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KJC3_001628-T1, KJC3_001628-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001628-T1
Unique NameKJC3_001628-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:240334..242388-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001628-T1 ID=KJC3_001628-T1|Name=KJC3_001628-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2055bp|location=Sequence derived from alignment at ch2:240334..242388- (Aspergillus niger KJC3)
ATGTGTCACAAGTCCAATTACTCATCCCCGAAATGGTGGAAAGAATCGGT
TGTGTATCAAGTGTATCCTGCAAGCTTCAACTGCGGTAAATCTACGACAA
CTACCAATGGATGGGGTGATGTGACTGGTATTATTGAGAAGGTTCCTTAT
TTGAAGAGCTTGGGTGTAGACATTGTATGGCTTAGTCCAAGTGAGTGAAA
ATCTGTAATTCGTGTTATAGTCGCAGACGTCTAGAGAACAATGCCTGACA
TCTCTTCCCCTAGTCTATACGTCCCCACAAGTCGACATGGGCTACGATAT
CGCGGATTATAAATCCATCGATCCGCGGTATGGCACCTTAGCAGACGTTG
ACCTTTTGATAAAATCCTTGAAGGACCATGACATGAGACTCATGATGGAC
CTGGTGGTTAATCATACATCTGATCAACACTCTTGGTTTGTCGAGTCAGC
TAGCTCCAAAGATTCTCCAAAACGTGATTGGTATATCTGGAGGCCGGCCA
AGGGATTCGACGAGGCCGGGAATCCAGTTCCTCCAAACAATTGGGCACAG
ATCCTGGGCGATACACTCAGCGCTTGGACTTGGCATGAGGAGACTCAGGA
GTTCTATTTGACTTTGCACACGTCAGCGCAAGCAGAGCTCAACTGGGAGA
ATCCAGACGTTGTCACCGCTGTTTATGATGTGAGTTTCGCTGGTCACCAA
GGGACCCTTCATCCTCGTAACCCGCGACTCTGAGACGTCTGAATGAGTGG
TGTTACTGATCAATCATCAATCTTGGTTTTAGGTAATGGAGTTTTGGCTG
CGTCGTGGGATCTGTGGTTTTCGCATGGACGTCATTAATTTCATTTCCAA
GGACCAGTCTTTCCCAGACGCCCCGATCATCGATCCAGCCTCCAAATACC
AGCCCGGCGAGCAGTTCTACACAAATGGGCCACGATTCCACGAGTTTATG
CACGGAATCTACGATAATGTTTTATCCAAGTACGACACCATCACTGTTGG
GGAAACCCCCTACGTCACTGATATGAAGGAGATCATCAAGACGGTGGGCT
CCACGGCAAAAGAGCTTAACATGGCATTCAATTTTGATCACATGGAAATT
GAAGATATCAAAACCAAAGGGGAGTCCAAATGGAGCTTGCGCGACTGGAA
GTTGACCGAGTTGAAAGGCATTTTGTCCGGCTGGCAGAAACGAATGAGGG
AGTGGGACGGCTGGAACGCCATCTTCCTGGAATGTCACGATCAGGCGCGG
TCGGTCTCCCGGTACACCAACGATTCGGATGAGTTCAGAGACCGGGGAGC
CAAATTACTAGCCCTTCTGGAGACGACGCTAGGTGGGACCATTTTCCTTT
ATCAGGGTCAGGAGATCGGCATGCGCAACTTTCCTGTTGAGTGGGGTCCC
GACACCGAGTACAAGGACATTGAGTCGGTCAACTTCTGGAAGAAATCCAA
AGAGCTCCACCCTGTTGGCTCTGAAGGCCTGGCCCAGGCTCGGACGCTCT
TGCAGAAAAAGGCCAGGGACCACGCCCGCACCCCGATGCAATGGAGTGCT
GACCCACATGCGGGCTTCACAGTCCCTGATGCGACACCTTGGATGAGGGT
GAATGATGACTATCGGACAGTTAATGTGGAGGCACAGATGTCTTTCCCGT
GGGAAATGAAAGGTGAACTATCAGTGTGGCAGTACTGGCAGCAGGCATTG
CAACGCCGAAAGCTACATAAGGGTGCTTTTGTTTATGGCGACTTTGAGGA
CCTGGACTATCACAACGAATCGGTCTTCGCGTATTCGAGGACTAGTGCAG
ATGGAAAGGAGACCTGGCTTGTTGCGATGAACTGGACAACGGATGCAGTC
GAATGGACGGTTCCTTCAGGCATCCACGTCACACGCTGGGTCTCCTCGAC
GCTCCAGACTGCCCCGCCTATGGCGGGCCAGTCGACTGTCACGCTCCGAG
CCCTGGAAGGTGTCGTTGGGTGTTGTAGTTAGCAGGTTGCGTGGTATCAC
TACTAGTACTGGTTACGTTGCGTCGATTGATATTAGTGGTCCAATTACTT
TAGCC
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Coding sequence (CDS) from alignment at ch2:240334..242388-

>KJC3_001628-T1 ID=KJC3_001628-T1|Name=KJC3_001628-T1|organism=Aspergillus niger KJC3|type=CDS|length=5418bp|location=Sequence derived from alignment at ch2:240334..242388- (Aspergillus niger KJC3)
GTAATGGAGTTTTGGCTGCGTCGTGGGATCTGTGGTTTTCGCATGGACGT
CATTAATTTCATTTCCAAGGACCAGTCTTTCCCAGACGCCCCGATCATCG
ATCCAGCCTCCAAATACCAGCCCGGCGAGCAGTTCTACACAAATGGGCCA
CGATTCCACGAGTTTATGCACGGAATCTACGATAATGTTTTATCCAAGTA
CGACACCATCACTGTTGGGGAAACCCCCTACGTCACTGATATGAAGGAGA
TCATCAAGACGGTGGGCTCCACGGCAAAAGAGCTTAACATGGCATTCAAT
TTTGATCACATGGAAATTGAAGATATCAAAACCAAAGGGGAGTCCAAATG
GAGCTTGCGCGACTGGAAGTTGACCGAGTTGAAAGGCATTTTGTCCGGCT
GGCAGAAACGAATGAGGGAGTGGGACGGCTGGAACGCCATCTTCCTGGAA
TGTCACGATCAGGCGCGGTCGGTCTCCCGGTACACCAACGATTCGGATGA
GTTCAGAGACCGGGGAGCCAAATTACTAGCCCTTCTGGAGACGACGCTAG
GTGGGACCATTTTCCTTTATCAGGGTCAGGAGATCGGCATGCGCAACTTT
CCTGTTGAGTGGGGTCCCGACACCGAGTACAAGGACATTGAGTCGGTCAA
CTTCTGGAAGAAATCCAAAGAGCTCCACCCTGTTGGCTCTGAAGGCCTGG
CCCAGGCTCGGACGCTCTTGCAGAAAAAGGCCAGGGACCACGCCCGCACC
CCGATGCAATGGAGTGCTGACCCACATGCGGGCTTCACAGTCCCTGATGC
GACACCTTGGATGAGGGTGAATGATGACTATCGGACAGTTAATGTGGAGG
CACAGATGTCTTTCCCGTGGGAAATGAAAGGTGAACTATCAGTGTGGCAG
TACTGGCAGCAGGCATTGCAACGCCGAAAGCTACATAAGGGTGCTTTTGT
TTATGGCGACTTTGAGGACCTGGACTATCACAACGAATCGGTCTTCGCGT
ATTCGAGGACTAGTGCAGATGGAAAGGAGACCTGGCTTGTTGCGATGAAC
TGGACAACGGATGCAGTCGAATGGACGGTTCCTTCAGGCATCCACGTCAC
ACGCTGGGTCTCCTCGACGCTCCAGACTGCCCCGCCTATGGCGGGCCAGT
CGACTGTCACGCTCCGAGCCCTGGAAGGTGTCGTTGGGTGTTGTAGTTAG
TCTATACGTCCCCACAAGTCGACATGGGCTACGATATCGCGGATTATAAA
TCCATCGATCCGCGGTATGGCACCTTAGCAGACGTTGACCTTTTGATAAA
ATCCTTGAAGGACCATGACATGAGACTCATGATGGACCTGGTGGTTAATC
ATACATCTGATCAACACTCTTGGTTTGTCGAGTCAGCTAGCTCCAAAGAT
TCTCCAAAACGTGATTGGTATATCTGGAGGCCGGCCAAGGGATTCGACGA
GGCCGGGAATCCAGTTCCTCCAAACAATTGGGCACAGATCCTGGGCGATA
CACTCAGCGCTTGGACTTGGCATGAGGAGACTCAGGAGTTCTATTTGACT
TTGCACACGTCAGCGCAAGCAGAGCTCAACTGGGAGAATCCAGACGTTGT
CACCGCTGTTTATGATATGTGTCACAAGTCCAATTACTCATCCCCGAAAT
GGTGGAAAGAATCGGTTGTGTATCAAGTGTATCCTGCAAGCTTCAACTGC
GGTAAATCTACGACAACTACCAATGGATGGGGTGATGTGACTGGTATTAT
TGAGAAGGTTCCTTATTTGAAGAGCTTGGGTGTAGACATTGTATGGCTTA
GTCCAAGTAATGGAGTTTTGGCTGCGTCGTGGGATCTGTGGTTTTCGCAT
GGACGTCATTAATTTCATTTCCAAGGACCAGTCTTTCCCAGACGCCCCGA
TCATCGATCCAGCCTCCAAATACCAGCCCGGCGAGCAGTTCTACACAAAT
GGGCCACGATTCCACGAGTTTATGCACGGAATCTACGATAATGTTTTATC
CAAGTACGACACCATCACTGTTGGGGAAACCCCCTACGTCACTGATATGA
AGGAGATCATCAAGACGGTGGGCTCCACGGCAAAAGAGCTTAACATGGCA
TTCAATTTTGATCACATGGAAATTGAAGATATCAAAACCAAAGGGGAGTC
CAAATGGAGCTTGCGCGACTGGAAGTTGACCGAGTTGAAAGGCATTTTGT
CCGGCTGGCAGAAACGAATGAGGGAGTGGGACGGCTGGAACGCCATCTTC
CTGGAATGTCACGATCAGGCGCGGTCGGTCTCCCGGTACACCAACGATTC
GGATGAGTTCAGAGACCGGGGAGCCAAATTACTAGCCCTTCTGGAGACGA
CGCTAGGTGGGACCATTTTCCTTTATCAGGGTCAGGAGATCGGCATGCGC
AACTTTCCTGTTGAGTGGGGTCCCGACACCGAGTACAAGGACATTGAGTC
GGTCAACTTCTGGAAGAAATCCAAAGAGCTCCACCCTGTTGGCTCTGAAG
GCCTGGCCCAGGCTCGGACGCTCTTGCAGAAAAAGGCCAGGGACCACGCC
CGCACCCCGATGCAATGGAGTGCTGACCCACATGCGGGCTTCACAGTCCC
TGATGCGACACCTTGGATGAGGGTGAATGATGACTATCGGACAGTTAATG
TGGAGGCACAGATGTCTTTCCCGTGGGAAATGAAAGGTGAACTATCAGTG
TGGCAGTACTGGCAGCAGGCATTGCAACGCCGAAAGCTACATAAGGGTGC
TTTTGTTTATGGCGACTTTGAGGACCTGGACTATCACAACGAATCGGTCT
TCGCGTATTCGAGGACTAGTGCAGATGGAAAGGAGACCTGGCTTGTTGCG
ATGAACTGGACAACGGATGCAGTCGAATGGACGGTTCCTTCAGGCATCCA
CGTCACACGCTGGGTCTCCTCGACGCTCCAGACTGCCCCGCCTATGGCGG
GCCAGTCGACTGTCACGCTCCGAGCCCTGGAAGGTGTCGTTGGGTGTTGT
AGTTAGTCTATACGTCCCCACAAGTCGACATGGGCTACGATATCGCGGAT
TATAAATCCATCGATCCGCGGTATGGCACCTTAGCAGACGTTGACCTTTT
GATAAAATCCTTGAAGGACCATGACATGAGACTCATGATGGACCTGGTGG
TTAATCATACATCTGATCAACACTCTTGGTTTGTCGAGTCAGCTAGCTCC
AAAGATTCTCCAAAACGTGATTGGTATATCTGGAGGCCGGCCAAGGGATT
CGACGAGGCCGGGAATCCAGTTCCTCCAAACAATTGGGCACAGATCCTGG
GCGATACACTCAGCGCTTGGACTTGGCATGAGGAGACTCAGGAGTTCTAT
TTGACTTTGCACACGTCAGCGCAAGCAGAGCTCAACTGGGAGAATCCAGA
CGTTGTCACCGCTGTTTATGATATGTGTCACAAGTCCAATTACTCATCCC
CGAAATGGTGGAAAGAATCGGTTGTGTATCAAGTGTATCCTGCAAGCTTC
AACTGCGGTAAATCTACGACAACTACCAATGGATGGGGTGATGTGACTGG
TATTATTGAGAAGGTTCCTTATTTGAAGAGCTTGGGTGTAGACATTGTAT
GGCTTAGTCCAAGTAATGGAGTTTTGGCTGCGTCGTGGGATCTGTGGTTT
TCGCATGGACGTCATTAATTTCATTTCCAAGGACCAGTCTTTCCCAGACG
CCCCGATCATCGATCCAGCCTCCAAATACCAGCCCGGCGAGCAGTTCTAC
ACAAATGGGCCACGATTCCACGAGTTTATGCACGGAATCTACGATAATGT
TTTATCCAAGTACGACACCATCACTGTTGGGGAAACCCCCTACGTCACTG
ATATGAAGGAGATCATCAAGACGGTGGGCTCCACGGCAAAAGAGCTTAAC
ATGGCATTCAATTTTGATCACATGGAAATTGAAGATATCAAAACCAAAGG
GGAGTCCAAATGGAGCTTGCGCGACTGGAAGTTGACCGAGTTGAAAGGCA
TTTTGTCCGGCTGGCAGAAACGAATGAGGGAGTGGGACGGCTGGAACGCC
ATCTTCCTGGAATGTCACGATCAGGCGCGGTCGGTCTCCCGGTACACCAA
CGATTCGGATGAGTTCAGAGACCGGGGAGCCAAATTACTAGCCCTTCTGG
AGACGACGCTAGGTGGGACCATTTTCCTTTATCAGGGTCAGGAGATCGGC
ATGCGCAACTTTCCTGTTGAGTGGGGTCCCGACACCGAGTACAAGGACAT
TGAGTCGGTCAACTTCTGGAAGAAATCCAAAGAGCTCCACCCTGTTGGCT
CTGAAGGCCTGGCCCAGGCTCGGACGCTCTTGCAGAAAAAGGCCAGGGAC
CACGCCCGCACCCCGATGCAATGGAGTGCTGACCCACATGCGGGCTTCAC
AGTCCCTGATGCGACACCTTGGATGAGGGTGAATGATGACTATCGGACAG
TTAATGTGGAGGCACAGATGTCTTTCCCGTGGGAAATGAAAGGTGAACTA
TCAGTGTGGCAGTACTGGCAGCAGGCATTGCAACGCCGAAAGCTACATAA
GGGTGCTTTTGTTTATGGCGACTTTGAGGACCTGGACTATCACAACGAAT
CGGTCTTCGCGTATTCGAGGACTAGTGCAGATGGAAAGGAGACCTGGCTT
GTTGCGATGAACTGGACAACGGATGCAGTCGAATGGACGGTTCCTTCAGG
CATCCACGTCACACGCTGGGTCTCCTCGACGCTCCAGACTGCCCCGCCTA
TGGCGGGCCAGTCGACTGTCACGCTCCGAGCCCTGGAAGGTGTCGTTGGG
TGTTGTAGTTAGTCTATACGTCCCCACAAGTCGACATGGGCTACGATATC
GCGGATTATAAATCCATCGATCCGCGGTATGGCACCTTAGCAGACGTTGA
CCTTTTGATAAAATCCTTGAAGGACCATGACATGAGACTCATGATGGACC
TGGTGGTTAATCATACATCTGATCAACACTCTTGGTTTGTCGAGTCAGCT
AGCTCCAAAGATTCTCCAAAACGTGATTGGTATATCTGGAGGCCGGCCAA
GGGATTCGACGAGGCCGGGAATCCAGTTCCTCCAAACAATTGGGCACAGA
TCCTGGGCGATACACTCAGCGCTTGGACTTGGCATGAGGAGACTCAGGAG
TTCTATTTGACTTTGCACACGTCAGCGCAAGCAGAGCTCAACTGGGAGAA
TCCAGACGTTGTCACCGCTGTTTATGATATGTGTCACAAGTCCAATTACT
CATCCCCGAAATGGTGGAAAGAATCGGTTGTGTATCAAGTGTATCCTGCA
AGCTTCAACTGCGGTAAATCTACGACAACTACCAATGGATGGGGTGATGT
GACTGGTATTATTGAGAAGGTTCCTTATTTGAAGAGCTTGGGTGTAGACA
TTGTATGGCTTAGTCCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001628KJC3_001628Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001628-T1KJC3_001628-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001628-T1.cdsKJC3_001628-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001628-T1.utr3p1KJC3_001628-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001628-T1.exon3KJC3_001628-T1.exon3Aspergillus niger KJC3exon
KJC3_001628-T1.exon2KJC3_001628-T1.exon2Aspergillus niger KJC3exon
KJC3_001628-T1.exon1KJC3_001628-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteCAZy:GH13_1
NoteCAZy:GH13_2
NoteCAZy:GH13_20
NoteCAZy:GH13_4
NoteCAZy:GH13_35
NoteCAZy:GH13_16
NoteCAZy:GH13_30
NoteCAZy:GH13_36
NoteCAZy:GH13
NoteCAZy:GH13_17
NoteCAZy:GH13_23
NoteCAZy:GH13_29
NoteCAZy:GH13_31
NoteCAZy:GH13_40
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR032091
DBxrefInterPro:IPR006047
DBxrefPFAM:PF16657
DBxrefPFAM:PF00128
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:240334..242388 -
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