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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:159017..160412+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001599-T1 ID=KJC3_001599-T1|Name=KJC3_001599-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1396bp|location=Sequence derived from alignment at ch2:159017..160412+ (Aspergillus niger KJC3)
GATCATTCCTCATCTGACGCCCAGACAACATGCTCGGCCTGCAAGTGAAT
GAATATCTTCTTTGACCCTTATATTCATGGTGTGTCGTTATCACCGCCAT
CATCGTTCTGTTCATATCATTCTTATACTACAATTAATTCGGGCTTTTTT
TCATCCCAGGGCAGCATGTTAGACCTGGTAGGAAACAAGAAGGTACTCAT
CAATGCTCACCAACTATACTATACTAGCGAAAGGCTGGTACGCTGTTGCC
CTCCTCCCTTGGTCTGTTATTATCTAACAAGTGTGACGACAATGTAAACA
GAATCCCCGTCACAACCCAACGTCTCCATCCTCCCTGACTTCCATACAAA
CCGACCAGCTGTTGCAACCAAAATCCTCCAATTTTTCTTTGCCTGCCTCA
CTGCCGGTCATAGGTCATGGTGATCACCACAGCCATGAGCCTGAGATCTG
TACTCTGAAGCCAAGCGATCTGACCCTCTTAAGTCGTTGGTGTGCCAGTA
CATATCGATCTCTCACGCCCGATGGCAAAAACGGCCAAATCTGGAGAAGC
ACAATCGTCCGAGAGGCAATGAGCAACCCGCCACTGCTGGATAGCATTCT
AGCTGTGGCAGCATTAGATATCGCTTACAATTGCGGAGGGGACAGCGCAC
AGAGAGATCAACACGATCACCAACAAATCCAGTGTCTAGCTGTTCTACAT
TGGGATCAAGCTCGCGCCGGGCTTGAAAAGCAGATCAACCGCGACAGATC
GGAGCGGTGTCGCAAAGAAAGCAATTTCATGATGGCTATGTGCAATATTC
TTATCATCCTCGCCTTCGGACATATACGAATGCCCCCATTCTCAAGCGGT
TCCGCGTTGGTAGATCTTTGTCACATTTTTCGCCAGTTACGCGGGTCACC
GGAGGTTCTTCTCCGCCTGATCGATGAAGTCAAACCAAGCGAGGAGTTGG
CTTTCCTAGTCCGCCAGGAGACCGGTCCTACCATGCCAAATACTTCCACC
CTGGCCATTCATGCTCTGCGAAAACTACATAATGACGATAGCAAAGGGAG
GAATTACCCCCAAACCAGGGAAATTTACAACAAAGCCATCGATCGCTTGG
CCTCATGTCTGCGTTATATTGCCTGGGGCAGCCATCCCGGACTGGTCGGA
ATCTCCTGGCTGCTGGAGGTTCCAGCAGTATTTGTGGATTTAGTTCTGGA
CCACCAGCCAATGGCATTGACAATTATGGCGCACTATTGCGTGGTTCTAT
ACCACTTACGGTCACATTGGTGGATGGGAGCATTCGGCATCAAAGTTTTA
GAGGAGATTCGTCAACTGTTGGGCAGCGATCGCTTGGAGAATATACAGTG
GGCGATCGATGGGATATCAACAGATGGCACTGCACATTTTGACTGA back to topCoding sequence (CDS) from alignment at ch2:159017..160412+ >KJC3_001599-T1 ID=KJC3_001599-T1|Name=KJC3_001599-T1|organism=Aspergillus niger KJC3|type=CDS|length=2568bp|location=Sequence derived from alignment at ch2:159017..160412+ (Aspergillus niger KJC3)
ATGAATATCTTCTTTGACCCTTATATTCATGGTGTGTCGTTATCACCGCC
ATCATCGTTCTGTTCATATCATTCTTATACTACAATTAATTCGGGCTTTT
TTTCATCCCAGGGCAGCATGTTAGACCTGGTAGGAAACAAGAAGGTACTC
ATCAATGCTCACCAACTATACTATACTAGCGAAAGGCTGAATCCCCGTCA
CAACCCAACGTCTCCATCCTCCCTGACTTCCATACAAACCGACCAGCTGT
TGCAACCAAAATCCTCCAATTTTTCTTTGCCTGCCTCACTGCCGGTCATA
GGTCATGGTGATCACCACAGCCATGAGCCTGAGATCTGTACTCTGAAGCC
AAGCGATCTGACCCTCTTAAGTCGTTGGTGTGCCAGTACATATCGATCTC
TCACGCCCGATGGCAAAAACGGCCAAATCTGGAGAAGCACAATCGTCCGA
GAGGCAATGAGCAACCCGCCACTGCTGGATAGCATTCTAGCTGTGGCAGC
ATTAGATATCGCTTACAATTGCGGAGGGGACAGCGCACAGAGAGATCAAC
ACGATCACCAACAAATCCAGTGTCTAGCTGTTCTACATTGGGATCAAGCT
CGCGCCGGGCTTGAAAAGCAGATCAACCGCGACAGATCGGAGCGGTGTCG
CAAAGAAAGCAATTTCATGATGGCTATGTGCAATATTCTTATCATCCTCG
CCTTCGGACATATACGAATGCCCCCATTCTCAAGCGGTTCCGCGTTGGTA
GATCTTTGTCACATTTTTCGCCAGTTACGCGGGTCACCGGAGGTTCTTCT
CCGCCTGATCGATGAAGTCAAACCAAGCGAGGAGTTGGCTTTCCTAGTCC
GCCAGGAGACCGGTCCTACCATGCCAAATACTTCCACCCTGGCCATTCAT
GCTCTGCGAAAACTACATAATGACGATAGCAAAGGGAGGAATTACCCCCA
AACCAGGGAAATTTACAACAAAGCCATCGATCGCTTGGCCTCATGTCTGC
GTTATATTGCCTGGGGCAGCCATCCCGGACTGGTCGGAATCTCCTGGCTG
CTGGAGGTTCCAGCAGTATTTGTGGATTTAGTTCTGGACCACCAGCCAAT
GGCATTGACAATTATGGCGCACTATTGCGTGGTTCTATACCACTTACGGT
CACATTGGTGGATGGGAGCATTCGGCATCAAAGTTTTAGAGGAGATTCGT
CAACTGTTGGGCAGCGATCGCTTGGAGAATATACAGTGGGCGATCGATGG
GATATCAACAGATGGCACTGCACATTTTGACTGAATGAATATCTTCTTTG
ACCCTTATATTCATGGTGTGTCGTTATCACCGCCATCATCGTTCTGTTCA
TATCATTCTTATACTACAATTAATTCGGGCTTTTTTTCATCCCAGGGCAG
CATGTTAGACCTGGTAGGAAACAAGAAGGTACTCATCAATGCTCACCAAC
TATACTATACTAGCGAAAGGCTGAATCCCCGTCACAACCCAACGTCTCCA
TCCTCCCTGACTTCCATACAAACCGACCAGCTGTTGCAACCAAAATCCTC
CAATTTTTCTTTGCCTGCCTCACTGCCGGTCATAGGTCATGGTGATCACC
ACAGCCATGAGCCTGAGATCTGTACTCTGAAGCCAAGCGATCTGACCCTC
TTAAGTCGTTGGTGTGCCAGTACATATCGATCTCTCACGCCCGATGGCAA
AAACGGCCAAATCTGGAGAAGCACAATCGTCCGAGAGGCAATGAGCAACC
CGCCACTGCTGGATAGCATTCTAGCTGTGGCAGCATTAGATATCGCTTAC
AATTGCGGAGGGGACAGCGCACAGAGAGATCAACACGATCACCAACAAAT
CCAGTGTCTAGCTGTTCTACATTGGGATCAAGCTCGCGCCGGGCTTGAAA
AGCAGATCAACCGCGACAGATCGGAGCGGTGTCGCAAAGAAAGCAATTTC
ATGATGGCTATGTGCAATATTCTTATCATCCTCGCCTTCGGACATATACG
AATGCCCCCATTCTCAAGCGGTTCCGCGTTGGTAGATCTTTGTCACATTT
TTCGCCAGTTACGCGGGTCACCGGAGGTTCTTCTCCGCCTGATCGATGAA
GTCAAACCAAGCGAGGAGTTGGCTTTCCTAGTCCGCCAGGAGACCGGTCC
TACCATGCCAAATACTTCCACCCTGGCCATTCATGCTCTGCGAAAACTAC
ATAATGACGATAGCAAAGGGAGGAATTACCCCCAAACCAGGGAAATTTAC
AACAAAGCCATCGATCGCTTGGCCTCATGTCTGCGTTATATTGCCTGGGG
CAGCCATCCCGGACTGGTCGGAATCTCCTGGCTGCTGGAGGTTCCAGCAG
TATTTGTGGATTTAGTTCTGGACCACCAGCCAATGGCATTGACAATTATG
GCGCACTATTGCGTGGTTCTATACCACTTACGGTCACATTGGTGGATGGG
AGCATTCGGCATCAAAGTTTTAGAGGAGATTCGTCAACTGTTGGGCAGCG
ATCGCTTGGAGAATATACAGTGGGCGATCGATGGGATATCAACAGATGGC
ACTGCACATTTTGACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001599-T1.utr5p1 | KJC3_001599-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:159017..160412 + |
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