTCCATCAGCGCCGTAGTGACC
AGCCATGAGGTTCAGATGGTCTCGTATGGGATTGCTCTCATCTTGCTGGG
TCTATTCGGTGTCTTTCTCCTCTTTCAACTCAAGTCCCATGCTGCATTAT
TTCGCATTGCCGAGGGGGCAGCTGAGTCGCACTGGAACGATGCTAGCAGT
GAAAACCGGGCGGATGAGAACCCAATGCCGACTGTTCATGAACTGGTCAT
GTTCACGCCCCGATCGGCGGGAGTTGCTCTCCTGGTTGGCGTGGCGTGCT
TGACGGGGTGTGTTGTGCACATTGTGAACAGCGTCAATGCTGCGCTAGAG
CGGGGAACGGGCACCAGCTTCCCCATTCTGGTTTGGGTGCCTCTGGTGGG
GAACGTGACCAAGTACCTGACCATCGTGATCATCTCGCGCCAGGGCCATG
TGGAGGTCGCCGTCCGAAACATCTTGAATAGCGTTCTGCGCCTCACCCTG
TTGGTCACGCCAACTCTGGTTCTCTTGGGGTGGTCGCTGGGCCAATCGGT
GACTCTGCAGATGGATAATTTCGAAGCGACGATGTTGTTCCTCGCCGCTA
TGGTTATGAGCCACGTGATTCACGAAGGTCGGGCCAACTACTTTGATGGC
CTCATGCTGTGCGGAACATGCCTACTGTGAGGCACCGCCACCATTATTCT
TCAACCATGGAGGGTCCCTCTGGCATATCGGCAGAATCGGATCCCCCTAC
GCCGCCTCCCAGTGAGCGCGCATCTTCGCCGACCGCGCCCCTCCACGGGC
GCACCAATCCTTTCCACATGGTCATTATGAGAATCGGTAGCCACCCTGTC
TTGAAAGCACTCGCTGGATTTGTGCTCCTGGGACTCCTCTCAGGCTTTCT
GGGATGGCCCAGGCAGTTGGTCTTCTGGGTGAATCTGGTCGCCTTAGTTC
CGCTGATGGCCATCATCACCATTGCTATCACCGAGCTGTCCCATACGCTG
GGCCCGTTCTTTCACGAGCTCCTGAAGTCGACCCTGGGTAACTCGGTCGA
ATTGATGGTTGGGCTTGTGTCTGCGCAAATGGGTCAAGGGCGTATCTTCC
ACTCAGTTGTGGTTGGAAGTATCCTGTGTTATTCTCTCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001585KJC3_001585Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001585-T1KJC3_001585-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001585-T1.cdsKJC3_001585-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001585-T1.utr3p1KJC3_001585-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001585-T1.exon3KJC3_001585-T1.exon3Aspergillus niger KJC3exon
KJC3_001585-T1.exon2KJC3_001585-T1.exon2Aspergillus niger KJC3exon
KJC3_001585-T1.exon1KJC3_001585-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001585-T1.utr5p1KJC3_001585-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004837
DBxrefPFAM:PF01699
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:119607..121227 -
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