|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:161064..163920+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001600-T1 ID=KJC3_001600-T1|Name=KJC3_001600-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2857bp|location=Sequence derived from alignment at ch2:161064..163920+ (Aspergillus niger KJC3)
ACCACTTGGTAAATTCTTTCTTTTCTCGTACTATCTCATTCCCCGATACC
CCTACCTCCTTTCCTCTTTCTTTTTCCATTTTTTTCCCCCTCGGCTTACC
AACAACCACCCCCCTCCCCCACTGTCCTCTTTTTCATTGGTTCTTTGCTA
TATTATAGCTGTTCCCGTTAAGCTGGCTTTATTACGGAGTATTTGTGTAT
ATATTCAGTTTTCAGGCCCCGCTCTGCCCCCTTTCCTCGAATCAAGAACC
TGATCGGTAGAGGGATTACTCGAACCCACTTTCGCTGAAATAATAGTTGG
CATAGTTCTGCACAGGAACTGGATAGGATGAATTCGTTTAATCATATGAG
GGTGTTGCCTCCCGGGTTGGCCCGGACTGATGCCGTGGGAAACTCACCAG
ACTCCCAAGGGCATGGGCCCGATAATTCTCCGAGCAGCAGCACCTACAAC
ACAATACCTATCCCTCCTTTTCCCGAGGAAGCTACAGAGCTGATTAGAGT
ATCTAAGGAACAGTCAACTTTGTCGTTGTCCCCTGCCAAACCTGACGCTG
CGAGAACAACCGGACCCCAAAAGTCGACCAGCGCTGTGGCCGGTCGCCCG
ACTCTCTTCTGGGTCCATGCGAGTCCAAAATCTATTTCAGATGGCACCAG
GCCCGAGGACCTGAAACGTATCCGATCCCATGTGATGTCCGAGCATAATC
GGAAGAAAAGGCTATCTAGCACTGAATTACATAAACGTCGATCATGGAAA
CGTGTAGCCTCCCAACCCCCAGAGACCGATCGCGAATATGCGGAGGGCCC
GGTCTGGCCCAAAGCTGAACTTGCAGCTCAAGCATCTGTGCCGCAGCGCT
CGACTGACAGTCAGGGCCAGGAAGATGAATTAATTTGTTCAGTATCGTCC
CCCATACCCCGGAGCCTGGGAATACAATCGGCCATAGATCCGTTCAACAC
CTCTCATACTCCTCTTACCGATCGCATGATGCGACATCTGCAGCATTGTA
AGTTACATCTCGACATTTTGGTTAGATACCTGCAACTTAATCGACGGATA
CTGATAGTCCGGTCTAGTTTTAGTTGATCTTTCCCAAGACGGTGTGCCTT
TCCAGAACCGACGGCTTGACACGATCAAAAGGCATTGGGGGGAATTGATT
CAGAACAATAAGGCCTGCCTTCATGCATGTATCTGTGTTGCTTCCTCGGA
TATTGCTCTACGGACCAGTGAGCTGCCTCTCAAGAGTTCCAGCAATAAAC
CATTTAGCCCCCTGCTGCTCGACACATTTCACCATCGGGGAGAAACAATC
CGGCTGGTCAATAGCGGTCTCTCAGACCCTCTCAGAGCAGCTAGTGATGG
CTTGATTGCGTCTGTATCCATGTTGCTGACGATCGAGGTACGGGTGCCTT
TCCCACCCCCTTCTTTGGGTTACGCTTTTACCCCCTCGGGTGACAAATAA
GTCTCACTCTCGGCAGATTGCGACAGGTACACCCGCCTATCTGAAGATGC
ACCTAGCCGGACTACGTCAAATGGTAGCACTGCGCAGGAGTTTCATAGAC
GTTCCGTATCCCGTACGATATCAGATTTCATGGTAAGTCTGCTCCTCAAT
GTAATAGTCCCTTCACGTCTATAGCTCAAATTAATCCTTTATCTCCAGGA
CAGATATACGTGTAGCATGCATGGCCTATACCAAACCAATCTTTCCTCCG
GTCCGCAATACTCGTCCTCAAACGTACCCCATCCTGCCTCCCACTGCTGA
ACTCGCCCTTCTCGCGTCGCCATTATTACAACTGTCACAATTGACTGGCG
CGTTGATTGGGCCGCAACTATCCAAGATCATCTTCGACCTGGTGCAGCTG
ACCTGGTACGCCGAGGCGATCCGGGCCGCTGATTACCAGATCTACGATGA
ACAGACCGAAGATTATTTCAATGGCGAGGTCCTGTATATCGAATACATGC
TCCTCAGCGATCGATATACCGAAACCGGAATTGTTAAGGAAGATGCATCG
ATCGAGGGATGCGTACGTCTCGTCTGCCTCCTCTTCCACAACAGCAGCAT
TTGGGCTTTCTATCCCGCCAATGCCGGCATCTTCCCACAGCCTATCATCG
CCTTGCGCGCAGCCCTGGAAGAGACTCTGGCCACGGGAGCCTTTACCGCG
CATCCGGATCTTCTGATCTGGATCCTGGTCATGGGTGCTTGTAGTTGTAA
TACTGCTCTCGCGCACGAACGCACGTTCTTTGTCCAGACCCTCGCGCGGA
TGGTGCACCTGCATGCCATCACGTCCTGGAAGGACCTCCGCACCCGCCTC
ATGCCGTTCTTCTATCTCGATCGATGTTATTTGGCTTCCTTGCAGCTTCT
GTGGAATGAGCTGCTGGTAGCGCTTGCATAATGAGAGAATCTCCAAGCAT
GATAAGGACCTGACTGTCAGCACCCACTACCAGACAAGCCCAGTGGAACA
GGACTTTTCCCTTGCCAACGTTTATACGCACGCCAGCAGGCCATGGCATT
CAAAAGATTCCGTTCTCTGCGCCATTGTATATCACTAAGCGATTTTCTCA
GAGCTCACCTTACGATTTGGGTATTTATCTGCGGCTTTTGCCTTTCTTTT
GACTGTTTCACCCCAGGAGATCGACGTACTTTTTATGGAAATATATCGCT
CGACGAAGGTAGAAGGGATATGGTCAAGGAGCGCAAGTATGACTCTGGCG
GCTCGCCCACACGGAGTATAACCTTATGTCAATTTTTGCTGGGTACAACT
GTCGTACCGAGAAGTCCAGGCCATTGTCAAAATAGTATGAATCTGTCTTT
AGTGGAGCTATATTCATGTTGGATCATTGATCATAACCATGCTAGCTAAA
GCATGCC back to topCoding sequence (CDS) from alignment at ch2:161064..163920+ >KJC3_001600-T1 ID=KJC3_001600-T1|Name=KJC3_001600-T1|organism=Aspergillus niger KJC3|type=CDS|length=7356bp|location=Sequence derived from alignment at ch2:161064..163920+ (Aspergillus niger KJC3)
ATGAATTCGTTTAATCATATGAGGGTGTTGCCTCCCGGGTTGGCCCGGAC
TGATGCCGTGGGAAACTCACCAGACTCCCAAGGGCATGGGCCCGATAATT
CTCCGAGCAGCAGCACCTACAACACAATACCTATCCCTCCTTTTCCCGAG
GAAGCTACAGAGCTGATTAGAGTATCTAAGGAACAGTCAACTTTGTCGTT
GTCCCCTGCCAAACCTGACGCTGCGAGAACAACCGGACCCCAAAAGTCGA
CCAGCGCTGTGGCCGGTCGCCCGACTCTCTTCTGGGTCCATGCGAGTCCA
AAATCTATTTCAGATGGCACCAGGCCCGAGGACCTGAAACGTATCCGATC
CCATGTGATGTCCGAGCATAATCGGAAGAAAAGGCTATCTAGCACTGAAT
TACATAAACGTCGATCATGGAAACGTGTAGCCTCCCAACCCCCAGAGACC
GATCGCGAATATGCGGAGGGCCCGGTCTGGCCCAAAGCTGAACTTGCAGC
TCAAGCATCTGTGCCGCAGCGCTCGACTGACAGTCAGGGCCAGGAAGATG
AATTAATTTGTTCAGTATCGTCCCCCATACCCCGGAGCCTGGGAATACAA
TCGGCCATAGATCCGTTCAACACCTCTCATACTCCTCTTACCGATCGCAT
GATGCGACATCTGCAGCATTTTTTAGTTGATCTTTCCCAAGACGGTGTGC
CTTTCCAGAACCGACGGCTTGACACGATCAAAAGGCATTGGGGGGAATTG
ATTCAGAACAATAAGGCCTGCCTTCATGCATGTATCTGTGTTGCTTCCTC
GGATATTGCTCTACGGACCAGTGAGCTGCCTCTCAAGAGTTCCAGCAATA
AACCATTTAGCCCCCTGCTGCTCGACACATTTCACCATCGGGGAGAAACA
ATCCGGCTGGTCAATAGCGGTCTCTCAGACCCTCTCAGAGCAGCTAGTGA
TGGCTTGATTGCGTCTGTATCCATGTTGCTGACGATCGAGATTGCGACAG
GTACACCCGCCTATCTGAAGATGCACCTAGCCGGACTACGTCAAATGGTA
GCACTGCGCAGGAGTTTCATAGACGTTCCGTATCCCGTACGATATCAGAT
TTCATGGACAGATATACGTGTAGCATGCATGGCCTATACCAAACCAATCT
TTCCTCCGGTCCGCAATACTCGTCCTCAAACGTACCCCATCCTGCCTCCC
ACTGCTGAACTCGCCCTTCTCGCGTCGCCATTATTACAACTGTCACAATT
GACTGGCGCGTTGATTGGGCCGCAACTATCCAAGATCATCTTCGACCTGG
TGCAGCTGACCTGGTACGCCGAGGCGATCCGGGCCGCTGATTACCAGATC
TACGATGAACAGACCGAAGATTATTTCAATGGCGAGGTCCTGTATATCGA
ATACATGCTCCTCAGCGATCGATATACCGAAACCGGAATTGTTAAGGAAG
ATGCATCGATCGAGGGATGCGTACGTCTCGTCTGCCTCCTCTTCCACAAC
AGCAGCATTTGGGCTTTCTATCCCGCCAATGCCGGCATCTTCCCACAGCC
TATCATCGCCTTGCGCGCAGCCCTGGAAGAGACTCTGGCCACGGGAGCCT
TTACCGCGCATCCGGATCTTCTGATCTGGATCCTGGTCATGGGTGCTTGT
AGTTGTAATACTGCTCTCGCGCACGAACGCACGTTCTTTGTCCAGACCCT
CGCGCGGATGGTGCACCTGCATGCCATCACGTCCTGGAAGGACCTCCGCA
CCCGCCTCATGCCGTTCTTCTATCTCGATCGATGTTATTTGGCTTCCTTG
CAGCTTCTGTGGAATGAGCTGCTGGTAGCGCTTGCATAAATGAATTCGTT
TAATCATATGAGGGTGTTGCCTCCCGGGTTGGCCCGGACTGATGCCGTGG
GAAACTCACCAGACTCCCAAGGGCATGGGCCCGATAATTCTCCGAGCAGC
AGCACCTACAACACAATACCTATCCCTCCTTTTCCCGAGGAAGCTACAGA
GCTGATTAGAGTATCTAAGGAACAGTCAACTTTGTCGTTGTCCCCTGCCA
AACCTGACGCTGCGAGAACAACCGGACCCCAAAAGTCGACCAGCGCTGTG
GCCGGTCGCCCGACTCTCTTCTGGGTCCATGCGAGTCCAAAATCTATTTC
AGATGGCACCAGGCCCGAGGACCTGAAACGTATCCGATCCCATGTGATGT
CCGAGCATAATCGGAAGAAAAGGCTATCTAGCACTGAATTACATAAACGT
CGATCATGGAAACGTGTAGCCTCCCAACCCCCAGAGACCGATCGCGAATA
TGCGGAGGGCCCGGTCTGGCCCAAAGCTGAACTTGCAGCTCAAGCATCTG
TGCCGCAGCGCTCGACTGACAGTCAGGGCCAGGAAGATGAATTAATTTGT
TCAGTATCGTCCCCCATACCCCGGAGCCTGGGAATACAATCGGCCATAGA
TCCGTTCAACACCTCTCATACTCCTCTTACCGATCGCATGATGCGACATC
TGCAGCATTTTTTAGTTGATCTTTCCCAAGACGGTGTGCCTTTCCAGAAC
CGACGGCTTGACACGATCAAAAGGCATTGGGGGGAATTGATTCAGAACAA
TAAGGCCTGCCTTCATGCATGTATCTGTGTTGCTTCCTCGGATATTGCTC
TACGGACCAGTGAGCTGCCTCTCAAGAGTTCCAGCAATAAACCATTTAGC
CCCCTGCTGCTCGACACATTTCACCATCGGGGAGAAACAATCCGGCTGGT
CAATAGCGGTCTCTCAGACCCTCTCAGAGCAGCTAGTGATGGCTTGATTG
CGTCTGTATCCATGTTGCTGACGATCGAGATTGCGACAGGTACACCCGCC
TATCTGAAGATGCACCTAGCCGGACTACGTCAAATGGTAGCACTGCGCAG
GAGTTTCATAGACGTTCCGTATCCCGTACGATATCAGATTTCATGGACAG
ATATACGTGTAGCATGCATGGCCTATACCAAACCAATCTTTCCTCCGGTC
CGCAATACTCGTCCTCAAACGTACCCCATCCTGCCTCCCACTGCTGAACT
CGCCCTTCTCGCGTCGCCATTATTACAACTGTCACAATTGACTGGCGCGT
TGATTGGGCCGCAACTATCCAAGATCATCTTCGACCTGGTGCAGCTGACC
TGGTACGCCGAGGCGATCCGGGCCGCTGATTACCAGATCTACGATGAACA
GACCGAAGATTATTTCAATGGCGAGGTCCTGTATATCGAATACATGCTCC
TCAGCGATCGATATACCGAAACCGGAATTGTTAAGGAAGATGCATCGATC
GAGGGATGCGTACGTCTCGTCTGCCTCCTCTTCCACAACAGCAGCATTTG
GGCTTTCTATCCCGCCAATGCCGGCATCTTCCCACAGCCTATCATCGCCT
TGCGCGCAGCCCTGGAAGAGACTCTGGCCACGGGAGCCTTTACCGCGCAT
CCGGATCTTCTGATCTGGATCCTGGTCATGGGTGCTTGTAGTTGTAATAC
TGCTCTCGCGCACGAACGCACGTTCTTTGTCCAGACCCTCGCGCGGATGG
TGCACCTGCATGCCATCACGTCCTGGAAGGACCTCCGCACCCGCCTCATG
CCGTTCTTCTATCTCGATCGATGTTATTTGGCTTCCTTGCAGCTTCTGTG
GAATGAGCTGCTGGTAGCGCTTGCATAAATGAATTCGTTTAATCATATGA
GGGTGTTGCCTCCCGGGTTGGCCCGGACTGATGCCGTGGGAAACTCACCA
GACTCCCAAGGGCATGGGCCCGATAATTCTCCGAGCAGCAGCACCTACAA
CACAATACCTATCCCTCCTTTTCCCGAGGAAGCTACAGAGCTGATTAGAG
TATCTAAGGAACAGTCAACTTTGTCGTTGTCCCCTGCCAAACCTGACGCT
GCGAGAACAACCGGACCCCAAAAGTCGACCAGCGCTGTGGCCGGTCGCCC
GACTCTCTTCTGGGTCCATGCGAGTCCAAAATCTATTTCAGATGGCACCA
GGCCCGAGGACCTGAAACGTATCCGATCCCATGTGATGTCCGAGCATAAT
CGGAAGAAAAGGCTATCTAGCACTGAATTACATAAACGTCGATCATGGAA
ACGTGTAGCCTCCCAACCCCCAGAGACCGATCGCGAATATGCGGAGGGCC
CGGTCTGGCCCAAAGCTGAACTTGCAGCTCAAGCATCTGTGCCGCAGCGC
TCGACTGACAGTCAGGGCCAGGAAGATGAATTAATTTGTTCAGTATCGTC
CCCCATACCCCGGAGCCTGGGAATACAATCGGCCATAGATCCGTTCAACA
CCTCTCATACTCCTCTTACCGATCGCATGATGCGACATCTGCAGCATTTT
TTAGTTGATCTTTCCCAAGACGGTGTGCCTTTCCAGAACCGACGGCTTGA
CACGATCAAAAGGCATTGGGGGGAATTGATTCAGAACAATAAGGCCTGCC
TTCATGCATGTATCTGTGTTGCTTCCTCGGATATTGCTCTACGGACCAGT
GAGCTGCCTCTCAAGAGTTCCAGCAATAAACCATTTAGCCCCCTGCTGCT
CGACACATTTCACCATCGGGGAGAAACAATCCGGCTGGTCAATAGCGGTC
TCTCAGACCCTCTCAGAGCAGCTAGTGATGGCTTGATTGCGTCTGTATCC
ATGTTGCTGACGATCGAGATTGCGACAGGTACACCCGCCTATCTGAAGAT
GCACCTAGCCGGACTACGTCAAATGGTAGCACTGCGCAGGAGTTTCATAG
ACGTTCCGTATCCCGTACGATATCAGATTTCATGGACAGATATACGTGTA
GCATGCATGGCCTATACCAAACCAATCTTTCCTCCGGTCCGCAATACTCG
TCCTCAAACGTACCCCATCCTGCCTCCCACTGCTGAACTCGCCCTTCTCG
CGTCGCCATTATTACAACTGTCACAATTGACTGGCGCGTTGATTGGGCCG
CAACTATCCAAGATCATCTTCGACCTGGTGCAGCTGACCTGGTACGCCGA
GGCGATCCGGGCCGCTGATTACCAGATCTACGATGAACAGACCGAAGATT
ATTTCAATGGCGAGGTCCTGTATATCGAATACATGCTCCTCAGCGATCGA
TATACCGAAACCGGAATTGTTAAGGAAGATGCATCGATCGAGGGATGCGT
ACGTCTCGTCTGCCTCCTCTTCCACAACAGCAGCATTTGGGCTTTCTATC
CCGCCAATGCCGGCATCTTCCCACAGCCTATCATCGCCTTGCGCGCAGCC
CTGGAAGAGACTCTGGCCACGGGAGCCTTTACCGCGCATCCGGATCTTCT
GATCTGGATCCTGGTCATGGGTGCTTGTAGTTGTAATACTGCTCTCGCGC
ACGAACGCACGTTCTTTGTCCAGACCCTCGCGCGGATGGTGCACCTGCAT
GCCATCACGTCCTGGAAGGACCTCCGCACCCGCCTCATGCCGTTCTTCTA
TCTCGATCGATGTTATTTGGCTTCCTTGCAGCTTCTGTGGAATGAGCTGC
TGGTAGCGCTTGCATAAATGAATTCGTTTAATCATATGAGGGTGTTGCCT
CCCGGGTTGGCCCGGACTGATGCCGTGGGAAACTCACCAGACTCCCAAGG
GCATGGGCCCGATAATTCTCCGAGCAGCAGCACCTACAACACAATACCTA
TCCCTCCTTTTCCCGAGGAAGCTACAGAGCTGATTAGAGTATCTAAGGAA
CAGTCAACTTTGTCGTTGTCCCCTGCCAAACCTGACGCTGCGAGAACAAC
CGGACCCCAAAAGTCGACCAGCGCTGTGGCCGGTCGCCCGACTCTCTTCT
GGGTCCATGCGAGTCCAAAATCTATTTCAGATGGCACCAGGCCCGAGGAC
CTGAAACGTATCCGATCCCATGTGATGTCCGAGCATAATCGGAAGAAAAG
GCTATCTAGCACTGAATTACATAAACGTCGATCATGGAAACGTGTAGCCT
CCCAACCCCCAGAGACCGATCGCGAATATGCGGAGGGCCCGGTCTGGCCC
AAAGCTGAACTTGCAGCTCAAGCATCTGTGCCGCAGCGCTCGACTGACAG
TCAGGGCCAGGAAGATGAATTAATTTGTTCAGTATCGTCCCCCATACCCC
GGAGCCTGGGAATACAATCGGCCATAGATCCGTTCAACACCTCTCATACT
CCTCTTACCGATCGCATGATGCGACATCTGCAGCATTTTTTAGTTGATCT
TTCCCAAGACGGTGTGCCTTTCCAGAACCGACGGCTTGACACGATCAAAA
GGCATTGGGGGGAATTGATTCAGAACAATAAGGCCTGCCTTCATGCATGT
ATCTGTGTTGCTTCCTCGGATATTGCTCTACGGACCAGTGAGCTGCCTCT
CAAGAGTTCCAGCAATAAACCATTTAGCCCCCTGCTGCTCGACACATTTC
ACCATCGGGGAGAAACAATCCGGCTGGTCAATAGCGGTCTCTCAGACCCT
CTCAGAGCAGCTAGTGATGGCTTGATTGCGTCTGTATCCATGTTGCTGAC
GATCGAGATTGCGACAGGTACACCCGCCTATCTGAAGATGCACCTAGCCG
GACTACGTCAAATGGTAGCACTGCGCAGGAGTTTCATAGACGTTCCGTAT
CCCGTACGATATCAGATTTCATGGACAGATATACGTGTAGCATGCATGGC
CTATACCAAACCAATCTTTCCTCCGGTCCGCAATACTCGTCCTCAAACGT
ACCCCATCCTGCCTCCCACTGCTGAACTCGCCCTTCTCGCGTCGCCATTA
TTACAACTGTCACAATTGACTGGCGCGTTGATTGGGCCGCAACTATCCAA
GATCATCTTCGACCTGGTGCAGCTGACCTGGTACGCCGAGGCGATCCGGG
CCGCTGATTACCAGATCTACGATGAACAGACCGAAGATTATTTCAATGGC
GAGGTCCTGTATATCGAATACATGCTCCTCAGCGATCGATATACCGAAAC
CGGAATTGTTAAGGAAGATGCATCGATCGAGGGATGCGTACGTCTCGTCT
GCCTCCTCTTCCACAACAGCAGCATTTGGGCTTTCTATCCCGCCAATGCC
GGCATCTTCCCACAGCCTATCATCGCCTTGCGCGCAGCCCTGGAAGAGAC
TCTGGCCACGGGAGCCTTTACCGCGCATCCGGATCTTCTGATCTGGATCC
TGGTCATGGGTGCTTGTAGTTGTAATACTGCTCTCGCGCACGAACGCACG
TTCTTTGTCCAGACCCTCGCGCGGATGGTGCACCTGCATGCCATCACGTC
CTGGAAGGACCTCCGCACCCGCCTCATGCCGTTCTTCTATCTCGATCGAT
GTTATTTGGCTTCCTTGCAGCTTCTGTGGAATGAGCTGCTGGTAGCGCTT
GCATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001600-T1.utr5p1 | KJC3_001600-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001600-T1.utr3p1 | KJC3_001600-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:161064..163920 + |
|
