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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:276550..277711+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001642-T1 ID=KJC3_001642-T1|Name=KJC3_001642-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1162bp|location=Sequence derived from alignment at ch2:276550..277711+ (Aspergillus niger KJC3)
ATTATCTCTACAATGCGCCTCCTCAAATCTCTACTCGTGGCTGCATCTGC
CATAGCCAGCTGCAATGCCCTCCCGGGGGCTCTTCACAAAAGAGGTACCA
ATGCCCATTCCATACAACTTCCATTCCTCACCCCCACTGACCATTACTCC
TAGACATCACCACCCAACAGCTCGACACCTTCACCTTCTGGGTGCAATAT
GCGGCAGCCTCCTACTGCGAACCCAACTATGCCGGCAAGGCAGGCCACAA
AATAACCTGCTGGGCACAGAACTGCCCTGCAGTCGAAGCCTCCGACGCAA
CCATCATCACGGACTTCTCCAAGTACGCCCCTCCTTTCCCCTCCCATCAA
GAAAACCCTAACCAACCCCGCAGCACCACCCCCACCGACACATCCGGCTA
TCTAGCAGTCGACCACACGCACCGCGCCATCATCCTCGCCTTCCGCGGCA
GCTACTCCATCCGCAGCTGGCTGGCGGACTTCACCTTCGTCTACACCGAC
CCGAACCTTTGTAGTGGGTGTGAAGCCGAACTCGGCTTCTGGAGTTCGTG
GACAAACGTCCGCAAAACCATCACGCCGACCCTCAACAACACCGTATCCC
AATACCCGGACTATGAACTCGTTATTGTCGGCCACTCACTCGGCGCCGCC
ATCGCGACCCTCGCAGCAGCAGATATTCGCGAGACCGACGGGCTCAACGC
AACGTTATACGCATACGCATCGCCCCGCGTAGCGAACCCCAAGCTGGCTG
AGTTTATTACGAATCAGAATAAGGGGGCGAATTATCGATTTGCGCATACA
GATGATCCTGTGCCCAGGGTGCCGTTGGAGGTCATGGGGTATAAGCATAT
TAGTCCTGAGTATTGGATTAGCTCGGGGAATAACCAGAGTGTGAGTACGC
AGGATGTGGTGGTGTTCCAGGATGGCGATGATAAGAGGGGGGATGTTGGG
TTTCCGAATTTGTTGGACTTCGAGGCCCACCTTTGGTATTTTGAAGCCTG
GGAGGTCGATGCGTGTAAGGGGGAGGGATTGCCTTGGAAAAGGTCCAATT
AATTTAATGGTTGAGAGGTGAGGATTTGTGGAGTGGTGGCGGTGTTTAGG
GGTTGTATGAAGTTGGATTTAAGGTGACGTATATACTTAATAGTGTGGAT
ATAGTATTCGAT back to topCoding sequence (CDS) from alignment at ch2:276550..277711+ >KJC3_001642-T1 ID=KJC3_001642-T1|Name=KJC3_001642-T1|organism=Aspergillus niger KJC3|type=CDS|length=2790bp|location=Sequence derived from alignment at ch2:276550..277711+ (Aspergillus niger KJC3)
ATGCGCCTCCTCAAATCTCTACTCGTGGCTGCATCTGCCATAGCCAGCTG
CAATGCCCTCCCGGGGGCTCTTCACAAAAGAGACATCACCACCCAACAGC
TCGACACCTTCACCTTCTGGGTGCAATATGCGGCAGCCTCCTACTGCGAA
CCCAACTATGCCGGCAAGGCAGGCCACAAAATAACCTGCTGGGCACAGAA
CTGCCCTGCAGTCGAAGCCTCCGACGCAACCATCATCACGGACTTCTCCA
ACACCACCCCCACCGACACATCCGGCTATCTAGCAGTCGACCACACGCAC
CGCGCCATCATCCTCGCCTTCCGCGGCAGCTACTCCATCCGCAGCTGGCT
GGCGGACTTCACCTTCGTCTACACCGACCCGAACCTTTGTAGTGGGTGTG
AAGCCGAACTCGGCTTCTGGAGTTCGTGGACAAACGTCCGCAAAACCATC
ACGCCGACCCTCAACAACACCGTATCCCAATACCCGGACTATGAACTCGT
TATTGTCGGCCACTCACTCGGCGCCGCCATCGCGACCCTCGCAGCAGCAG
ATATTCGCGAGACCGACGGGCTCAACGCAACGTTATACGCATACGCATCG
CCCCGCGTAGCGAACCCCAAGCTGGCTGAGTTTATTACGAATCAGAATAA
GGGGGCGAATTATCGATTTGCGCATACAGATGATCCTGTGCCCAGGGTGC
CGTTGGAGGTCATGGGGTATAAGCATATTAGTCCTGAGTATTGGATTAGC
TCGGGGAATAACCAGAGTGTGAGTACGCAGGATGTGGTGGTGTTCCAGGA
TGGCGATGATAAGAGGGGGGATGTTGGGTTTCCGAATTTGTTGGACTTCG
AGGCCCACCTTTGGTATTTTGAAGCCTGGGAGGTCGATGCGTGTAAGGGG
GAGGGATTGCCTTGGAAAAGGTCCAATTAAATGCGCCTCCTCAAATCTCT
ACTCGTGGCTGCATCTGCCATAGCCAGCTGCAATGCCCTCCCGGGGGCTC
TTCACAAAAGAGACATCACCACCCAACAGCTCGACACCTTCACCTTCTGG
GTGCAATATGCGGCAGCCTCCTACTGCGAACCCAACTATGCCGGCAAGGC
AGGCCACAAAATAACCTGCTGGGCACAGAACTGCCCTGCAGTCGAAGCCT
CCGACGCAACCATCATCACGGACTTCTCCAACACCACCCCCACCGACACA
TCCGGCTATCTAGCAGTCGACCACACGCACCGCGCCATCATCCTCGCCTT
CCGCGGCAGCTACTCCATCCGCAGCTGGCTGGCGGACTTCACCTTCGTCT
ACACCGACCCGAACCTTTGTAGTGGGTGTGAAGCCGAACTCGGCTTCTGG
AGTTCGTGGACAAACGTCCGCAAAACCATCACGCCGACCCTCAACAACAC
CGTATCCCAATACCCGGACTATGAACTCGTTATTGTCGGCCACTCACTCG
GCGCCGCCATCGCGACCCTCGCAGCAGCAGATATTCGCGAGACCGACGGG
CTCAACGCAACGTTATACGCATACGCATCGCCCCGCGTAGCGAACCCCAA
GCTGGCTGAGTTTATTACGAATCAGAATAAGGGGGCGAATTATCGATTTG
CGCATACAGATGATCCTGTGCCCAGGGTGCCGTTGGAGGTCATGGGGTAT
AAGCATATTAGTCCTGAGTATTGGATTAGCTCGGGGAATAACCAGAGTGT
GAGTACGCAGGATGTGGTGGTGTTCCAGGATGGCGATGATAAGAGGGGGG
ATGTTGGGTTTCCGAATTTGTTGGACTTCGAGGCCCACCTTTGGTATTTT
GAAGCCTGGGAGGTCGATGCGTGTAAGGGGGAGGGATTGCCTTGGAAAAG
GTCCAATTAAATGCGCCTCCTCAAATCTCTACTCGTGGCTGCATCTGCCA
TAGCCAGCTGCAATGCCCTCCCGGGGGCTCTTCACAAAAGAGACATCACC
ACCCAACAGCTCGACACCTTCACCTTCTGGGTGCAATATGCGGCAGCCTC
CTACTGCGAACCCAACTATGCCGGCAAGGCAGGCCACAAAATAACCTGCT
GGGCACAGAACTGCCCTGCAGTCGAAGCCTCCGACGCAACCATCATCACG
GACTTCTCCAACACCACCCCCACCGACACATCCGGCTATCTAGCAGTCGA
CCACACGCACCGCGCCATCATCCTCGCCTTCCGCGGCAGCTACTCCATCC
GCAGCTGGCTGGCGGACTTCACCTTCGTCTACACCGACCCGAACCTTTGT
AGTGGGTGTGAAGCCGAACTCGGCTTCTGGAGTTCGTGGACAAACGTCCG
CAAAACCATCACGCCGACCCTCAACAACACCGTATCCCAATACCCGGACT
ATGAACTCGTTATTGTCGGCCACTCACTCGGCGCCGCCATCGCGACCCTC
GCAGCAGCAGATATTCGCGAGACCGACGGGCTCAACGCAACGTTATACGC
ATACGCATCGCCCCGCGTAGCGAACCCCAAGCTGGCTGAGTTTATTACGA
ATCAGAATAAGGGGGCGAATTATCGATTTGCGCATACAGATGATCCTGTG
CCCAGGGTGCCGTTGGAGGTCATGGGGTATAAGCATATTAGTCCTGAGTA
TTGGATTAGCTCGGGGAATAACCAGAGTGTGAGTACGCAGGATGTGGTGG
TGTTCCAGGATGGCGATGATAAGAGGGGGGATGTTGGGTTTCCGAATTTG
TTGGACTTCGAGGCCCACCTTTGGTATTTTGAAGCCTGGGAGGTCGATGC
GTGTAAGGGGGAGGGATTGCCTTGGAAAAGGTCCAATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016042 | lipid catabolic process |
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001642-T1.utr5p1 | KJC3_001642-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001642-T1.utr3p1 | KJC3_001642-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR005592 |
| DBxref | InterPro:IPR002921 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF01764 |
| DBxref | PFAM:PF03893 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:276550..277711 + |
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