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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:278391..279412- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001643-T1 ID=KJC3_001643-T1|Name=KJC3_001643-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1022bp|location=Sequence derived from alignment at ch2:278391..279412- (Aspergillus niger KJC3)
TCACCTTCCACTGTGCCACTACCATGCAGATATTCAAACGCATCTGGCCT
CAACTATTCCCCGCCAAACCCACCCTCACGGCAGACAGTCTGCCTCCCCA
AACTGGCCGCGTCGTGATCATCACCGGTGCCACCTCCGGTCTGGGGCTAG
AATTGGCTCGCATCCTCTACCATGCAGGAGCAACCGTTTACATCGCCGCC
CGCAACGAAACCAAGGCCCACAATGTCATAAACACCATCACCGCCACCAC
TTCCCCCAATCCCACAACTCAGCCGGGCGAACTCATCTACCTCCCCATTG
ATCTCGCCGACCTTCGCACTATCCCTATCTTCGTGAATGCATTCCTCGCC
AGCTCAAACAGACTAGACCTCCTCTTCAACAACGCCGCGGTGGCATGTCT
CCCCCCAACCCAGGTCACAGCCCAAGGCTACGAACCTCACATCGGCATCA
ACTGCGCAGCTTCCTACCTCCTGACTTCCCTCCTCTCTCCTATTTTGACT
TCCACAGCCCAAAGCCCATCTACACCACCCAACTCCGTCCGTGTCATCTT
CACCTCCAGCATGGTCGTCGACTTCCTCGCTCCGACGGGCGGTGTTCCGT
CCTCGGCCCTCACTTCTTCCCCGGATCCAAAATCAGACCCTAACACCAAC
TACGCCATCAGCAAAACCGGTAACTGGTTTCTGGCGGCGCATTTTGCCTC
TACCCTTGGGTCAAATGGTGTAGTCAGCTTTACTCAGAATCCCGGGAATA
TTGATACCTCCATTTATGACAATGCGCCGAGATTGAGTGTGTGGGTTAGT
AAACCGGTATTCTATACTCCGGAGGTTGGTGTAAGTACCCTCCTTTGGGC
GGGATTTGAGGAGGGGATTACCGTGGATGATGGGGGCAGGTATGTGATTC
CATTTGGGAGGTGGCATCCTAGTCCGAGGGAGGATTTGTTGGGGGCGATG
AGGGAGGGAGGATCGGGGGAGATGGGGAGGTTTGTGGAGTGGTGCGAGAG
GGTTACGAAGGAGTTTCGGTAG back to topCoding sequence (CDS) from alignment at ch2:278391..279412- >KJC3_001643-T1 ID=KJC3_001643-T1|Name=KJC3_001643-T1|organism=Aspergillus niger KJC3|type=CDS|length=999bp|location=Sequence derived from alignment at ch2:278391..279412- (Aspergillus niger KJC3)
ATGCAGATATTCAAACGCATCTGGCCTCAACTATTCCCCGCCAAACCCAC
CCTCACGGCAGACAGTCTGCCTCCCCAAACTGGCCGCGTCGTGATCATCA
CCGGTGCCACCTCCGGTCTGGGGCTAGAATTGGCTCGCATCCTCTACCAT
GCAGGAGCAACCGTTTACATCGCCGCCCGCAACGAAACCAAGGCCCACAA
TGTCATAAACACCATCACCGCCACCACTTCCCCCAATCCCACAACTCAGC
CGGGCGAACTCATCTACCTCCCCATTGATCTCGCCGACCTTCGCACTATC
CCTATCTTCGTGAATGCATTCCTCGCCAGCTCAAACAGACTAGACCTCCT
CTTCAACAACGCCGCGGTGGCATGTCTCCCCCCAACCCAGGTCACAGCCC
AAGGCTACGAACCTCACATCGGCATCAACTGCGCAGCTTCCTACCTCCTG
ACTTCCCTCCTCTCTCCTATTTTGACTTCCACAGCCCAAAGCCCATCTAC
ACCACCCAACTCCGTCCGTGTCATCTTCACCTCCAGCATGGTCGTCGACT
TCCTCGCTCCGACGGGCGGTGTTCCGTCCTCGGCCCTCACTTCTTCCCCG
GATCCAAAATCAGACCCTAACACCAACTACGCCATCAGCAAAACCGGTAA
CTGGTTTCTGGCGGCGCATTTTGCCTCTACCCTTGGGTCAAATGGTGTAG
TCAGCTTTACTCAGAATCCCGGGAATATTGATACCTCCATTTATGACAAT
GCGCCGAGATTGAGTGTGTGGGTTAGTAAACCGGTATTCTATACTCCGGA
GGTTGGTGTAAGTACCCTCCTTTGGGCGGGATTTGAGGAGGGGATTACCG
TGGATGATGGGGGCAGGTATGTGATTCCATTTGGGAGGTGGCATCCTAGT
CCGAGGGAGGATTTGTTGGGGGCGATGAGGGAGGGAGGATCGGGGGAGAT
GGGGAGGTTTGTGGAGTGGTGCGAGAGGGTTACGAAGGAGTTTCGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001643-T1.utr5p1 | KJC3_001643-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:278391..279412 - |
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