You are here

Home

KJC3_001637-T1, KJC3_001637-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001637-T1
Unique NameKJC3_001637-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:260529..262322+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001637-T1 ID=KJC3_001637-T1|Name=KJC3_001637-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1794bp|location=Sequence derived from alignment at ch2:260529..262322+ (Aspergillus niger KJC3)
ATGGCTAAGATCCCTCACTGGCGTCTGATTGTCGACCAGAGTGTCGTCAC
TCAGGAGATCATCGACTATCCCTATGCCGGCTCAGGGACCGAATCCGATC
CATTCATCGTAGAATGGATTCCCAATGACCCGCGTAACCCCATGCATTTT
AACAAGAACATGAAATGGGTCTACACCATCATTGCCGCGTTCGCGACCTT
TGGCGTTTCCATGGCCTCGTCGGCCTATGCGGGCAGTATCGACCAAGTGA
TTGAGCACTTTAACATCGGCACGGAGGTAGCCACCCTGGGTGTTTCACTG
TTCGTGCTTGGATTTGCTATTGGACCCCTCGTCTGGGCACCGCTGAGTGA
ACTCATTGGACGCCAACTCGTTTTCTTCGTCTCCTACATGGGCCTGGCTG
TATTCAGTGCTGGTGCAACAGGCTCGAAAAACCCATGGACAATCATCATT
CTACGCTTCTTTGCTGGCTCATTCGGATCCAGTCCTTTAACCAACGCCGG
TGGACTAATTGCTGACGTCTTCCCCGCTGAACAGCGAGGATTGGCCATGA
GTGTCTTCGCGGGTAGTCCCTTCCTCGGACCGACCCTTGGCCCCGTCATC
GGCGGTTTCCTGGGCCAAAGCGCAGGTTGGCAATGGGTGGAAGGCTTCTT
AGCAGCCTTTACTGGCTTTATCTGGATCGTTCAGTTTCTCCTTGTTCCCG
AAACATACGCCCCAGTCCTCCTCCGCAAGCGCGCCGACCGTCTCAGCAAG
CTCACCGGCAAGACATATATCAGCAAACTCGACGTCGAGCGTGGCCGTGT
CTCTGTGACCAGCGCCTTCGGAGCGGCACTCCTGCGCCCATGGATCCTCC
TTTTCGCCGAGCCCATCGTCTTCCTTCTCTCGCTATACATGGCCATCGTC
TACGGCACGCTGTACATGCTCTTCGACGCCTTCCCGATCGTTTACCAACA
ACTGCGCGGCTGGAACGAAGGAGTAGGCAGTCTGCCCTTCTTGGGAGTCA
TGGTCGGAATGATGTCAGCTGTGGGATACAATATGTGGGACAACAAGCGG
TATAAGAGGGTGCACGAGAAACACCGTGGGTTCGCACCGCCTGAGGCCCG
CCTCCCTCCCTCTATGATTGGGAGTATCACTATTCCCATTGGTCTGTTCT
GGTTCGCCTGGACGAACGGTCTCAACGTCCACTGGATCGTCAGTATCATT
GCGTCTGCTCCGTTCGGATTCGGTATGGTCCTTGTTTTCTTGAACATCAT
GTCATACCTGATTGATGCGTACACGATCTATGCTGCCTCGGTTTTGGCCG
CCAATTCCATCATTCGAAGCTGCTTCGGTGCAGGCTTCCCTCTCTTCACA
ACATACATGTACCAGAACCTAGGTATTCATTGGGCATCTTCCATCCCGGC
TTTCTTATCGGTCGCCTGCTTGCCTTTCCCGTTCATCTTTTATAAGTATG
GTGCCGCTATTCGACGCAAGTGCAAGTATGCTGGAGAAGCGGACGCATTC
ATGAAGAAACTCGCTGAGAAGTCTTTGAACCCGGAGAAGAGCCAGGAAGT
TGTGGAGGAAGAGGCTGAAGCCGTTGCTGATGGCGTGGATGAGACCCGAG
TCGATCGAGAGTTGGACCTTGAGCGCGCCGAGTCGGTGGCTACGGCATCG
GTGTCGAGTGATGACCGTGAAGGTCGGAAGTATGAGGCGAACCCGTACGA
TATCGATCGGGTCAACACGAGAAACTCGGCGATCACCCAGAGATCGAGGT
CGCGGTCGGTCAAGTCGAAGCGGAAGAAGTTCCTCGGTTTCTAA
back to top

Coding sequence (CDS) from alignment at ch2:260529..262322+

>KJC3_001637-T1 ID=KJC3_001637-T1|Name=KJC3_001637-T1|organism=Aspergillus niger KJC3|type=CDS|length=1794bp|location=Sequence derived from alignment at ch2:260529..262322+ (Aspergillus niger KJC3)
ATGGCTAAGATCCCTCACTGGCGTCTGATTGTCGACCAGAGTGTCGTCAC
TCAGGAGATCATCGACTATCCCTATGCCGGCTCAGGGACCGAATCCGATC
CATTCATCGTAGAATGGATTCCCAATGACCCGCGTAACCCCATGCATTTT
AACAAGAACATGAAATGGGTCTACACCATCATTGCCGCGTTCGCGACCTT
TGGCGTTTCCATGGCCTCGTCGGCCTATGCGGGCAGTATCGACCAAGTGA
TTGAGCACTTTAACATCGGCACGGAGGTAGCCACCCTGGGTGTTTCACTG
TTCGTGCTTGGATTTGCTATTGGACCCCTCGTCTGGGCACCGCTGAGTGA
ACTCATTGGACGCCAACTCGTTTTCTTCGTCTCCTACATGGGCCTGGCTG
TATTCAGTGCTGGTGCAACAGGCTCGAAAAACCCATGGACAATCATCATT
CTACGCTTCTTTGCTGGCTCATTCGGATCCAGTCCTTTAACCAACGCCGG
TGGACTAATTGCTGACGTCTTCCCCGCTGAACAGCGAGGATTGGCCATGA
GTGTCTTCGCGGGTAGTCCCTTCCTCGGACCGACCCTTGGCCCCGTCATC
GGCGGTTTCCTGGGCCAAAGCGCAGGTTGGCAATGGGTGGAAGGCTTCTT
AGCAGCCTTTACTGGCTTTATCTGGATCGTTCAGTTTCTCCTTGTTCCCG
AAACATACGCCCCAGTCCTCCTCCGCAAGCGCGCCGACCGTCTCAGCAAG
CTCACCGGCAAGACATATATCAGCAAACTCGACGTCGAGCGTGGCCGTGT
CTCTGTGACCAGCGCCTTCGGAGCGGCACTCCTGCGCCCATGGATCCTCC
TTTTCGCCGAGCCCATCGTCTTCCTTCTCTCGCTATACATGGCCATCGTC
TACGGCACGCTGTACATGCTCTTCGACGCCTTCCCGATCGTTTACCAACA
ACTGCGCGGCTGGAACGAAGGAGTAGGCAGTCTGCCCTTCTTGGGAGTCA
TGGTCGGAATGATGTCAGCTGTGGGATACAATATGTGGGACAACAAGCGG
TATAAGAGGGTGCACGAGAAACACCGTGGGTTCGCACCGCCTGAGGCCCG
CCTCCCTCCCTCTATGATTGGGAGTATCACTATTCCCATTGGTCTGTTCT
GGTTCGCCTGGACGAACGGTCTCAACGTCCACTGGATCGTCAGTATCATT
GCGTCTGCTCCGTTCGGATTCGGTATGGTCCTTGTTTTCTTGAACATCAT
GTCATACCTGATTGATGCGTACACGATCTATGCTGCCTCGGTTTTGGCCG
CCAATTCCATCATTCGAAGCTGCTTCGGTGCAGGCTTCCCTCTCTTCACA
ACATACATGTACCAGAACCTAGGTATTCATTGGGCATCTTCCATCCCGGC
TTTCTTATCGGTCGCCTGCTTGCCTTTCCCGTTCATCTTTTATAAGTATG
GTGCCGCTATTCGACGCAAGTGCAAGTATGCTGGAGAAGCGGACGCATTC
ATGAAGAAACTCGCTGAGAAGTCTTTGAACCCGGAGAAGAGCCAGGAAGT
TGTGGAGGAAGAGGCTGAAGCCGTTGCTGATGGCGTGGATGAGACCCGAG
TCGATCGAGAGTTGGACCTTGAGCGCGCCGAGTCGGTGGCTACGGCATCG
GTGTCGAGTGATGACCGTGAAGGTCGGAAGTATGAGGCGAACCCGTACGA
TATCGATCGGGTCAACACGAGAAACTCGGCGATCACCCAGAGATCGAGGT
CGCGGTCGGTCAAGTCGAAGCGGAAGAAGTTCCTCGGTTTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001637KJC3_001637Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001637-T1.exon1KJC3_001637-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001637-T1.cdsKJC3_001637-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001637-T1KJC3_001637-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:260529..262322 +
Powered by Drupal