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KJC3_001620-T1, KJC3_001620-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001620-T1
Unique NameKJC3_001620-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:219135..220328+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001620-T1 ID=KJC3_001620-T1|Name=KJC3_001620-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1194bp|location=Sequence derived from alignment at ch2:219135..220328+ (Aspergillus niger KJC3)
ATGCTGTCCGCTTTTTCCGACACCGCTGTAGGCACCATGGGCAGACTGTT
GCTCCGGAGTCCCTCTCTCAGATATCCTGAGGACGAAGAGGGTTTCCAAC
TGCTTCAATTTGCTCGTGCATGGTCTGTAATAGAAGTTCCGAACTCTAGT
GCCATATGGCTAGATGAGGAAAGTGGAATGCAGAGACGAGACGAGCTGGT
CAATCCCTCTTTTCCGACGACGGCCTTGGAGACTCAAGAGGCAGTTCCCT
CTACTCCCACTGTACCTAGATATAGGGACAAGATAATAATTGTTGACTGG
TACGGGGATGACGATCCTTCCAACCCCTTGAATTGGTCCTTTCAAAAGAA
GGCGGTCGTATTCGTCATTATCAACTTCAGTGCCTGCGTCGTCTACATGT
GCGCAGCAATTTATACGCCATCCCAACCAGAAATTGAACGCACTTTTAAT
ATCTCAGCGACCATCTCCAGCTTGGGACTTGCTCTTTTCCTTCTAGGATA
CGGTAGCGGCTCGCTGCTCTTTGCGCCAATCTCCGAGATTCCCTCGATTG
GTCGAAACTGGCCCTATCTAATTTCCTTATTCATCTTCGTCGTGCTCGCA
ATCCCAACGGCATTATCGGAGACATTTGAGGGGTTGATGATTTTACGTTT
CATTCAAGGCTTCTTCGGATCCCCGATACTCTCGACTGGGGGAGCATCAT
TGAGAGATATCTCGGATCCAAGTATGCGACCATATGTGCTGTATTCCTGG
GCAGATTTTGCATTCGCAGGGCCTTCAATAGGCAACATAATTGCGGGATA
CGGCGTGCCCCAACTGGGCTGGCGGTGGAGCCTGTGGGAAATTCTGATTT
GCACTAGCCCTGCTTTGATCTTACACGTTCGTTAGAGTATCCGTGTGATC
TATTATCAAATATTCTAATAGTATATACCGCAGTTATTTCTTCCGGAGAC
ATCTGAGGAGAACATTCTCCTTCGCCGCGCTCAGCGAATTCGCCAGGCAA
CCGGCCTTGGTTATTACCGGGCCAAATCCGAGCTCAACGCTGAAAGGTCT
ACATGGAAGGATCGTTTCTGGGGTTTTCTCGTCATGCCCTGGAAAATCAA
CGTGCTAGACCCTTCTGTCATGTTCACTAGCATATACACTGGGTTCATCT
ATGCCATTTTCAATTCCATGTTTGAGTTCTTTGATATTATATAG
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Coding sequence (CDS) from alignment at ch2:219135..220328+

>KJC3_001620-T1 ID=KJC3_001620-T1|Name=KJC3_001620-T1|organism=Aspergillus niger KJC3|type=CDS|length=2274bp|location=Sequence derived from alignment at ch2:219135..220328+ (Aspergillus niger KJC3)
ATGCTGTCCGCTTTTTCCGACACCGCTGTAGGCACCATGGGCAGACTGTT
GCTCCGGAGTCCCTCTCTCAGATATCCTGAGGACGAAGAGGGTTTCCAAC
TGCTTCAATTTGCTCGTGCATGGTCTGTAATAGAAGTTCCGAACTCTAGT
GCCATATGGCTAGATGAGGAAAGTGGAATGCAGAGACGAGACGAGCTGGT
CAATCCCTCTTTTCCGACGACGGCCTTGGAGACTCAAGAGGCAGTTCCCT
CTACTCCCACTGTACCTAGATATAGGGACAAGATAATAATTGTTGACTGG
TACGGGGATGACGATCCTTCCAACCCCTTGAATTGGTCCTTTCAAAAGAA
GGCGGTCGTATTCGTCATTATCAACTTCAGTGCCTGCGTCGTCTACATGT
GCGCAGCAATTTATACGCCATCCCAACCAGAAATTGAACGCACTTTTAAT
ATCTCAGCGACCATCTCCAGCTTGGGACTTGCTCTTTTCCTTCTAGGATA
CGGTAGCGGCTCGCTGCTCTTTGCGCCAATCTCCGAGATTCCCTCGATTG
GTCGAAACTGGCCCTATCTAATTTCCTTATTCATCTTCGTCGTGCTCGCA
ATCCCAACGGCATTATCGGAGACATTTGAGGGGTTGATGATTTTACGTTT
CATTCAAGGCTTCTTCGGATCCCCGATACTCTCGACTGGGGGAGCATCAT
TGAGAGATATCTCGGATCCAAGTATGCGACCATATGTGCTGTATTCCTGG
GCAGATTTTGCATTCGCAGGGCCTTCAATAGGCAACATAATTGCGGGATA
CGGCGTGCCCCAACTGGGCTGGCGGTGGAGCCTGTGGGAAATTCTGATTT
GCACTAGCCCTGCTTTGATCTTACACTTATTTCTTCCGGAGACATCTGAG
GAGAACATTCTCCTTCGCCGCGCTCAGCGAATTCGCCAGGCAACCGGCCT
TGGTTATTACCGGGCCAAATCCGAGCTCAACGCTGAAAGGTCTACATGGA
AGGATCGTTTCTGGGGTTTTCTCGTCATGCCCTGGAAAATCAACGTGCTA
GACCCTTCTGTCATGTTCACTAGCATATACACTGGGTTCATCTATGCCAT
TTTCAATTCCATGTTTGAGTTCTTTGATATTATATAGATGCTGTCCGCTT
TTTCCGACACCGCTGTAGGCACCATGGGCAGACTGTTGCTCCGGAGTCCC
TCTCTCAGATATCCTGAGGACGAAGAGGGTTTCCAACTGCTTCAATTTGC
TCGTGCATGGTCTGTAATAGAAGTTCCGAACTCTAGTGCCATATGGCTAG
ATGAGGAAAGTGGAATGCAGAGACGAGACGAGCTGGTCAATCCCTCTTTT
CCGACGACGGCCTTGGAGACTCAAGAGGCAGTTCCCTCTACTCCCACTGT
ACCTAGATATAGGGACAAGATAATAATTGTTGACTGGTACGGGGATGACG
ATCCTTCCAACCCCTTGAATTGGTCCTTTCAAAAGAAGGCGGTCGTATTC
GTCATTATCAACTTCAGTGCCTGCGTCGTCTACATGTGCGCAGCAATTTA
TACGCCATCCCAACCAGAAATTGAACGCACTTTTAATATCTCAGCGACCA
TCTCCAGCTTGGGACTTGCTCTTTTCCTTCTAGGATACGGTAGCGGCTCG
CTGCTCTTTGCGCCAATCTCCGAGATTCCCTCGATTGGTCGAAACTGGCC
CTATCTAATTTCCTTATTCATCTTCGTCGTGCTCGCAATCCCAACGGCAT
TATCGGAGACATTTGAGGGGTTGATGATTTTACGTTTCATTCAAGGCTTC
TTCGGATCCCCGATACTCTCGACTGGGGGAGCATCATTGAGAGATATCTC
GGATCCAAGTATGCGACCATATGTGCTGTATTCCTGGGCAGATTTTGCAT
TCGCAGGGCCTTCAATAGGCAACATAATTGCGGGATACGGCGTGCCCCAA
CTGGGCTGGCGGTGGAGCCTGTGGGAAATTCTGATTTGCACTAGCCCTGC
TTTGATCTTACACTTATTTCTTCCGGAGACATCTGAGGAGAACATTCTCC
TTCGCCGCGCTCAGCGAATTCGCCAGGCAACCGGCCTTGGTTATTACCGG
GCCAAATCCGAGCTCAACGCTGAAAGGTCTACATGGAAGGATCGTTTCTG
GGGTTTTCTCGTCATGCCCTGGAAAATCAACGTGCTAGACCCTTCTGTCA
TGTTCACTAGCATATACACTGGGTTCATCTATGCCATTTTCAATTCCATG
TTTGAGTTCTTTGATATTATATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001620KJC3_001620Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001620-T1.exon1KJC3_001620-T1.exon1Aspergillus niger KJC3exon
KJC3_001620-T1.exon2KJC3_001620-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001620-T1.cdsKJC3_001620-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001620-T1KJC3_001620-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:219135..220328 +
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