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KJC3_001624-T1, KJC3_001624-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001624-T1
Unique NameKJC3_001624-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:230981..232795-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001624-T1 ID=KJC3_001624-T1|Name=KJC3_001624-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1815bp|location=Sequence derived from alignment at ch2:230981..232795- (Aspergillus niger KJC3)
CGCAGGTCGAGATTCAGACTCTGGTGAGGTGTATGAAATCATGGCTTCCC
GCTACAGCCAGTCACTCAAGGATTTTTGTTGACAATATGACGCGAGATAC
GATCGTTTTAAAGGCCACTGATCCTTGTATAAAACCCTCCTTGAGAACTC
GAACGGGGTGTTTAACGTGCAGGCGGCGGAAAAAGAGATGCGACGAGCGC
CGCCCATCCTGCACTGGCTGCCAACGTAACCGCCTTGAATGCCAGTGGGA
GTCTGCTGGCTCGCTCATATGGCCCAAACGCCGGCGAGCAAGGGGGACTG
GCGCCGAGAAACTACTACCTGACCAGGCACAAAGAATGGTGAACGTGTTC
TCAGTCCTAACTCCCGACATAGTCTCCCGCTTGCTCCGTCACTTCCTCAA
CGCTAGCCCAAGATGGTTATCAACTAGAACTGGACCTCGACGGACTGACT
ACATGAAATGGCTCTCTCCTGCTCTATCAAAGAGCCATGTTGTGCGCAGT
TGCGTCCTGGCAATAGCTGCGGCGGATTTACTCAAATACTATGGTAACCA
CCCACAACTACAGCATGCCGCATTTGAATACTACGGACAAGCTGTCTCGA
GCCTTAGAAGAGCAATTGAAAGCGAATTGTCATTTGATTCGTCGTCTGAC
GCTTTTTCTTCTGGTACAAACCCTCCCTACACTTCCATTTCGGCCTTTCC
GCTAATATGAATATAGACTACACCCCGCTATCCGTCCTTTTGCTATGTCT
ACATGAGGTATACCAATTTCAATACAAGTTGTCATTCCAGCAAGTAGACT
GACAGACTTAGACTCAGAATTTTACCAGCCGCGAGAGAATCCTTCCACAT
CTCAATGCAGCGGCTTTTCTCCTGCAGAATCGCATTCGCTGCGACAGCAT
AGACACCGACTTGAGAGGATATCTATTCGAAATGTTTTGCTATTTTTTCG
CCTTAGCACGTTTCTCCCTTGGCTCTGAGCTCTTGATCGCACAAGCAGAT
CGCATCTTTGCCTCCCCGTCAATCATCCAACATATTCAGCACGGCCATAT
CATGGGAACCTCCCAGTCTTTATTCATCGCCATATACCGCATATGCCATT
TTTCTCATGATATGCAATCTAGCATATCTGCCGATAGATCTTCCGCACGA
CAAGGGCTTTTACTGCTTGACCAAGAACTTACAGCCTGTCAAAGCCAGCT
CACCATCGATCCTAGTATGGATCAGGGGCATCTCAATGATGTCATTACAT
CGAACCTGTACAGTTTGGCATGTCGCATTCACATCAAAGCACTTCTTACA
CACGAATCTGATGAAACCGACACGGTTCACTCCCTGATGGAGGAGTTCAT
AAACAACTTACAGCATCTTCCTCCCCACTCACCATCGCACAACATTCTGT
GCTGGCCGCTGGTTATTGCGGGTCTTTCGGCGAAAACTTCTGCATATCAA
CGTATTATCGTTGCAAAGCTGAACAATATACACGAAGAATGGAAATCTGC
CGTTTTCTCGAAAAGTGCCGATTTCCTGCGTGAACTGTGGCGAAGGGATA
GGGTAATGCGACGCAGACTGGCCATTGCCAGTGGCTATGAGTATTCATCT
ACATTGAATGGGTACGTAGGCCATCGATGTCCGGTTATATTGGCTTGATC
TCTTGGGGCCAATTGGATAGTCTTGTGGCGCTGTATATTACATTCTTTTC
ACGTGTATATATCTTTGTGGAGAGACATGTATAGTTGTGGACATAGCGGG
ACGCCGATGTCGAGATTTGATTGTATAAATTTGTATACATTTTGGAAGGT
CCGGCGTACCAGGAC
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Coding sequence (CDS) from alignment at ch2:230981..232795-

>KJC3_001624-T1 ID=KJC3_001624-T1|Name=KJC3_001624-T1|organism=Aspergillus niger KJC3|type=CDS|length=4527bp|location=Sequence derived from alignment at ch2:230981..232795- (Aspergillus niger KJC3)
ACTCAGAATTTTACCAGCCGCGAGAGAATCCTTCCACATCTCAATGCAGC
GGCTTTTCTCCTGCAGAATCGCATTCGCTGCGACAGCATAGACACCGACT
TGAGAGGATATCTATTCGAAATGTTTTGCTATTTTTTCGCCTTAGCACGT
TTCTCCCTTGGCTCTGAGCTCTTGATCGCACAAGCAGATCGCATCTTTGC
CTCCCCGTCAATCATCCAACATATTCAGCACGGCCATATCATGGGAACCT
CCCAGTCTTTATTCATCGCCATATACCGCATATGCCATTTTTCTCATGAT
ATGCAATCTAGCATATCTGCCGATAGATCTTCCGCACGACAAGGGCTTTT
ACTGCTTGACCAAGAACTTACAGCCTGTCAAAGCCAGCTCACCATCGATC
CTAGTATGGATCAGGGGCATCTCAATGATGTCATTACATCGAACCTGTAC
AGTTTGGCATGTCGCATTCACATCAAAGCACTTCTTACACACGAATCTGA
TGAAACCGACACGGTTCACTCCCTGATGGAGGAGTTCATAAACAACTTAC
AGCATCTTCCTCCCCACTCACCATCGCACAACATTCTGTGCTGGCCGCTG
GTTATTGCGGGTCTTTCGGCGAAAACTTCTGCATATCAACGTATTATCGT
TGCAAAGCTGAACAATATACACGAAGAATGGAAATCTGCCGTTTTCTCGA
AAAGTGCCGATTTCCTGCGTGAACTGTGGCGAAGGGATAGGGTAATGCGA
CGCAGACTGGCCATTGCCAGTGGCTATGAGTATTCATCTACATTGAATGG
GTACGTAGGCCATCGATGTCCGGTTATATTGGCTTGAACTACACCCCGCT
ATCCGTCCTTTTGCTATGTCTACATGAGATGAAATCATGGCTTCCCGCTA
CAGCCAGTCACTCAAGGATTTTTGTTGACAATATGACGCGAGATACGATC
GTTTTAAAGGCCACTGATCCTTGTATAAAACCCTCCTTGAGAACTCGAAC
GGGGTGTTTAACGTGCAGGCGGCGGAAAAAGAGATGCGACGAGCGCCGCC
CATCCTGCACTGGCTGCCAACGTAACCGCCTTGAATGCCAGTGGGAGTCT
GCTGGCTCGCTCATATGGCCCAAACGCCGGCGAGCAAGGGGGACTGGCGC
CGAGAAACTACTACCTGACCAGGCACAAAGAATGGTGAACGTGTTCTCAG
TCCTAACTCCCGACATAGTCTCCCGCTTGCTCCGTCACTTCCTCAACGCT
AGCCCAAGATGGTTATCAACTAGAACTGGACCTCGACGGACTGACTACAT
GAAATGGCTCTCTCCTGCTCTATCAAAGAGCCATGTTGTGCGCAGTTGCG
TCCTGGCAATAGCTGCGGCGGATTTACTCAAATACTATGGTAACCACCCA
CAACTACAGCATGCCGCATTTGAATACTACGGACAAGCTGTCTCGAGCCT
TAGAAGAGCAATTGAAAGCGAATTGTCATTTGATTCGTCGTCTGACGCTT
TTTCTTCTGACTCAGAATTTTACCAGCCGCGAGAGAATCCTTCCACATCT
CAATGCAGCGGCTTTTCTCCTGCAGAATCGCATTCGCTGCGACAGCATAG
ACACCGACTTGAGAGGATATCTATTCGAAATGTTTTGCTATTTTTTCGCC
TTAGCACGTTTCTCCCTTGGCTCTGAGCTCTTGATCGCACAAGCAGATCG
CATCTTTGCCTCCCCGTCAATCATCCAACATATTCAGCACGGCCATATCA
TGGGAACCTCCCAGTCTTTATTCATCGCCATATACCGCATATGCCATTTT
TCTCATGATATGCAATCTAGCATATCTGCCGATAGATCTTCCGCACGACA
AGGGCTTTTACTGCTTGACCAAGAACTTACAGCCTGTCAAAGCCAGCTCA
CCATCGATCCTAGTATGGATCAGGGGCATCTCAATGATGTCATTACATCG
AACCTGTACAGTTTGGCATGTCGCATTCACATCAAAGCACTTCTTACACA
CGAATCTGATGAAACCGACACGGTTCACTCCCTGATGGAGGAGTTCATAA
ACAACTTACAGCATCTTCCTCCCCACTCACCATCGCACAACATTCTGTGC
TGGCCGCTGGTTATTGCGGGTCTTTCGGCGAAAACTTCTGCATATCAACG
TATTATCGTTGCAAAGCTGAACAATATACACGAAGAATGGAAATCTGCCG
TTTTCTCGAAAAGTGCCGATTTCCTGCGTGAACTGTGGCGAAGGGATAGG
GTAATGCGACGCAGACTGGCCATTGCCAGTGGCTATGAGTATTCATCTAC
ATTGAATGGGTACGTAGGCCATCGATGTCCGGTTATATTGGCTTGAACTA
CACCCCGCTATCCGTCCTTTTGCTATGTCTACATGAGATGAAATCATGGC
TTCCCGCTACAGCCAGTCACTCAAGGATTTTTGTTGACAATATGACGCGA
GATACGATCGTTTTAAAGGCCACTGATCCTTGTATAAAACCCTCCTTGAG
AACTCGAACGGGGTGTTTAACGTGCAGGCGGCGGAAAAAGAGATGCGACG
AGCGCCGCCCATCCTGCACTGGCTGCCAACGTAACCGCCTTGAATGCCAG
TGGGAGTCTGCTGGCTCGCTCATATGGCCCAAACGCCGGCGAGCAAGGGG
GACTGGCGCCGAGAAACTACTACCTGACCAGGCACAAAGAATGGTGAACG
TGTTCTCAGTCCTAACTCCCGACATAGTCTCCCGCTTGCTCCGTCACTTC
CTCAACGCTAGCCCAAGATGGTTATCAACTAGAACTGGACCTCGACGGAC
TGACTACATGAAATGGCTCTCTCCTGCTCTATCAAAGAGCCATGTTGTGC
GCAGTTGCGTCCTGGCAATAGCTGCGGCGGATTTACTCAAATACTATGGT
AACCACCCACAACTACAGCATGCCGCATTTGAATACTACGGACAAGCTGT
CTCGAGCCTTAGAAGAGCAATTGAAAGCGAATTGTCATTTGATTCGTCGT
CTGACGCTTTTTCTTCTGACTCAGAATTTTACCAGCCGCGAGAGAATCCT
TCCACATCTCAATGCAGCGGCTTTTCTCCTGCAGAATCGCATTCGCTGCG
ACAGCATAGACACCGACTTGAGAGGATATCTATTCGAAATGTTTTGCTAT
TTTTTCGCCTTAGCACGTTTCTCCCTTGGCTCTGAGCTCTTGATCGCACA
AGCAGATCGCATCTTTGCCTCCCCGTCAATCATCCAACATATTCAGCACG
GCCATATCATGGGAACCTCCCAGTCTTTATTCATCGCCATATACCGCATA
TGCCATTTTTCTCATGATATGCAATCTAGCATATCTGCCGATAGATCTTC
CGCACGACAAGGGCTTTTACTGCTTGACCAAGAACTTACAGCCTGTCAAA
GCCAGCTCACCATCGATCCTAGTATGGATCAGGGGCATCTCAATGATGTC
ATTACATCGAACCTGTACAGTTTGGCATGTCGCATTCACATCAAAGCACT
TCTTACACACGAATCTGATGAAACCGACACGGTTCACTCCCTGATGGAGG
AGTTCATAAACAACTTACAGCATCTTCCTCCCCACTCACCATCGCACAAC
ATTCTGTGCTGGCCGCTGGTTATTGCGGGTCTTTCGGCGAAAACTTCTGC
ATATCAACGTATTATCGTTGCAAAGCTGAACAATATACACGAAGAATGGA
AATCTGCCGTTTTCTCGAAAAGTGCCGATTTCCTGCGTGAACTGTGGCGA
AGGGATAGGGTAATGCGACGCAGACTGGCCATTGCCAGTGGCTATGAGTA
TTCATCTACATTGAATGGGTACGTAGGCCATCGATGTCCGGTTATATTGG
CTTGAACTACACCCCGCTATCCGTCCTTTTGCTATGTCTACATGAGATGA
AATCATGGCTTCCCGCTACAGCCAGTCACTCAAGGATTTTTGTTGACAAT
ATGACGCGAGATACGATCGTTTTAAAGGCCACTGATCCTTGTATAAAACC
CTCCTTGAGAACTCGAACGGGGTGTTTAACGTGCAGGCGGCGGAAAAAGA
GATGCGACGAGCGCCGCCCATCCTGCACTGGCTGCCAACGTAACCGCCTT
GAATGCCAGTGGGAGTCTGCTGGCTCGCTCATATGGCCCAAACGCCGGCG
AGCAAGGGGGACTGGCGCCGAGAAACTACTACCTGACCAGGCACAAAGAA
TGGTGAACGTGTTCTCAGTCCTAACTCCCGACATAGTCTCCCGCTTGCTC
CGTCACTTCCTCAACGCTAGCCCAAGATGGTTATCAACTAGAACTGGACC
TCGACGGACTGACTACATGAAATGGCTCTCTCCTGCTCTATCAAAGAGCC
ATGTTGTGCGCAGTTGCGTCCTGGCAATAGCTGCGGCGGATTTACTCAAA
TACTATGGTAACCACCCACAACTACAGCATGCCGCATTTGAATACTACGG
ACAAGCTGTCTCGAGCCTTAGAAGAGCAATTGAAAGCGAATTGTCATTTG
ATTCGTCGTCTGACGCTTTTTCTTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001624KJC3_001624Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001624-T1KJC3_001624-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001624-T1.cdsKJC3_001624-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001624-T1.utr3p1KJC3_001624-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001624-T1.exon3KJC3_001624-T1.exon3Aspergillus niger KJC3exon
KJC3_001624-T1.exon2KJC3_001624-T1.exon2Aspergillus niger KJC3exon
KJC3_001624-T1.exon1KJC3_001624-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001624-T1.utr5p1KJC3_001624-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:230981..232795 -
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