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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:318278..319367- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001660-T1 ID=KJC3_001660-T1|Name=KJC3_001660-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1090bp|location=Sequence derived from alignment at ch2:318278..319367- (Aspergillus niger KJC3)
CTGTCTTTCTTTCTTTCCTGGTTAAATTTCATCACACATAACCTACCACT
GCCACTCGGGTAGGGCTTATACAAAACAATGCTGTCTGCGGGGTTTATTC
CTTTGTCAGACCGAGTGTACCTGCGCAATGGCAGAAAGAGATCCAAAACG
ACCGGGACAGTCGAGCCAACAACAATCATCATTTTCGGCTGGGGTGACGG
TATGCCGAAGCATGTCTCAAAATACGCCGATGGCTTCCATGATCTATACC
CGTCCGCTCGGATTCTTGTTGTGTTGTCAAGCACCTTACAGGCTCTAAGC
CAACCTGTTGAAGAGCGGATACAAGACATGATGCCAGTCATTGATACCGT
TTTCCCTACTGCCACAGGAGGTGGCAATGGTGAAGAGCGAGTCCTCCTGC
ATTCTATGTCAAACACTGGTGGGATCTTCTTGGCTGCGGCCTTTACAGCC
TACCAAAAACGCCATGGCGCGGACAATAGATTTCCCCACAAGCTTCTCAT
TTGCGATTCAACGCCCGGTGGGCTTTCTCTCTCCAGACAAGCCGGCCGTT
GGTCGCGGGCTATGGCTGTGGGCACATCCAAGTTATTTCCGTGGCCGTTT
ATTGTCACGCAAGCCTTGTGGTTTGTTTTACTTTGGGTTCACTACATACT
GGAGCGGCTGCGCGGACTTGAGCCTTCTGGAGTATGGGCTGATCGTGTAA
TGAATGATGAGTCAGTCACAACTCGAGAGTCCAGCCGGCTGTACTTGTAT
TCCAAGGAAGACGAGATTATAGGATTCGAGGACCTCGAAGAAAATGTCGC
CCAAGTTAAAACCCTGGGCTACCAGGCGGTTGACCTCGAGTTGTTCGAGG
GCTCACCGCATGTTGGTCATATGAAGCTACATCCACAGCAGTACTGGGGG
AAGATCTCAGAGTGCTGGAAAGCGGCCATAGCCAGGAAATGATGGTTCTA
ATCGGCCGCGAACAATGGGTCATACAAGTGCCAGCTTTGACTCCTCAGAA
CCATGGACGAATGAGTCATGCAAACTGTCGAAAAGCCATGTAGTGCCTTT
CTTACATGGATCCCGAGCCGACGCCGCATGTTAGATGAGC back to topCoding sequence (CDS) from alignment at ch2:318278..319367- >KJC3_001660-T1 ID=KJC3_001660-T1|Name=KJC3_001660-T1|organism=Aspergillus niger KJC3|type=CDS|length=864bp|location=Sequence derived from alignment at ch2:318278..319367- (Aspergillus niger KJC3)
ATGCTGTCTGCGGGGTTTATTCCTTTGTCAGACCGAGTGTACCTGCGCAA
TGGCAGAAAGAGATCCAAAACGACCGGGACAGTCGAGCCAACAACAATCA
TCATTTTCGGCTGGGGTGACGGTATGCCGAAGCATGTCTCAAAATACGCC
GATGGCTTCCATGATCTATACCCGTCCGCTCGGATTCTTGTTGTGTTGTC
AAGCACCTTACAGGCTCTAAGCCAACCTGTTGAAGAGCGGATACAAGACA
TGATGCCAGTCATTGATACCGTTTTCCCTACTGCCACAGGAGGTGGCAAT
GGTGAAGAGCGAGTCCTCCTGCATTCTATGTCAAACACTGGTGGGATCTT
CTTGGCTGCGGCCTTTACAGCCTACCAAAAACGCCATGGCGCGGACAATA
GATTTCCCCACAAGCTTCTCATTTGCGATTCAACGCCCGGTGGGCTTTCT
CTCTCCAGACAAGCCGGCCGTTGGTCGCGGGCTATGGCTGTGGGCACATC
CAAGTTATTTCCGTGGCCGTTTATTGTCACGCAAGCCTTGTGGTTTGTTT
TACTTTGGGTTCACTACATACTGGAGCGGCTGCGCGGACTTGAGCCTTCT
GGAGTATGGGCTGATCGTGTAATGAATGATGAGTCAGTCACAACTCGAGA
GTCCAGCCGGCTGTACTTGTATTCCAAGGAAGACGAGATTATAGGATTCG
AGGACCTCGAAGAAAATGTCGCCCAAGTTAAAACCCTGGGCTACCAGGCG
GTTGACCTCGAGTTGTTCGAGGGCTCACCGCATGTTGGTCATATGAAGCT
ACATCCACAGCAGTACTGGGGGAAGATCTCAGAGTGCTGGAAAGCGGCCA
TAGCCAGGAAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001660-T1.utr3p1 | KJC3_001660-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001660-T1.utr5p1 | KJC3_001660-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008547 |
| DBxref | PFAM:PF05705 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:318278..319367 - |
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