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KJC3_001604-T1, KJC3_001604-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001604-T1
Unique NameKJC3_001604-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:176964..178736+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001604-T1 ID=KJC3_001604-T1|Name=KJC3_001604-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1773bp|location=Sequence derived from alignment at ch2:176964..178736+ (Aspergillus niger KJC3)
CCATCATTGACATTATTTTCCCCCTCGCCAGACACCGTTACCATGTCTTT
GCCCGTCAGAAAAACAAATGCCAAAATCCAACAAGTCATAAAAGACTTGA
AGGAGATCACCGCCCACCCTATCGATGCCTCCAAGGTTCATATTGAGAAT
CCCATTGGATGTGTGCAAGTGCCAGTCGGATTGGCCGGACCCTTGCGCGT
GTGGGAGACCAGCGCTGCTGGCGAGGAGTGTGAAGAAGTCTATGCACCGC
TGGCTACCACCGAAGCAGCTCTAGTTGCGAGTTGCTGTCGCGGCTGCAAG
GCGTTCAACCGGAGTGGGGGCATCCACATTGTTGCTCTTTACGATGCCAT
GGCCAAGCAAGGAATCCCACCCATTCATCCTTCCACCTATCAAGGTGAGG
TCCGTAAGCATCTGAAACTAACTGGGGAGTAGATGTCCCGCGTTCATATT
CGACACGCCGGCCGACGCGTTGGCGTTCGCTCAGCAAGTTCCGGCCTTTC
ACAGCGAATTTAAACGGCTTGCTGAATCCACTAGTCGCCGCATTCAGTTT
CTATCCGTAACTCCGACCGTAATGGGATCTGCAACTCATCTGCGTTTCAA
CTACAGATGTGGCGATGCGGCCGGCCAGAATATGGCCACCATCGCAACCC
ATCAAGCCTGCCACGGGCTGCTGTTGGACACTCCCCTCAGGGAGGAGCTG
AAAATTCGCAGCTTCCAATTCGAAGGGGGCATGTCCGCGGAAAAGAGAGC
CAGCTGGTCACATACAAAGGAACCACACGGCGTCGAATCCCTGGCATGGG
GGGTAATCACCAACGAGGTAGCCGAGGAACTGCTGGGATGCTCAACCGAA
ACCATCTACCAGGGTTTCAGTCGTGCGCAAAATGCGGCTGTGCGACAAGG
CGGGTACGGCTTTGCGGGAAACCCGATGAACATTGTGACGGCTATCTTCA
TCGCCACCGGGCAGGATGTTGCCAGCATTGCTGAGTCGTGTTGGGCTCAG
CTGACGCCTGAATATAACTACGAGACGAAAGTTCTGACTCTGTCACTGTA
TATTCCGTCACTTCCGGTGGGAGTAGTTGGCGGAGGCACCCACCTGGGTC
CTCAGCGTGAGGCTCTTGACATCATGAAGTGCAGTGGACCTGGGAAGAAA
CGTCGACTTGCTGCACTAATGACGGCGTTTGCCCTGGCGTTAGACCTTAG
CACCATAGCAGCGATGGCTAATGATACGTTTTCGCAGGCTCATGCACGGC
TTCGCAGAAAGCCGGTGGCCGATACCAAAGCAAAGCTTTAGATGCGGACC
CGTATGACCGGGGAACCATTATGTCCAAACGGGAGCGATTAGATATTTTC
AGATCATTATATATCCCGTTCTCCTTGCATTTTCAATATTTCTTAGTCTT
ATTACGCCATCCCTCGCAGCAGGACTTGCTCTTGGCCTAGCTAATGTAAG
TAGAGCACCACTGAAAGTAGCACCAACTAATTCCAGACGTTCCAATGCTC
ACAGAGAATTTGTCTTTCATAGCTAGTTCAAACTTTGCATGGAGTGTCTA
ACGCAGTCTTCGCACCATTCTCATCTTTGACGGTCACGGGTAGCACGGTC
ACCGCCTCAACCCCGTCCATTCGATCAGGATCGAATTCGTCCCAGTACTC
CTTGGGCTCCTTCCACCCACTTGTCTTTTCCATTTTAGCGGGAGGCCACG
CCAGGCATGCGAGATAATACACCCCGAATGCAATGAGAAGGCCGACAGGG
TACGCGACAAAGTAAAACCGCTG
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Coding sequence (CDS) from alignment at ch2:176964..178736+

>KJC3_001604-T1 ID=KJC3_001604-T1|Name=KJC3_001604-T1|organism=Aspergillus niger KJC3|type=CDS|length=2346bp|location=Sequence derived from alignment at ch2:176964..178736+ (Aspergillus niger KJC3)
ATGTCTTTGCCCGTCAGAAAAACAAATGCCAAAATCCAACAAGTCATAAA
AGACTTGAAGGAGATCACCGCCCACCCTATCGATGCCTCCAAGGTTCATA
TTGAGAATCCCATTGGATGTGTGCAAGTGCCAGTCGGATTGGCCGGACCC
TTGCGCGTGTGGGAGACCAGCGCTGCTGGCGAGGAGTGTGAAGAAGTCTA
TGCACCGCTGGCTACCACCGAAGCAGCTCTAGTTGCGAGTTGCTGTCGCG
GCTGCAAGGCGTTCAACCGGAGTGGGGGCATCCACATTGTTGCTCTTTAC
GATGCCATGGCCAAATGTCCCGCGTTCATATTCGACACGCCGGCCGACGC
GTTGGCGTTCGCTCAGCAAGTTCCGGCCTTTCACAGCGAATTTAAACGGC
TTGCTGAATCCACTAGTCGCCGCATTCAGTTTCTATCCGTAACTCCGACC
GTAATGGGATCTGCAACTCATCTGCGTTTCAACTACAGATGTGGCGATGC
GGCCGGCCAGAATATGGCCACCATCGCAACCCATCAAGCCTGCCACGGGC
TGCTGTTGGACACTCCCCTCAGGGAGGAGCTGAAAATTCGCAGCTTCCAA
TTCGAAGGGGGCATGTCCGCGGAAAAGAGAGCCAGCTGGTCACATACAAA
GGAACCACACGGCGTCGAATCCCTGGCATGGGGGGTAATCACCAACGAGG
TAGCCGAGGAACTGCTGGGATGCTCAACCGAAACCATCTACCAGGGTTTC
AGTCGTGCGCAAAATGCGGCTGTGCGACAAGGCGGGTACGGCTTTGCGGG
AAACCCGATGAACATTGTGACGGCTATCTTCATCGCCACCGGGCAGGATG
TTGCCAGCATTGCTGAGTCGTGTTGGGCTCAGCTGACGCCTGAATATAAC
TACGAGACGAAAGTTCTGACTCTGTCACTGTATATTCCGTCACTTCCGGT
GGGAGTAGTTGGCGGAGGCACCCACCTGGGTCCTCAGCGTGAGGCTCTTG
ACATCATGAAGTGCAGTGGACCTGGGAAGAAACGTCGACTTGCTGCACTA
ATGACGGCGTTTGCCCTGGCGTTAGACCTTAGCACCATAGCAGCGATGGC
TAATGATACGTTTTCGCAGGCTCATGCACGGCTTCGCAGAAAGCCGGTGG
CCGATACCAAAGCAAAGCTTTAGATGTCTTTGCCCGTCAGAAAAACAAAT
GCCAAAATCCAACAAGTCATAAAAGACTTGAAGGAGATCACCGCCCACCC
TATCGATGCCTCCAAGGTTCATATTGAGAATCCCATTGGATGTGTGCAAG
TGCCAGTCGGATTGGCCGGACCCTTGCGCGTGTGGGAGACCAGCGCTGCT
GGCGAGGAGTGTGAAGAAGTCTATGCACCGCTGGCTACCACCGAAGCAGC
TCTAGTTGCGAGTTGCTGTCGCGGCTGCAAGGCGTTCAACCGGAGTGGGG
GCATCCACATTGTTGCTCTTTACGATGCCATGGCCAAATGTCCCGCGTTC
ATATTCGACACGCCGGCCGACGCGTTGGCGTTCGCTCAGCAAGTTCCGGC
CTTTCACAGCGAATTTAAACGGCTTGCTGAATCCACTAGTCGCCGCATTC
AGTTTCTATCCGTAACTCCGACCGTAATGGGATCTGCAACTCATCTGCGT
TTCAACTACAGATGTGGCGATGCGGCCGGCCAGAATATGGCCACCATCGC
AACCCATCAAGCCTGCCACGGGCTGCTGTTGGACACTCCCCTCAGGGAGG
AGCTGAAAATTCGCAGCTTCCAATTCGAAGGGGGCATGTCCGCGGAAAAG
AGAGCCAGCTGGTCACATACAAAGGAACCACACGGCGTCGAATCCCTGGC
ATGGGGGGTAATCACCAACGAGGTAGCCGAGGAACTGCTGGGATGCTCAA
CCGAAACCATCTACCAGGGTTTCAGTCGTGCGCAAAATGCGGCTGTGCGA
CAAGGCGGGTACGGCTTTGCGGGAAACCCGATGAACATTGTGACGGCTAT
CTTCATCGCCACCGGGCAGGATGTTGCCAGCATTGCTGAGTCGTGTTGGG
CTCAGCTGACGCCTGAATATAACTACGAGACGAAAGTTCTGACTCTGTCA
CTGTATATTCCGTCACTTCCGGTGGGAGTAGTTGGCGGAGGCACCCACCT
GGGTCCTCAGCGTGAGGCTCTTGACATCATGAAGTGCAGTGGACCTGGGA
AGAAACGTCGACTTGCTGCACTAATGACGGCGTTTGCCCTGGCGTTAGAC
CTTAGCACCATAGCAGCGATGGCTAATGATACGTTTTCGCAGGCTCATGC
ACGGCTTCGCAGAAAGCCGGTGGCCGATACCAAAGCAAAGCTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015936coenzyme A metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0004420hydroxymethylglutaryl-CoA reductase (NADPH) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001604KJC3_001604Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001604-T1KJC3_001604-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001604-T1.utr5p1KJC3_001604-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001604-T1.exon1KJC3_001604-T1.exon1Aspergillus niger KJC3exon
KJC3_001604-T1.exon2KJC3_001604-T1.exon2Aspergillus niger KJC3exon
KJC3_001604-T1.exon3KJC3_001604-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001604-T1.cdsKJC3_001604-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001604-T1.utr3p1KJC3_001604-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_001604-T1.utr3p2KJC3_001604-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009029
DBxrefInterPro:IPR023076
DBxrefInterPro:IPR023074
DBxrefInterPro:IPR009023
DBxrefInterPro:IPR002202
DBxrefPFAM:PF00368
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:176964..178736 +
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