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KJC3_001667-T2, KJC3_001667-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001667-T2
Unique NameKJC3_001667-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:333851..335632-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001667-T2 ID=KJC3_001667-T2|Name=KJC3_001667-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1782bp|location=Sequence derived from alignment at ch2:333851..335632- (Aspergillus niger KJC3)
AATTCTCCTTCTTCCACCGCTATTCTTCAATCGGGGCCAGCGCCAGCTAG
CCACGAGTGAATCAATGGGTCATCCGGAAGCGACCGAGACCCCTGGTCAG
TGCATTACTAATGCAAGTGAGGGGCTTCTCCAGCTCGATGAGAAGGAAGA
TCCCAGACAATGGCCAAAAGCCAGAAAGTGTAAGAAATGCTCCTATTTGG
TCTGTGACAGTGGGATCATGGAGTTAATCAACATCCAACGATGATTTAGG
GGTGTGTACGGTGATCGTGGCGGTGATGACGGGAGTAATCGCCTTTTGTT
CGAGTATTTACACCGCTGGAACCAGCCTCATCACTGCCACATATGGCTGT
TCACGCACCGTTGCCACTCTTGGAGTGACGACATTTCTGTTGGGATTTGC
ATCAGGGCCCCTCATCTTCGCTCCTCTGTCTGAAGTCTAGTCAGTCTGTC
GAATCTCTCTGTCCCTTGGCTGCTGGCTCATGCGTCTAGGGTTGATGTAG
CGGCCGCAACCACATTTTCCGGGTTACTCTAGGACTGTTTGTTCTCTTCC
AGATCGGCTGTGCGTTGGCACCAAATATCTCATCGCTCATCATTTTTCGA
TTCTTCGCCGGATTTTTCGGTTCTCCGTCGGTCACCAACTCGGGCGGGTC
TATCACAGATCTCTGGCCGCAAAGCGAACGGTCTGTTCCCTTGGCTTTGT
TTTCCGCAGGAAGCTTCCTTGGACCCGTCTTCGCGCCAGTTGCTGGCGGG
TTCATTTCCGAGTATCTCTCCTGGAGATGGAACTTTTGGGTGGTCCTCAT
CGTCAGTGGCGTAGTTTATGCGGCATGCGTGCTCTTCCTCCCAGAAACAT
ACGCCCCCAAACTCCTACGAGATAAGGCTCGTCGCCAGGGCATCGTCCAG
ACCGGTCCCCCTCTCAACTCACAACTTATGACCTCTTTAACCCGTCCTTG
GCTGATGCTATTTGCGGAGCCCATCCTCTTTCTACTATCCCTCTATATGG
CATTCATCTACGGGATCCTATACCTCGACTTCACAGCCTATCCAATCGTA
TATGAACAGTCCCGTGACTGGACCCCCGGTATCGCCGGGCTTTCCTTCCT
AGGCATGGGCACAGGTATGGCAATAGCCACAATCGCCTCACCATACGTGA
ACAAGATTCACGCGACATATGTCACCAAACTTGGCCCGGAGCCAGAAGCT
CGACTACCCCACATTATCATCTTGGCCTGGCTGATCCCCGCCAGCTTGTT
CTGGTTTGGTTGGACCGCGATGCCCCCGATACACTGGATCGTAGGCATTG
TATCAGGGGCACCATTCGGCTTCAGTCTCATTCTACTCTTTCTCGCCATT
ACTTCATATCTCACGGATTGTTACGGACCATATGGCGCAAGTGCGCTTGC
GGCCAATGCAGTCTTCCGTTCGGTTTTTGGAGCAGTCTTCCCACTGTTTG
GCCCATATCTGTATGACGGCTTGGGGGTACCCTGGGGCTCTAGCTTGTTA
GGATTCTTTGCCCTGGCGTTTGCTCCCCTCCCATGGGTGTTTTATCACTT
CGGGCCGAGAATTCGCTTGAGAAGCAAGTATCATATGATGATGAAGTCTC
AGGGCTTATAGAGACTGATCTCGACCTGACGTGGCTAAATAGTTATGCTA
AATTTTGTTCCTGCTGCAAAGGAAAAGTAATTGGAAACATGAGACTCCGA
AACTGTCCAGCCGGAAACTGGTCTCAGAATCTCCTCTCTACATCAAGACA
TGAATATAGTACCCTGCACCGCGTCGCATACC
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Coding sequence (CDS) from alignment at ch2:333851..335632-

>KJC3_001667-T2 ID=KJC3_001667-T2|Name=KJC3_001667-T2|organism=Aspergillus niger KJC3|type=CDS|length=2550bp|location=Sequence derived from alignment at ch2:333851..335632- (Aspergillus niger KJC3)
CGGCCGCAACCACATTTTCCGGGTTACTCTAGGACTGTTTGTTCTCTTCC
AGATCGGCTGTGCGTTGGCACCAAATATCTCATCGCTCATCATTTTTCGA
TTCTTCGCCGGATTTTTCGGTTCTCCGTCGGTCACCAACTCGGGCGGGTC
TATCACAGATCTCTGGCCGCAAAGCGAACGGTCTGTTCCCTTGGCTTTGT
TTTCCGCAGGAAGCTTCCTTGGACCCGTCTTCGCGCCAGTTGCTGGCGGG
TTCATTTCCGAGTATCTCTCCTGGAGATGGAACTTTTGGGTGGTCCTCAT
CGTCAGTGGCGTAGTTTATGCGGCATGCGTGCTCTTCCTCCCAGAAACAT
ACGCCCCCAAACTCCTACGAGATAAGGCTCGTCGCCAGGGCATCGTCCAG
ACCGGTCCCCCTCTCAACTCACAACTTATGACCTCTTTAACCCGTCCTTG
GCTGATGCTATTTGCGGAGCCCATCCTCTTTCTACTATCCCTCTATATGG
CATTCATCTACGGGATCCTATACCTCGACTTCACAGCCTATCCAATCGTA
TATGAACAGTCCCGTGACTGGACCCCCGGTATCGCCGGGCTTTCCTTCCT
AGGCATGGGCACAGGTATGGCAATAGCCACAATCGCCTCACCATACGTGA
ACAAGATTCACGCGACATATGTCACCAAACTTGGCCCGGAGCCAGAAGCT
CGACTACCCCACATTATCATCTTGGCCTGGCTGATCCCCGCCAGCTTGTT
CTGGTTTGGTTGGACCGCGATGCCCCCGATACACTGGATCGTAGGCATTG
TATCAGGGGCACCATTCGGCTTCAGTCTCATTCTACTCTTTCTCGCCATT
ACTTCATATCTCACGGATTGTTACGGACCATATGGCGCAAGTGCGCTTGC
GGCCAATGCAGTCTTCCGTTCGGTTTTTGGAGCAGTCTTCCCACTGTTTG
GCCCATATCTGTATGACGGCTTGGGGGTACCCTGGGGCTCTAGCTTGTTA
GGATTCTTTGCCCTGGCGTTTGCTCCCCTCCCATGGGTGTTTTATCACTT
CGGGCCGAGAATTCGCTTGAGAAGCAAGTATCATATGATGATGAAGTCTC
AGGGCTTATAGATGACGGGAGTAATCGCCTTTTGTTCGAGTATTTACACC
GCTGGAACCAGCCTCATCACTGCCACATATGGCTGTTCACGCACCGTTGC
CACTCTTGGAGTGACGACATTTCTGTTGGGATTTGCATCAGGGCCCCTCA
TCTTCGCTCCTCTGTCTGAAGTCTACGGCCGCAACCACATTTTCCGGGTT
ACTCTAGGACTGTTTGTTCTCTTCCAGATCGGCTGTGCGTTGGCACCAAA
TATCTCATCGCTCATCATTTTTCGATTCTTCGCCGGATTTTTCGGTTCTC
CGTCGGTCACCAACTCGGGCGGGTCTATCACAGATCTCTGGCCGCAAAGC
GAACGGTCTGTTCCCTTGGCTTTGTTTTCCGCAGGAAGCTTCCTTGGACC
CGTCTTCGCGCCAGTTGCTGGCGGGTTCATTTCCGAGTATCTCTCCTGGA
GATGGAACTTTTGGGTGGTCCTCATCGTCAGTGGCGTAGTTTATGCGGCA
TGCGTGCTCTTCCTCCCAGAAACATACGCCCCCAAACTCCTACGAGATAA
GGCTCGTCGCCAGGGCATCGTCCAGACCGGTCCCCCTCTCAACTCACAAC
TTATGACCTCTTTAACCCGTCCTTGGCTGATGCTATTTGCGGAGCCCATC
CTCTTTCTACTATCCCTCTATATGGCATTCATCTACGGGATCCTATACCT
CGACTTCACAGCCTATCCAATCGTATATGAACAGTCCCGTGACTGGACCC
CCGGTATCGCCGGGCTTTCCTTCCTAGGCATGGGCACAGGTATGGCAATA
GCCACAATCGCCTCACCATACGTGAACAAGATTCACGCGACATATGTCAC
CAAACTTGGCCCGGAGCCAGAAGCTCGACTACCCCACATTATCATCTTGG
CCTGGCTGATCCCCGCCAGCTTGTTCTGGTTTGGTTGGACCGCGATGCCC
CCGATACACTGGATCGTAGGCATTGTATCAGGGGCACCATTCGGCTTCAG
TCTCATTCTACTCTTTCTCGCCATTACTTCATATCTCACGGATTGTTACG
GACCATATGGCGCAAGTGCGCTTGCGGCCAATGCAGTCTTCCGTTCGGTT
TTTGGAGCAGTCTTCCCACTGTTTGGCCCATATCTGTATGACGGCTTGGG
GGTACCCTGGGGCTCTAGCTTGTTAGGATTCTTTGCCCTGGCGTTTGCTC
CCCTCCCATGGGTGTTTTATCACTTCGGGCCGAGAATTCGCTTGAGAAGC
AAGTATCATATGATGATGAAGTCTCAGGGCTTATAGATGACGGGAGTAAT
CGCCTTTTGTTCGAGTATTTACACCGCTGGAACCAGCCTCATCACTGCCA
CATATGGCTGTTCACGCACCGTTGCCACTCTTGGAGTGACGACATTTCTG
TTGGGATTTGCATCAGGGCCCCTCATCTTCGCTCCTCTGTCTGAAGTCTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001667KJC3_001667Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001667-T2KJC3_001667-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001667-T2.cdsKJC3_001667-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001667-T2.utr3p1KJC3_001667-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001667-T2.exon2KJC3_001667-T2.exon2Aspergillus niger KJC3exon
KJC3_001667-T2.exon1KJC3_001667-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001667-T2.utr5p1KJC3_001667-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:333851..335632 -
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