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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:205013..206684- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001615-T1 ID=KJC3_001615-T1|Name=KJC3_001615-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1672bp|location=Sequence derived from alignment at ch2:205013..206684- (Aspergillus niger KJC3)
ATGGAAGAAGTCAAGAAACCTGAGGACAATGTACAGATTAACATTAATCT
CGACAGCTCAACCCATGATGATAACCTTCCTGTCGCTACAATCCCGTTCA
AGGAACAGTTGAAGCTGGTCATGCAATACAAGCGTGCTGTCTGGGCTGGT
GAGTGTTTGCATTACGATTCATCTCCACGGGATCTAACTGTTACGGAAAA
GCCCTCGCGTGCTCGACAACCACCATCCTGATTGGATATGACCTGGCCTT
GATTGGTTCGATCATCGCCAACACCGAATTCATCAAGCAGTTTGGCGTGT
ATGACCCTGCATCGCAGGCCTGGTCACTCCCCGCAAACCAACAGCTTGTG
TGGTCTATTATCCAGTATGTCTCTGCTATGGCAGCTGCTATCGTGTCTGG
CTTGGTGAATGATATTTTCGGGCGTCGAATATGCTTCCTATTGACCGTCT
CGTGAGTCAATTAAGCCATTTCTTGCGGTGCTCAACCCTCGGGGTAACTG
ACATCTCCTTGCTCCCTCACAGACTCACCATCACCGGGACGTTTGTGGAG
CTATTTTCTACAGAATGGAAAACTTGGGTAGTGGCCAAGTTCTTCATGGG
TGCAGCTATGGGATCCATGCAGGCGAACACGCAAACTTTTGTATCAGAAA
TCACCCCGACAGCCATCCGTGGCCTGACTCTGTCCCTCTTCCAGTTCTGG
ATTATAGTCGGCCAGCTTATTGCATCATGTGTCCTAGAGGGAACAAGCCA
TGTCAGCAGCTCATGGTCCTGGCGAGGGGCTGTCGCGTCCCAGTTTGGAC
CTGCCCTGTTTTGTCTAGTCATGTTCTTCATCTTTGTCCCTGAATCACCA
TACTACCTCGTCTCCCGGGACCGCCTCGAGGACGCTAAAGCAGCACTTGC
CCGCCTCCGAGCAGCCGAGATTGACAGCACCACCCTCGATATTGAAGTCA
GCCAAATCCAAGCAACTTTGCTCCACGAGCGCCAGTCCCGTGCCATCGGT
TCCTCGTACCTCGAATGTTTTCAGGGCATCAACCTCCGCCGCACCCTCCT
CGCCTGCCTCCCCGTGATCATGCAAATCCTTACAGGCTTCCCACTCTGTG
GCAACTATCTTTCTTATTTCCTCACCCTGTCTGGCTTTGAAAACGCTTTC
CTGATCACGGTCATTCAAGTGATTGTCGCACTATTTGCTGCGCTGTGGGC
ATTTTCTCTTGTCGAGCGCGTCGGTCGACGGCCCCAAATGCTCGTCGGAT
CATCTGGCATGCTTCTCTGCCTCCTCGTTATTTCAATTCTTGGGTTCGTG
GGCGCTGGGGAAGGTTGGAACTACAGTGCCCTCGCAGCTTTCTGCATCAT
TTGGGCCCTGTTCTACTACTCATCCGTCGGCGCAGTCGGGTGGGCTATCG
TTGGCGAAATCTCATCCCCCCGGTTGCGGGCCAAGACAACCTCGATCGTA
GCCTTCACTGTTTCACTAATCAACATGGCCTGGTCCATCGCGATCCCGTA
TCTTGTGAACAAGGAGGATGCTAACCTGGGCGCCAAGACGGGATTGATCT
TCCTGGGCACTGGACTCGCTTGTGCAATTGTTTGTTTTTTCTGTTTGCCG
GAGACCAAAGGGCGGTCATTTGATATGTTGGACGCATTGTTTGAGATGAA
AACATCAGCGAGGAGGTTCTGA back to topCoding sequence (CDS) from alignment at ch2:205013..206684- >KJC3_001615-T1 ID=KJC3_001615-T1|Name=KJC3_001615-T1|organism=Aspergillus niger KJC3|type=CDS|length=4644bp|location=Sequence derived from alignment at ch2:205013..206684- (Aspergillus niger KJC3)
ACTCACCATCACCGGGACGTTTGTGGAGCTATTTTCTACAGAATGGAAAA
CTTGGGTAGTGGCCAAGTTCTTCATGGGTGCAGCTATGGGATCCATGCAG
GCGAACACGCAAACTTTTGTATCAGAAATCACCCCGACAGCCATCCGTGG
CCTGACTCTGTCCCTCTTCCAGTTCTGGATTATAGTCGGCCAGCTTATTG
CATCATGTGTCCTAGAGGGAACAAGCCATGTCAGCAGCTCATGGTCCTGG
CGAGGGGCTGTCGCGTCCCAGTTTGGACCTGCCCTGTTTTGTCTAGTCAT
GTTCTTCATCTTTGTCCCTGAATCACCATACTACCTCGTCTCCCGGGACC
GCCTCGAGGACGCTAAAGCAGCACTTGCCCGCCTCCGAGCAGCCGAGATT
GACAGCACCACCCTCGATATTGAAGTCAGCCAAATCCAAGCAACTTTGCT
CCACGAGCGCCAGTCCCGTGCCATCGGTTCCTCGTACCTCGAATGTTTTC
AGGGCATCAACCTCCGCCGCACCCTCCTCGCCTGCCTCCCCGTGATCATG
CAAATCCTTACAGGCTTCCCACTCTGTGGCAACTATCTTTCTTATTTCCT
CACCCTGTCTGGCTTTGAAAACGCTTTCCTGATCACGGTCATTCAAGTGA
TTGTCGCACTATTTGCTGCGCTGTGGGCATTTTCTCTTGTCGAGCGCGTC
GGTCGACGGCCCCAAATGCTCGTCGGATCATCTGGCATGCTTCTCTGCCT
CCTCGTTATTTCAATTCTTGGGTTCGTGGGCGCTGGGGAAGGTTGGAACT
ACAGTGCCCTCGCAGCTTTCTGCATCATTTGGGCCCTGTTCTACTACTCA
TCCGTCGGCGCAGTCGGGTGGGCTATCGTTGGCGAAATCTCATCCCCCCG
GTTGCGGGCCAAGACAACCTCGATCGTAGCCTTCACTGTTTCACTAATCA
ACATGGCCTGGTCCATCGCGATCCCGTATCTTGTGAACAAGGAGGATGCT
AACCTGGGCGCCAAGACGGGATTGATCTTCCTGGGCACTGGACTCGCTTG
TGCAATTGTTTGTTTTTTCTGTTTGCCGGAGACCAAAGGGCGGTCATTTG
ATATGTTGGACGCATTGTTTGAGATGAAAACATCAGCGAGGAGGTTCTGA
CCCTCGCGTGCTCGACAACCACCATCCTGATTGGATATGACCTGGCCTTG
ATTGGTTCGATCATCGCCAACACCGAATTCATCAAGCAGTTTGGCGTGTA
TGACCCTGCATCGCAGGCCTGGTCACTCCCCGCAAACCAACAGCTTGTGT
GGTCTATTATCCAGTATGTCTCTGCTATGGCAGCTGCTATCGTGTCTGGC
TTGGTGAATGATATTTTCGGGCGTCGAATATGCTTCCTATTGACCGTCTC
ATGGAAGAAGTCAAGAAACCTGAGGACAATGTACAGATTAACATTAATCT
CGACAGCTCAACCCATGATGATAACCTTCCTGTCGCTACAATCCCGTTCA
AGGAACAGTTGAAGCTGGTCATGCAATACAAGCGTGCTGTCTGGGCTGAC
TCACCATCACCGGGACGTTTGTGGAGCTATTTTCTACAGAATGGAAAACT
TGGGTAGTGGCCAAGTTCTTCATGGGTGCAGCTATGGGATCCATGCAGGC
GAACACGCAAACTTTTGTATCAGAAATCACCCCGACAGCCATCCGTGGCC
TGACTCTGTCCCTCTTCCAGTTCTGGATTATAGTCGGCCAGCTTATTGCA
TCATGTGTCCTAGAGGGAACAAGCCATGTCAGCAGCTCATGGTCCTGGCG
AGGGGCTGTCGCGTCCCAGTTTGGACCTGCCCTGTTTTGTCTAGTCATGT
TCTTCATCTTTGTCCCTGAATCACCATACTACCTCGTCTCCCGGGACCGC
CTCGAGGACGCTAAAGCAGCACTTGCCCGCCTCCGAGCAGCCGAGATTGA
CAGCACCACCCTCGATATTGAAGTCAGCCAAATCCAAGCAACTTTGCTCC
ACGAGCGCCAGTCCCGTGCCATCGGTTCCTCGTACCTCGAATGTTTTCAG
GGCATCAACCTCCGCCGCACCCTCCTCGCCTGCCTCCCCGTGATCATGCA
AATCCTTACAGGCTTCCCACTCTGTGGCAACTATCTTTCTTATTTCCTCA
CCCTGTCTGGCTTTGAAAACGCTTTCCTGATCACGGTCATTCAAGTGATT
GTCGCACTATTTGCTGCGCTGTGGGCATTTTCTCTTGTCGAGCGCGTCGG
TCGACGGCCCCAAATGCTCGTCGGATCATCTGGCATGCTTCTCTGCCTCC
TCGTTATTTCAATTCTTGGGTTCGTGGGCGCTGGGGAAGGTTGGAACTAC
AGTGCCCTCGCAGCTTTCTGCATCATTTGGGCCCTGTTCTACTACTCATC
CGTCGGCGCAGTCGGGTGGGCTATCGTTGGCGAAATCTCATCCCCCCGGT
TGCGGGCCAAGACAACCTCGATCGTAGCCTTCACTGTTTCACTAATCAAC
ATGGCCTGGTCCATCGCGATCCCGTATCTTGTGAACAAGGAGGATGCTAA
CCTGGGCGCCAAGACGGGATTGATCTTCCTGGGCACTGGACTCGCTTGTG
CAATTGTTTGTTTTTTCTGTTTGCCGGAGACCAAAGGGCGGTCATTTGAT
ATGTTGGACGCATTGTTTGAGATGAAAACATCAGCGAGGAGGTTCTGACC
CTCGCGTGCTCGACAACCACCATCCTGATTGGATATGACCTGGCCTTGAT
TGGTTCGATCATCGCCAACACCGAATTCATCAAGCAGTTTGGCGTGTATG
ACCCTGCATCGCAGGCCTGGTCACTCCCCGCAAACCAACAGCTTGTGTGG
TCTATTATCCAGTATGTCTCTGCTATGGCAGCTGCTATCGTGTCTGGCTT
GGTGAATGATATTTTCGGGCGTCGAATATGCTTCCTATTGACCGTCTCAT
GGAAGAAGTCAAGAAACCTGAGGACAATGTACAGATTAACATTAATCTCG
ACAGCTCAACCCATGATGATAACCTTCCTGTCGCTACAATCCCGTTCAAG
GAACAGTTGAAGCTGGTCATGCAATACAAGCGTGCTGTCTGGGCTGACTC
ACCATCACCGGGACGTTTGTGGAGCTATTTTCTACAGAATGGAAAACTTG
GGTAGTGGCCAAGTTCTTCATGGGTGCAGCTATGGGATCCATGCAGGCGA
ACACGCAAACTTTTGTATCAGAAATCACCCCGACAGCCATCCGTGGCCTG
ACTCTGTCCCTCTTCCAGTTCTGGATTATAGTCGGCCAGCTTATTGCATC
ATGTGTCCTAGAGGGAACAAGCCATGTCAGCAGCTCATGGTCCTGGCGAG
GGGCTGTCGCGTCCCAGTTTGGACCTGCCCTGTTTTGTCTAGTCATGTTC
TTCATCTTTGTCCCTGAATCACCATACTACCTCGTCTCCCGGGACCGCCT
CGAGGACGCTAAAGCAGCACTTGCCCGCCTCCGAGCAGCCGAGATTGACA
GCACCACCCTCGATATTGAAGTCAGCCAAATCCAAGCAACTTTGCTCCAC
GAGCGCCAGTCCCGTGCCATCGGTTCCTCGTACCTCGAATGTTTTCAGGG
CATCAACCTCCGCCGCACCCTCCTCGCCTGCCTCCCCGTGATCATGCAAA
TCCTTACAGGCTTCCCACTCTGTGGCAACTATCTTTCTTATTTCCTCACC
CTGTCTGGCTTTGAAAACGCTTTCCTGATCACGGTCATTCAAGTGATTGT
CGCACTATTTGCTGCGCTGTGGGCATTTTCTCTTGTCGAGCGCGTCGGTC
GACGGCCCCAAATGCTCGTCGGATCATCTGGCATGCTTCTCTGCCTCCTC
GTTATTTCAATTCTTGGGTTCGTGGGCGCTGGGGAAGGTTGGAACTACAG
TGCCCTCGCAGCTTTCTGCATCATTTGGGCCCTGTTCTACTACTCATCCG
TCGGCGCAGTCGGGTGGGCTATCGTTGGCGAAATCTCATCCCCCCGGTTG
CGGGCCAAGACAACCTCGATCGTAGCCTTCACTGTTTCACTAATCAACAT
GGCCTGGTCCATCGCGATCCCGTATCTTGTGAACAAGGAGGATGCTAACC
TGGGCGCCAAGACGGGATTGATCTTCCTGGGCACTGGACTCGCTTGTGCA
ATTGTTTGTTTTTTCTGTTTGCCGGAGACCAAAGGGCGGTCATTTGATAT
GTTGGACGCATTGTTTGAGATGAAAACATCAGCGAGGAGGTTCTGACCCT
CGCGTGCTCGACAACCACCATCCTGATTGGATATGACCTGGCCTTGATTG
GTTCGATCATCGCCAACACCGAATTCATCAAGCAGTTTGGCGTGTATGAC
CCTGCATCGCAGGCCTGGTCACTCCCCGCAAACCAACAGCTTGTGTGGTC
TATTATCCAGTATGTCTCTGCTATGGCAGCTGCTATCGTGTCTGGCTTGG
TGAATGATATTTTCGGGCGTCGAATATGCTTCCTATTGACCGTCTCATGG
AAGAAGTCAAGAAACCTGAGGACAATGTACAGATTAACATTAATCTCGAC
AGCTCAACCCATGATGATAACCTTCCTGTCGCTACAATCCCGTTCAAGGA
ACAGTTGAAGCTGGTCATGCAATACAAGCGTGCTGTCTGGGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:205013..206684 - |
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