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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:134230..135681+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001591-T1 ID=KJC3_001591-T1|Name=KJC3_001591-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1452bp|location=Sequence derived from alignment at ch2:134230..135681+ (Aspergillus niger KJC3) TATGGACATTATCTGGCGAGATTCGGCTGAACCAGCCGTGTACGAAGAGG
CTCGCGTCGGTCGTGTATTCAATCACCGTCGTCCCCAACGCTTTCCTTTG
GCGGTTGTCAAGGCTATCAGCACGAGCGACATTATTGCAGCTGTGAAGCT
AGCCGCCGAAAAGAAGTGTCGCGTTGCTATACGCTCGGGAGGGCATTCAT
GGGCAGCATGGAGTGTCCGCGATGAATCCATCCTCATCGACCTGGGGAAC
TACAAGCACTTGGAAGTGGATGCGGAAAATCGCATCGCAAAAGCCACTCC
TAGTATGACAGGGAAAGAGCTCAATGGAACCCTGATCAAGGAATATGGCT
TGATGTTTCCAGGAGGTCACTGTCCCGATGTCGGCCTGGGTGGGTTCTTG
CTACAAGGCGGAATGGGATGGAACTGTCGGGTCAGTTACTATGCTCCCAC
CATACATTTCGCCTGGCTAATGAGTAACTCCGACAGAACTGGGGTTGGGC
GTGTGAACGAGTTCAAGCAGTGGATGTAGTGACAGCCACAGGCGAGCTGC
TGCACTGCAACGCTACCCAGAACCGCGAGCTCTACTGGGCTGCTAGAGGG
GCTGGTCCAGGGTTTCCTGGTGTGGTGACGCAGTATCATTTGGAGCTGAT
CCCATACCCCAAGGACGGATTCCGCTCGTCTGGCTACGTCTACCCTATCC
GACAGTATCGACAAGTCTTTGACTGGCTCCTGTCTATCACCCCTGGCTTC
GACGAGGACACTGAAATTGCCGCCGTGGCCGCGTACCCCGAGGGCATTGA
TGAGCACTGCTTCTTCGTGTTATTTGTCGCCATGAAGTCAACCCCTGAAG
AAGCCGAAAAGGCTTTACTGCCAGCGCAGATTACAAGGCCAGCCGGCGCG
ATCCAGGAGTGGTTCTGCCAGGTGGATAGCCTGGAAAATCAGTACTCTCA
GCAAGCCAAAGCTAATCCAGAGAGACACCGGTACTGCGCCGAGAATGCCT
ACATCCGGAATGACGCCGACGTCCCCGCCGTGCTGGAGGAGGCATTTACG
ACACTGCCCCACAAGAAGGCCTTTGCCCTCTGGTACGCCATGTACCCCTG
TAGCCGTCGGAAGCTGCCCGACATGGCCTTGAGCATGCAGTCGGACCATT
ACTTTGCACTCTACACTGTGTGGGAGGAGGAGAAGGACGATGACAGATGT
CAAGCGTGGGTGGCTGATGTGATGAAGAGAGTCCAGCGACATGGGGTCGG
GTCTTATCTGGGAGATGCGGACTTTCAGGTGCGAAAAACGAGGTACTGGG
CGGATGACAATGCTCGACGCTTGATGGACATCCGTCGCAAATGGGATCCT
CAGGGGCGTATCTGTGGATATCTGGACCAGGGTGATCAATCTGGAACGAG
AGGGCTGGATAGTGCCAAGGAGATCAAGTTGTGAGTGGTTGTTTGTTAGC
CG back to topCoding sequence (CDS) from alignment at ch2:134230..135681+ >KJC3_001591-T1 ID=KJC3_001591-T1|Name=KJC3_001591-T1|organism=Aspergillus niger KJC3|type=CDS|length=2754bp|location=Sequence derived from alignment at ch2:134230..135681+ (Aspergillus niger KJC3) ATGGACATTATCTGGCGAGATTCGGCTGAACCAGCCGTGTACGAAGAGGC TCGCGTCGGTCGTGTATTCAATCACCGTCGTCCCCAACGCTTTCCTTTGG CGGTTGTCAAGGCTATCAGCACGAGCGACATTATTGCAGCTGTGAAGCTA GCCGCCGAAAAGAAGTGTCGCGTTGCTATACGCTCGGGAGGGCATTCATG GGCAGCATGGAGTGTCCGCGATGAATCCATCCTCATCGACCTGGGGAACT ACAAGCACTTGGAAGTGGATGCGGAAAATCGCATCGCAAAAGCCACTCCT AGTATGACAGGGAAAGAGCTCAATGGAACCCTGATCAAGGAATATGGCTT GATGTTTCCAGGAGGTCACTGTCCCGATGTCGGCCTGGGTGGGTTCTTGC TACAAGGCGGAATGGGATGGAACTGTCGGAACTGGGGTTGGGCGTGTGAA CGAGTTCAAGCAGTGGATGTAGTGACAGCCACAGGCGAGCTGCTGCACTG CAACGCTACCCAGAACCGCGAGCTCTACTGGGCTGCTAGAGGGGCTGGTC CAGGGTTTCCTGGTGTGGTGACGCAGTATCATTTGGAGCTGATCCCATAC CCCAAGGACGGATTCCGCTCGTCTGGCTACGTCTACCCTATCCGACAGTA TCGACAAGTCTTTGACTGGCTCCTGTCTATCACCCCTGGCTTCGACGAGG ACACTGAAATTGCCGCCGTGGCCGCGTACCCCGAGGGCATTGATGAGCAC TGCTTCTTCGTGTTATTTGTCGCCATGAAGTCAACCCCTGAAGAAGCCGA AAAGGCTTTACTGCCAGCGCAGATTACAAGGCCAGCCGGCGCGATCCAGG AGTGGTTCTGCCAGGTGGATAGCCTGGAAAATCAGTACTCTCAGCAAGCC AAAGCTAATCCAGAGAGACACCGGTACTGCGCCGAGAATGCCTACATCCG GAATGACGCCGACGTCCCCGCCGTGCTGGAGGAGGCATTTACGACACTGC CCCACAAGAAGGCCTTTGCCCTCTGGTACGCCATGTACCCCTGTAGCCGT CGGAAGCTGCCCGACATGGCCTTGAGCATGCAGTCGGACCATTACTTTGC ACTCTACACTGTGTGGGAGGAGGAGAAGGACGATGACAGATGTCAAGCGT GGGTGGCTGATGTGATGAAGAGAGTCCAGCGACATGGGGTCGGGTCTTAT CTGGGAGATGCGGACTTTCAGGTGCGAAAAACGAGGTACTGGGCGGATGA CAATGCTCGACGCTTGATGGACATCCGTCGCAAATGGGATCCTCAGGGGC GTATCTGTGGATATCTGGACCAGGGTGATCAATCTGGAACGAGAGGGCTG GATAGTGCCAAGGAGATCAAGTTGTGAATGGACATTATCTGGCGAGATTC GGCTGAACCAGCCGTGTACGAAGAGGCTCGCGTCGGTCGTGTATTCAATC ACCGTCGTCCCCAACGCTTTCCTTTGGCGGTTGTCAAGGCTATCAGCACG AGCGACATTATTGCAGCTGTGAAGCTAGCCGCCGAAAAGAAGTGTCGCGT TGCTATACGCTCGGGAGGGCATTCATGGGCAGCATGGAGTGTCCGCGATG AATCCATCCTCATCGACCTGGGGAACTACAAGCACTTGGAAGTGGATGCG GAAAATCGCATCGCAAAAGCCACTCCTAGTATGACAGGGAAAGAGCTCAA TGGAACCCTGATCAAGGAATATGGCTTGATGTTTCCAGGAGGTCACTGTC CCGATGTCGGCCTGGGTGGGTTCTTGCTACAAGGCGGAATGGGATGGAAC TGTCGGAACTGGGGTTGGGCGTGTGAACGAGTTCAAGCAGTGGATGTAGT GACAGCCACAGGCGAGCTGCTGCACTGCAACGCTACCCAGAACCGCGAGC TCTACTGGGCTGCTAGAGGGGCTGGTCCAGGGTTTCCTGGTGTGGTGACG CAGTATCATTTGGAGCTGATCCCATACCCCAAGGACGGATTCCGCTCGTC TGGCTACGTCTACCCTATCCGACAGTATCGACAAGTCTTTGACTGGCTCC TGTCTATCACCCCTGGCTTCGACGAGGACACTGAAATTGCCGCCGTGGCC GCGTACCCCGAGGGCATTGATGAGCACTGCTTCTTCGTGTTATTTGTCGC CATGAAGTCAACCCCTGAAGAAGCCGAAAAGGCTTTACTGCCAGCGCAGA TTACAAGGCCAGCCGGCGCGATCCAGGAGTGGTTCTGCCAGGTGGATAGC CTGGAAAATCAGTACTCTCAGCAAGCCAAAGCTAATCCAGAGAGACACCG GTACTGCGCCGAGAATGCCTACATCCGGAATGACGCCGACGTCCCCGCCG TGCTGGAGGAGGCATTTACGACACTGCCCCACAAGAAGGCCTTTGCCCTC TGGTACGCCATGTACCCCTGTAGCCGTCGGAAGCTGCCCGACATGGCCTT GAGCATGCAGTCGGACCATTACTTTGCACTCTACACTGTGTGGGAGGAGG AGAAGGACGATGACAGATGTCAAGCGTGGGTGGCTGATGTGATGAAGAGA GTCCAGCGACATGGGGTCGGGTCTTATCTGGGAGATGCGGACTTTCAGGT GCGAAAAACGAGGTACTGGGCGGATGACAATGCTCGACGCTTGATGGACA TCCGTCGCAAATGGGATCCTCAGGGGCGTATCTGTGGATATCTGGACCAG GGTGATCAATCTGGAACGAGAGGGCTGGATAGTGCCAAGGAGATCAAGTT GTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0071949 | FAD binding |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001591-T1.utr5p1 | KJC3_001591-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001591-T1.utr3p1 | KJC3_001591-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | CAZy:AA7 |
DBxref | InterPro:IPR036318 |
DBxref | InterPro:IPR016166 |
DBxref | InterPro:IPR006093 |
DBxref | InterPro:IPR016169 |
DBxref | InterPro:IPR006094 |
DBxref | InterPro:IPR016167 |
DBxref | PFAM:PF01565 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch2 | supercontig | ch2:134230..135681 + |
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