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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:127575..129588- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001588-T1 ID=KJC3_001588-T1|Name=KJC3_001588-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2014bp|location=Sequence derived from alignment at ch2:127575..129588- (Aspergillus niger KJC3)
CCCGGATTGCTTGCCCTTTTCAGCCAGCAATCTCAAATACTCGTCCATCC
CATTCGTGTAGCTTCGTCCAAGCACCTGCCCGACATCCTCGTGAGATCTA
TCCCACTGGTCTGGGACAGTGCGCAGGACGCCATCTGTCCCTAGTCTGGG
GCTCGATCGCCACTATGTCGCCCTCCAAGCAGTCTGGTATGTGCGTCGTC
TCCATACCAAGTTTTCCTCGCTTCTTCTGTAGCCCAATGAATGCCTCTCT
TACCTCTTCCGTACTATAGTCGCCATGGCGGACATGCCCTTCATCGTCTC
CACCGGCACCAAGAAGGTCGATCCCCGTACCCGCAAACTCATTCGCAGCC
ATGTCATGATTGGCAAAAACCGTGGCAAATCCCGCTATCGCCAAGCAGAA
GCCGATCCATCGACACCGGCGGACACGAGCACAGACGATACTTCGGCTCC
TCCTGCCGATGGGGCGGGTTCATCATCCACATCGCCTGCGGCACAAGTGC
CAGCCACCCGCTTGCCGTTAAATCTTCCCCGCAGAGTCGGCAACGACATG
TCCCTCATCCGGCTGGCTGATGACACCACTAGCCCAGCAGCCCTAGCCAC
TATTCTTCGCTGTAGGTGCCGCGTCCCTGATTCCCACCTGCCGGTGATTC
GATGGGGCCCACTAAAAGAGTAAACCTCCATAGTCACCGACCGGGCAAAG
ATGGAGTTCTACCCCCTTGCCGTATGCATCGTATTCAACAAGTCTAGTCG
ATCCTGGATTCTTGACATGCTGTCACTAGATGCGGCCTATCTCAACGCCA
TGGTCATCACTACCCAATCATACTTTGGGATCTACAAGGGTCCCGATGCG
GCCCAATCCCCTCATCTGGGGAAAGCAATCCGCCTGTTACGCAACCGGCT
CGAAGACGAGCAGGTTCGCGTGTCCAATGCAACCGTAATGGTCGTCATTA
TCCTCATCCTGCACGCGCATATCGTCAGTGATTATGCTGCCGTACAACAT
CACACCCAGGGTCTCCGCAAGATGGTCCGTCTGCGCGGGGGCTTGGGGGC
GTTCACATCCAATAACAAACTGGTCATTGATCTTATCCGGTGGGTCCTTT
CCCCTGTCCGTTACTTTCCTCCTACTTTCCTTGCCGGTTATTATATTCCC
CTTTCGTATTAGACTACATACTTGCTTGCAACCTAACCCTGTGATCAGAT
GCGATGTGGGACTAGCGATCCACAGTGGAGACAAACCCGCGTTTTTCGAG
AACCGTGATCTCGACATCTTCGTCCCTTCCGAACTCTGCTTCACGGCGCG
CTCTCGTCCCGACCCGTCGTTCGTCCGGGAGCTTGACCCCGGTCTTGCTC
GGATCTGGCACATTATGCAGGGATTCTGTGCCCAGGTCAACCTGACCACC
AAGACGAACGGCATGATCCCCGAGACCGATTTCATGAAAACAATGGCCTC
CGTCATGTACCCTCTGTTACACATGAGCTTTGATCCCGGGTCCCGTGACG
AGGCGATTCGTCTAGCTTTACTCAGCTACGGATTCGACATCTTCCTGCAG
TTCCGCAGCGACCCCACTCCGTACGTCCACCTGGCTGCCTCGTACCAGCG
CTGTCTCAATGGTTTAGCCAAGCGAGATGATGTGTCCCCGCAACTGTGGA
TCTGGCTGTTAACCGTCGGTGGTCTTGTGGTGTTTTTACCTGCCGTCAGG
CGGAATTTCCGGCACTGGCTGCTGTATTACCTGGGGAGCTGTCGAGTTCG
CTCGTGGGAGGAGATGCGGGCCATTCTCTCTTCTTTCATTTGGATCGGAC
TTGTGCATGATAAAGGAGGAAAAGAGATCTTTGATACGTTGTTTGCCAAC
CTGGAGCCGGGGGCGGAGACATTTGTTGATCAGACGTCTTCGTCGAAATT
AATCACCTGTTAGAGGTGTTACGATTTATGTGAACTGGTATTGTTTAAGG
TTCGAAAATGGATATAGGGCACAAATACTATATATTGATACATACACTAC
TGTTCTAGTCTGCG back to topCoding sequence (CDS) from alignment at ch2:127575..129588- >KJC3_001588-T1 ID=KJC3_001588-T1|Name=KJC3_001588-T1|organism=Aspergillus niger KJC3|type=CDS|length=5940bp|location=Sequence derived from alignment at ch2:127575..129588- (Aspergillus niger KJC3)
ATGCGATGTGGGACTAGCGATCCACAGTGGAGACAAACCCGCGTTTTTCG
AGAACCGTGATCTCGACATCTTCGTCCCTTCCGAACTCTGCTTCACGGCG
CGCTCTCGTCCCGACCCGTCGTTCGTCCGGGAGCTTGACCCCGGTCTTGC
TCGGATCTGGCACATTATGCAGGGATTCTGTGCCCAGGTCAACCTGACCA
CCAAGACGAACGGCATGATCCCCGAGACCGATTTCATGAAAACAATGGCC
TCCGTCATGTACCCTCTGTTACACATGAGCTTTGATCCCGGGTCCCGTGA
CGAGGCGATTCGTCTAGCTTTACTCAGCTACGGATTCGACATCTTCCTGC
AGTTCCGCAGCGACCCCACTCCGTACGTCCACCTGGCTGCCTCGTACCAG
CGCTGTCTCAATGGTTTAGCCAAGCGAGATGATGTGTCCCCGCAACTGTG
GATCTGGCTGTTAACCGTCGGTGGTCTTGTGGTGTTTTTACCTGCCGTCA
GGCGGAATTTCCGGCACTGGCTGCTGTATTACCTGGGGAGCTGTCGAGTT
CGCTCGTGGGAGGAGATGCGGGCCATTCTCTCTTCTTTCATTTGGATCGG
ACTTGTGCATGATAAAGGAGGAAAAGAGATCTTTGATACGTTGTTTGCCA
ACCTGGAGCCGGGGGCGGAGACATTTGTTGATCAGACGTCTTCGTCGAAA
TTAATCACCTGTTAGTCACCGACCGGGCAAAGATGGAGTTCTACCCCCTT
GCCGTATGCATCGTATTCAACAAGTCTAGTCGATCCTGGATTCTTGACAT
GCTGTCACTAGATGCGGCCTATCTCAACGCCATGGTCATCACTACCCAAT
CATACTTTGGGATCTACAAGGGTCCCGATGCGGCCCAATCCCCTCATCTG
GGGAAAGCAATCCGCCTGTTACGCAACCGGCTCGAAGACGAGCAGGTTCG
CGTGTCCAATGCAACCGTAATGGTCGTCATTATCCTCATCCTGCACGCGC
ATATCGTCAGTGATTATGCTGCCGTACAACATCACACCCAGGGTCTCCGC
AAGATGGTCCGTCTGCGCGGGGGCTTGGGGGCGTTCACATCCAATAACAA
ACTGGTCATTGATCTTATCCGTCGCCATGGCGGACATGCCCTTCATCGTC
TCCACCGGCACCAAGAAGGTCGATCCCCGTACCCGCAAACTCATTCGCAG
CCATGTCATGATTGGCAAAAACCGTGGCAAATCCCGCTATCGCCAAGCAG
AAGCCGATCCATCGACACCGGCGGACACGAGCACAGACGATACTTCGGCT
CCTCCTGCCGATGGGGCGGGTTCATCATCCACATCGCCTGCGGCACAAGT
GCCAGCCACCCGCTTGCCGTTAAATCTTCCCCGCAGAGTCGGCAACGACA
TGTCCCTCATCCGGCTGGCTGATGACACCACTAGCCCAGCAGCCCTAGCC
ACTATTCTTCGCTATGTCGCCCTCCAAGCAGTCTGATGCGATGTGGGACT
AGCGATCCACAGTGGAGACAAACCCGCGTTTTTCGAGAACCGTGATCTCG
ACATCTTCGTCCCTTCCGAACTCTGCTTCACGGCGCGCTCTCGTCCCGAC
CCGTCGTTCGTCCGGGAGCTTGACCCCGGTCTTGCTCGGATCTGGCACAT
TATGCAGGGATTCTGTGCCCAGGTCAACCTGACCACCAAGACGAACGGCA
TGATCCCCGAGACCGATTTCATGAAAACAATGGCCTCCGTCATGTACCCT
CTGTTACACATGAGCTTTGATCCCGGGTCCCGTGACGAGGCGATTCGTCT
AGCTTTACTCAGCTACGGATTCGACATCTTCCTGCAGTTCCGCAGCGACC
CCACTCCGTACGTCCACCTGGCTGCCTCGTACCAGCGCTGTCTCAATGGT
TTAGCCAAGCGAGATGATGTGTCCCCGCAACTGTGGATCTGGCTGTTAAC
CGTCGGTGGTCTTGTGGTGTTTTTACCTGCCGTCAGGCGGAATTTCCGGC
ACTGGCTGCTGTATTACCTGGGGAGCTGTCGAGTTCGCTCGTGGGAGGAG
ATGCGGGCCATTCTCTCTTCTTTCATTTGGATCGGACTTGTGCATGATAA
AGGAGGAAAAGAGATCTTTGATACGTTGTTTGCCAACCTGGAGCCGGGGG
CGGAGACATTTGTTGATCAGACGTCTTCGTCGAAATTAATCACCTGTTAG
TCACCGACCGGGCAAAGATGGAGTTCTACCCCCTTGCCGTATGCATCGTA
TTCAACAAGTCTAGTCGATCCTGGATTCTTGACATGCTGTCACTAGATGC
GGCCTATCTCAACGCCATGGTCATCACTACCCAATCATACTTTGGGATCT
ACAAGGGTCCCGATGCGGCCCAATCCCCTCATCTGGGGAAAGCAATCCGC
CTGTTACGCAACCGGCTCGAAGACGAGCAGGTTCGCGTGTCCAATGCAAC
CGTAATGGTCGTCATTATCCTCATCCTGCACGCGCATATCGTCAGTGATT
ATGCTGCCGTACAACATCACACCCAGGGTCTCCGCAAGATGGTCCGTCTG
CGCGGGGGCTTGGGGGCGTTCACATCCAATAACAAACTGGTCATTGATCT
TATCCGTCGCCATGGCGGACATGCCCTTCATCGTCTCCACCGGCACCAAG
AAGGTCGATCCCCGTACCCGCAAACTCATTCGCAGCCATGTCATGATTGG
CAAAAACCGTGGCAAATCCCGCTATCGCCAAGCAGAAGCCGATCCATCGA
CACCGGCGGACACGAGCACAGACGATACTTCGGCTCCTCCTGCCGATGGG
GCGGGTTCATCATCCACATCGCCTGCGGCACAAGTGCCAGCCACCCGCTT
GCCGTTAAATCTTCCCCGCAGAGTCGGCAACGACATGTCCCTCATCCGGC
TGGCTGATGACACCACTAGCCCAGCAGCCCTAGCCACTATTCTTCGCTAT
GTCGCCCTCCAAGCAGTCTGATGCGATGTGGGACTAGCGATCCACAGTGG
AGACAAACCCGCGTTTTTCGAGAACCGTGATCTCGACATCTTCGTCCCTT
CCGAACTCTGCTTCACGGCGCGCTCTCGTCCCGACCCGTCGTTCGTCCGG
GAGCTTGACCCCGGTCTTGCTCGGATCTGGCACATTATGCAGGGATTCTG
TGCCCAGGTCAACCTGACCACCAAGACGAACGGCATGATCCCCGAGACCG
ATTTCATGAAAACAATGGCCTCCGTCATGTACCCTCTGTTACACATGAGC
TTTGATCCCGGGTCCCGTGACGAGGCGATTCGTCTAGCTTTACTCAGCTA
CGGATTCGACATCTTCCTGCAGTTCCGCAGCGACCCCACTCCGTACGTCC
ACCTGGCTGCCTCGTACCAGCGCTGTCTCAATGGTTTAGCCAAGCGAGAT
GATGTGTCCCCGCAACTGTGGATCTGGCTGTTAACCGTCGGTGGTCTTGT
GGTGTTTTTACCTGCCGTCAGGCGGAATTTCCGGCACTGGCTGCTGTATT
ACCTGGGGAGCTGTCGAGTTCGCTCGTGGGAGGAGATGCGGGCCATTCTC
TCTTCTTTCATTTGGATCGGACTTGTGCATGATAAAGGAGGAAAAGAGAT
CTTTGATACGTTGTTTGCCAACCTGGAGCCGGGGGCGGAGACATTTGTTG
ATCAGACGTCTTCGTCGAAATTAATCACCTGTTAGTCACCGACCGGGCAA
AGATGGAGTTCTACCCCCTTGCCGTATGCATCGTATTCAACAAGTCTAGT
CGATCCTGGATTCTTGACATGCTGTCACTAGATGCGGCCTATCTCAACGC
CATGGTCATCACTACCCAATCATACTTTGGGATCTACAAGGGTCCCGATG
CGGCCCAATCCCCTCATCTGGGGAAAGCAATCCGCCTGTTACGCAACCGG
CTCGAAGACGAGCAGGTTCGCGTGTCCAATGCAACCGTAATGGTCGTCAT
TATCCTCATCCTGCACGCGCATATCGTCAGTGATTATGCTGCCGTACAAC
ATCACACCCAGGGTCTCCGCAAGATGGTCCGTCTGCGCGGGGGCTTGGGG
GCGTTCACATCCAATAACAAACTGGTCATTGATCTTATCCGTCGCCATGG
CGGACATGCCCTTCATCGTCTCCACCGGCACCAAGAAGGTCGATCCCCGT
ACCCGCAAACTCATTCGCAGCCATGTCATGATTGGCAAAAACCGTGGCAA
ATCCCGCTATCGCCAAGCAGAAGCCGATCCATCGACACCGGCGGACACGA
GCACAGACGATACTTCGGCTCCTCCTGCCGATGGGGCGGGTTCATCATCC
ACATCGCCTGCGGCACAAGTGCCAGCCACCCGCTTGCCGTTAAATCTTCC
CCGCAGAGTCGGCAACGACATGTCCCTCATCCGGCTGGCTGATGACACCA
CTAGCCCAGCAGCCCTAGCCACTATTCTTCGCTATGTCGCCCTCCAAGCA
GTCTGATGCGATGTGGGACTAGCGATCCACAGTGGAGACAAACCCGCGTT
TTTCGAGAACCGTGATCTCGACATCTTCGTCCCTTCCGAACTCTGCTTCA
CGGCGCGCTCTCGTCCCGACCCGTCGTTCGTCCGGGAGCTTGACCCCGGT
CTTGCTCGGATCTGGCACATTATGCAGGGATTCTGTGCCCAGGTCAACCT
GACCACCAAGACGAACGGCATGATCCCCGAGACCGATTTCATGAAAACAA
TGGCCTCCGTCATGTACCCTCTGTTACACATGAGCTTTGATCCCGGGTCC
CGTGACGAGGCGATTCGTCTAGCTTTACTCAGCTACGGATTCGACATCTT
CCTGCAGTTCCGCAGCGACCCCACTCCGTACGTCCACCTGGCTGCCTCGT
ACCAGCGCTGTCTCAATGGTTTAGCCAAGCGAGATGATGTGTCCCCGCAA
CTGTGGATCTGGCTGTTAACCGTCGGTGGTCTTGTGGTGTTTTTACCTGC
CGTCAGGCGGAATTTCCGGCACTGGCTGCTGTATTACCTGGGGAGCTGTC
GAGTTCGCTCGTGGGAGGAGATGCGGGCCATTCTCTCTTCTTTCATTTGG
ATCGGACTTGTGCATGATAAAGGAGGAAAAGAGATCTTTGATACGTTGTT
TGCCAACCTGGAGCCGGGGGCGGAGACATTTGTTGATCAGACGTCTTCGT
CGAAATTAATCACCTGTTAGTCACCGACCGGGCAAAGATGGAGTTCTACC
CCCTTGCCGTATGCATCGTATTCAACAAGTCTAGTCGATCCTGGATTCTT
GACATGCTGTCACTAGATGCGGCCTATCTCAACGCCATGGTCATCACTAC
CCAATCATACTTTGGGATCTACAAGGGTCCCGATGCGGCCCAATCCCCTC
ATCTGGGGAAAGCAATCCGCCTGTTACGCAACCGGCTCGAAGACGAGCAG
GTTCGCGTGTCCAATGCAACCGTAATGGTCGTCATTATCCTCATCCTGCA
CGCGCATATCGTCAGTGATTATGCTGCCGTACAACATCACACCCAGGGTC
TCCGCAAGATGGTCCGTCTGCGCGGGGGCTTGGGGGCGTTCACATCCAAT
AACAAACTGGTCATTGATCTTATCCGTCGCCATGGCGGACATGCCCTTCA
TCGTCTCCACCGGCACCAAGAAGGTCGATCCCCGTACCCGCAAACTCATT
CGCAGCCATGTCATGATTGGCAAAAACCGTGGCAAATCCCGCTATCGCCA
AGCAGAAGCCGATCCATCGACACCGGCGGACACGAGCACAGACGATACTT
CGGCTCCTCCTGCCGATGGGGCGGGTTCATCATCCACATCGCCTGCGGCA
CAAGTGCCAGCCACCCGCTTGCCGTTAAATCTTCCCCGCAGAGTCGGCAA
CGACATGTCCCTCATCCGGCTGGCTGATGACACCACTAGCCCAGCAGCCC
TAGCCACTATTCTTCGCTATGTCGCCCTCCAAGCAGTCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001588-T1.utr3p1 | KJC3_001588-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001588-T1.utr5p1 | KJC3_001588-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch2 | supercontig | ch2:127575..129588 - |
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