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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:258580..259723+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001636-T1 ID=KJC3_001636-T1|Name=KJC3_001636-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1144bp|location=Sequence derived from alignment at ch2:258580..259723+ (Aspergillus niger KJC3)
TCGAAGACAGATGTTGTATGCATGGGAAACTGAAAGCTGAGCTGCAAGGC
TGTGGGCAACAATGGTATAATTGGACGCGCCTAATGTTAGCTGTTCCATG
GGCGTCCACGGAGTGTGCCTTGCCTGCGCCAAGTGCTCGCTGCCCATAAT
ATAAAGCAGTGAATGGACATCATCATTTCATCATCGTTCCGAACTTCTGG
CTTTCTCCCAAGCCAATTCATCCACCTCTACAGGTCGCACATCCACCATT
ACCTCCATATTATTCATAATCCACCAACAGTGACCAATAGCTCCTCACCA
TCATTTACTTCTGCACGGACAATGTCCATCATCAAGTCGATCCTGGAATG
CCTCTGGGGACCATCACCCGACGTCTACCAGACCGATGCGCGCACTTCCG
CCGTTGCGTCAGACATTGTCAATATCCTCCTGACCGGTGAAACCCCCGAG
GCCATTCAGAAAGGACTGAAAGAACAAGTCGATGCCAACGGGTGGAGCGA
TTCCATCGCCCAAGCTATCCTCCATGGCCTCAACGACGCTATCACAGCCG
GAGCGGAAATGGCTGGCCCTGCTGCCGATGCTCTGAACAAAGCCAAAGAA
GCTGCAGTGGATTTTGCCAAAGAGCACCCAGCTTTTACGATCCTTCTTGC
TTTGGGGGTGCTGGCGGCATTAGCACCGTGGGTGCTCGAAGTCTTGGGAT
TCGGGGAGTTGGGACCAATTGCTGGGTCTTTCGCAGCGAGATGGCAAGCA
GCATATGCTGGCTATGTGCCTCGAGGTGCACTATTTACGTAGTTCCAACG
GTTGGGGATGAAGTGGCATTGGGTGGGTTAAGGATCTATTCGCTAAGCGT
GGTCGTGCTGATCAAGGACTGTCGGTGGCACAAATGATAAGTATGATGGC
ATTATGGGGTTTGGGGACAGGAAGAGTCAAGTCCAAACTGTAGCTAGTGT
CAATGGAGGCGAAGTGTATTGCAAATCATGAGGCATTTCAGATGTCGCGC
CACGTATCAGAGTTGCTCTGATTATCGCAGCAGACCGCTAGATGGGAACC
AAGGCATCTGCCGATGCTTTGATACAGACTTCACCAGCGGGCGGAATTAT
CTTCCAGACAAGCCAGCATGAAGAGGGGATAGTGTTCACAGAGG back to topCoding sequence (CDS) from alignment at ch2:258580..259723+ >KJC3_001636-T1 ID=KJC3_001636-T1|Name=KJC3_001636-T1|organism=Aspergillus niger KJC3|type=CDS|length=630bp|location=Sequence derived from alignment at ch2:258580..259723+ (Aspergillus niger KJC3)
ATGGACATCATCATTTCATCATCGTTCCGAACTTCTGGCTTTCTCCCAAG
CCAATTCATCCACCTCTACAGGTCGCACATCCACCATTACCTCCATATTA
TTCATAATCCACCAACAGTGACCAATAGCTCCTCACCATCATTTACTTCT
GCACGGACAATGTCCATCATCAAGTCGATCCTGGAATGCCTCTGGGGACC
ATCACCCGACGTCTACCAGACCGATGCGCGCACTTCCGCCGTTGCGTCAG
ACATTGTCAATATCCTCCTGACCGGTGAAACCCCCGAGGCCATTCAGAAA
GGACTGAAAGAACAAGTCGATGCCAACGGGTGGAGCGATTCCATCGCCCA
AGCTATCCTCCATGGCCTCAACGACGCTATCACAGCCGGAGCGGAAATGG
CTGGCCCTGCTGCCGATGCTCTGAACAAAGCCAAAGAAGCTGCAGTGGAT
TTTGCCAAAGAGCACCCAGCTTTTACGATCCTTCTTGCTTTGGGGGTGCT
GGCGGCATTAGCACCGTGGGTGCTCGAAGTCTTGGGATTCGGGGAGTTGG
GACCAATTGCTGGGTCTTTCGCAGCGAGATGGCAAGCAGCATATGCTGGC
TATGTGCCTCGAGGTGCACTATTTACGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001636-T1.utr5p1 | KJC3_001636-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001636-T1.utr3p1 | KJC3_001636-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:258580..259723 + |
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