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KJC3_001630-T1, KJC3_001630-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001630-T1
Unique NameKJC3_001630-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:244613..247478+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001630-T1 ID=KJC3_001630-T1|Name=KJC3_001630-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2866bp|location=Sequence derived from alignment at ch2:244613..247478+ (Aspergillus niger KJC3)
CATGAAGACGACCAGAAAGAGCACCCCAAAGACCCGTACGGGATGTACTA
CCTGCAAGTAAGTAGACAGACTTTGCATCAGGCATGTGTCTAACCCATCA
GAACCCGTCGCATCAAATGCGACGAAACAAAACCGCATTGTCTGCGGTGC
ACGCGCTCAAATCGCACATGTGGGGGATACACATCGCTTGCGTCCGCCCT
TGTGGTGGATAAAATTAAAGAATATAGCATTCCGTTTAAAGTCCCTGGCG
GTAGATTTGATCGCCAGCTCCTCCATTTCTACTGTATCGAAGCCGCAGCG
AGTCTTTCAAGCTTTTCCGACGCGGACTTCTGGAATCGACTCATCTTGCA
GAGATGCCACCATCAGCCAGTGATTCGCAACGCACTTGTCACGCTCAGCG
CTATTTATCGAGACTATAAGTCCAAAGAGAACTCTGGGTTGGAGTCCGAC
CGTACATCGCCGCAGCATCTGCAACTAATCGCCAGATCTCACAAGCAGCT
AAGGATACATCTATGTTCACCCGGCGCGTCAACTGAAGTTGCTTTGATCT
GCAGCATGATCTTTTACGCTTTTGAGGCTCTTCTAGGCAATGCCGTACAG
GCGATCCGACATCTTGATCAGGGGCTGATCCTGCTGGAACGTTGTCAGGC
TACTGCGCCCGTGCACCGCGCCACGGATGACATTTTTCCGCGTTTAACAG
CCTTGTTCGCTAGCCTGGACATTCAGGCAAGCACATACACTAATAGCCGG
CAGCCTATATTGTCACTTACTTCGCCATTGGAAAGGTCTGGGCTTGTCCC
GGTCATCCCAGAAGGTTTCACCTCCGCAGATGCACAAATGTTACTCATCA
AGTTGCAGAACTGGATGTTCCACCATCTTGCCTCTTCCCACCCATATAAG
ATTAAAGGCCTGCACCTTCTACCAGCAGATATCCTTATCGAGCGACACCG
GCTATATGACCAATTGACGAAATATATAGAAACTGTGAGCGCGTGTTCGA
CCTATAATTCTCGCCCAAGCACGGCAAATTGTCTACTCCTTCGACTCCAA
GCTCGGATTTTCCGCACTATCCTGGCCGAGGATATTCCATCCCTGCAGGA
TAAAGATCGTGAGCCACTTCGAGAATGTTTACAGGATATATCGGTCATTT
TGGAAACTATGTCCACGGTCTCCCCTGCACAGAATATTACTTCTGCGCAG
AGATCATTCACATTAAGTACCCAGCTTGTCGCAGCGCTCTACTATATCTG
TATGAAAAGCAATCATCCCAGCACAGTGGAGGCTGCCCTGTCATTCCTGC
GACACGAAAAGCTGCCGAGCCGCGATGGGGTCTGGGACGCACGGACGGTA
GAAGCTGTGGTGCATGGCATCCGACATTCCAGCAAGCTGCCTGAATGGCG
AATAGGCAAAGATGAAGCTGCAGAATATCGCCTCGAGTACGCCAATGCGG
ATGTTGTCAACGCAGCTAGTGATGGGGGCGTGTATGAGATACGGGAAATA
CTGCGACGTAATGAGCAGTAGATCAGGTGTGGCGACTCCTCTAGCTTGGT
GTCTAGGTCTTAATGACCCCCACGAGAGCTGTTGAACACAGGTGAGCTGG
CCGCTCTTGGGTCCTCAGCTTCCGGGAGCGGTTCTAACCGGCTCGTGTCC
GATAGACGACTTCCATGGCGCGATAGCGGGATGATGTCAACACATCAAGG
CAATCCGGCTAATTCGCGTGCAGGGATCGGGTATTGGGTGGCCAGTCACA
CTTGTCGCCGTCGCGTCGCCTCACTTTTGAGTTACGCCATGGATAGATGA
CAGCCAGTCATGGCTGCCCTCTAAACCTAGATCGACACGGCTTTGTGGAT
GATGGCATGTTGTCCTCCCCGGCCTACAGTTAAAAGTGCAGTCCTCGGCA
TGTGCCATCCCCATCAAACGTGGGGGTGACTTTGCGGGGATCAATTGCGG
GGGATGGCCGCTACCCCATGTTTTAGTGTGGATTCGTTAGTCTCGAGCTT
GAAGCTTAAAAGGCATGCGGGTTGGCCGACCGGAAAGCGTGGGGGTGCCG
GGTTGACGGCGGGTTATTATGTCGAAGAGCTGCCCTTGTTTCATCCTACT
CCGAACACTTCTAACCAACAATCACAACATCTTCCTGACATGGAGCCTGA
CAAACCAGCCGCGATCCACGATGAGGGCACGGATGTGGCCAAGCCAACTA
CTATTGATGGTCTTCCGCATACGCCAGTCCTAGTGACAGAGGAAGATAGC
AAGCGGATCGCCCGCAAAACAGATCGAACCATTCTGGTGATATTGATCTG
GGTGTATTTCCTACAGATTCTCGACAAGTCAGTATTGGGCTTTGGCGCAA
CCTATGGCCTAGAGGAGGACACCCACCTCACCGGCAACCAATACTCCCTG
ATCGGTTCAATCGCCCCAATCGCACAGCTTGCATGGCAGCCCTTCTCCTC
CTGGCTTATTGTGACCATCCCGCCTCGCATCCTGATGCCCACATTAGTGC
TTGGATGGGGCATCGCGCAGACCTGCATGGCAGCATGCAGCAACTTCGGC
GGGCTAATGGCCACCCGCTTCTTTCTGGGCCTGTTCGAAGCCGGCTGCCT
ACCACTCTTCAGTCTCCTTACAAGCCAGTGGTATCGTCGTGCTGAGCAAC
CCATCCGAGTAGCCGCCTGGTACGGCACGAACGGCGTAGCGACCATCATA
GCAGCGGTGCTATCATTCGGCCTAGGACACATTAAATCCGGGGTAATGAA
AGAGTGGCAAATGTGAGCCCCCATCTTACCCAACGTACAATTATCCTGCA
AACTAACCTCAACAGCATCTTCCTCGTCGTCGGTCTCATCACCATCATCT
CCAGCCCATTCGTCTA
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Coding sequence (CDS) from alignment at ch2:244613..247478+

>KJC3_001630-T1 ID=KJC3_001630-T1|Name=KJC3_001630-T1|organism=Aspergillus niger KJC3|type=CDS|length=2952bp|location=Sequence derived from alignment at ch2:244613..247478+ (Aspergillus niger KJC3)
ATGAAGACGACCAGAAAGAGCACCCCAAAGACCCGTACGGGATGTACTAC
CTGCAAAACCCGTCGCATCAAATGCGACGAAACAAAACCGCATTGTCTGC
GGTGCACGCGCTCAAATCGCACATGTGGGGGATACACATCGCTTGCGTCC
GCCCTTGTGGTGGATAAAATTAAAGAATATAGCATTCCGTTTAAAGTCCC
TGGCGGTAGATTTGATCGCCAGCTCCTCCATTTCTACTGTATCGAAGCCG
CAGCGAGTCTTTCAAGCTTTTCCGACGCGGACTTCTGGAATCGACTCATC
TTGCAGAGATGCCACCATCAGCCAGTGATTCGCAACGCACTTGTCACGCT
CAGCGCTATTTATCGAGACTATAAGTCCAAAGAGAACTCTGGGTTGGAGT
CCGACCGTACATCGCCGCAGCATCTGCAACTAATCGCCAGATCTCACAAG
CAGCTAAGGATACATCTATGTTCACCCGGCGCGTCAACTGAAGTTGCTTT
GATCTGCAGCATGATCTTTTACGCTTTTGAGGCTCTTCTAGGCAATGCCG
TACAGGCGATCCGACATCTTGATCAGGGGCTGATCCTGCTGGAACGTTGT
CAGGCTACTGCGCCCGTGCACCGCGCCACGGATGACATTTTTCCGCGTTT
AACAGCCTTGTTCGCTAGCCTGGACATTCAGGCAAGCACATACACTAATA
GCCGGCAGCCTATATTGTCACTTACTTCGCCATTGGAAAGGTCTGGGCTT
GTCCCGGTCATCCCAGAAGGTTTCACCTCCGCAGATGCACAAATGTTACT
CATCAAGTTGCAGAACTGGATGTTCCACCATCTTGCCTCTTCCCACCCAT
ATAAGATTAAAGGCCTGCACCTTCTACCAGCAGATATCCTTATCGAGCGA
CACCGGCTATATGACCAATTGACGAAATATATAGAAACTGTGAGCGCGTG
TTCGACCTATAATTCTCGCCCAAGCACGGCAAATTGTCTACTCCTTCGAC
TCCAAGCTCGGATTTTCCGCACTATCCTGGCCGAGGATATTCCATCCCTG
CAGGATAAAGATCGTGAGCCACTTCGAGAATGTTTACAGGATATATCGGT
CATTTTGGAAACTATGTCCACGGTCTCCCCTGCACAGAATATTACTTCTG
CGCAGAGATCATTCACATTAAGTACCCAGCTTGTCGCAGCGCTCTACTAT
ATCTGTATGAAAAGCAATCATCCCAGCACAGTGGAGGCTGCCCTGTCATT
CCTGCGACACGAAAAGCTGCCGAGCCGCGATGGGGTCTGGGACGCACGGA
CGGTAGAAGCTGTGGTGCATGGCATCCGACATTCCAGCAAGCTGCCTGAA
TGGCGAATAGGCAAAGATGAAGCTGCAGAATATCGCCTCGAGTACGCCAA
TGCGGATGTTGTCAACGCAGCTAGTGATGGGGGCGTGTATGAGATACGGG
AAATACTGCGACGTAATGAGCAGTAGATGAAGACGACCAGAAAGAGCACC
CCAAAGACCCGTACGGGATGTACTACCTGCAAAACCCGTCGCATCAAATG
CGACGAAACAAAACCGCATTGTCTGCGGTGCACGCGCTCAAATCGCACAT
GTGGGGGATACACATCGCTTGCGTCCGCCCTTGTGGTGGATAAAATTAAA
GAATATAGCATTCCGTTTAAAGTCCCTGGCGGTAGATTTGATCGCCAGCT
CCTCCATTTCTACTGTATCGAAGCCGCAGCGAGTCTTTCAAGCTTTTCCG
ACGCGGACTTCTGGAATCGACTCATCTTGCAGAGATGCCACCATCAGCCA
GTGATTCGCAACGCACTTGTCACGCTCAGCGCTATTTATCGAGACTATAA
GTCCAAAGAGAACTCTGGGTTGGAGTCCGACCGTACATCGCCGCAGCATC
TGCAACTAATCGCCAGATCTCACAAGCAGCTAAGGATACATCTATGTTCA
CCCGGCGCGTCAACTGAAGTTGCTTTGATCTGCAGCATGATCTTTTACGC
TTTTGAGGCTCTTCTAGGCAATGCCGTACAGGCGATCCGACATCTTGATC
AGGGGCTGATCCTGCTGGAACGTTGTCAGGCTACTGCGCCCGTGCACCGC
GCCACGGATGACATTTTTCCGCGTTTAACAGCCTTGTTCGCTAGCCTGGA
CATTCAGGCAAGCACATACACTAATAGCCGGCAGCCTATATTGTCACTTA
CTTCGCCATTGGAAAGGTCTGGGCTTGTCCCGGTCATCCCAGAAGGTTTC
ACCTCCGCAGATGCACAAATGTTACTCATCAAGTTGCAGAACTGGATGTT
CCACCATCTTGCCTCTTCCCACCCATATAAGATTAAAGGCCTGCACCTTC
TACCAGCAGATATCCTTATCGAGCGACACCGGCTATATGACCAATTGACG
AAATATATAGAAACTGTGAGCGCGTGTTCGACCTATAATTCTCGCCCAAG
CACGGCAAATTGTCTACTCCTTCGACTCCAAGCTCGGATTTTCCGCACTA
TCCTGGCCGAGGATATTCCATCCCTGCAGGATAAAGATCGTGAGCCACTT
CGAGAATGTTTACAGGATATATCGGTCATTTTGGAAACTATGTCCACGGT
CTCCCCTGCACAGAATATTACTTCTGCGCAGAGATCATTCACATTAAGTA
CCCAGCTTGTCGCAGCGCTCTACTATATCTGTATGAAAAGCAATCATCCC
AGCACAGTGGAGGCTGCCCTGTCATTCCTGCGACACGAAAAGCTGCCGAG
CCGCGATGGGGTCTGGGACGCACGGACGGTAGAAGCTGTGGTGCATGGCA
TCCGACATTCCAGCAAGCTGCCTGAATGGCGAATAGGCAAAGATGAAGCT
GCAGAATATCGCCTCGAGTACGCCAATGCGGATGTTGTCAACGCAGCTAG
TGATGGGGGCGTGTATGAGATACGGGAAATACTGCGACGTAATGAGCAGT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001630KJC3_001630Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001630-T1KJC3_001630-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001630-T1.utr5p1KJC3_001630-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001630-T1.exon1KJC3_001630-T1.exon1Aspergillus niger KJC3exon
KJC3_001630-T1.exon2KJC3_001630-T1.exon2Aspergillus niger KJC3exon
KJC3_001630-T1.exon3KJC3_001630-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001630-T1.cdsKJC3_001630-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001630-T1.utr3p1KJC3_001630-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_001630-T1.utr3p2KJC3_001630-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:244613..247478 +
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