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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:342770..345057+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001669-T1 ID=KJC3_001669-T1|Name=KJC3_001669-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2288bp|location=Sequence derived from alignment at ch2:342770..345057+ (Aspergillus niger KJC3)
GTGATAACCTCTACAGTGGATCCAGCTTCAGGTCCGGATCCACGGTGGCT
TGCTTGGCGGTGCTGGAGAATTCCCATCGAGGCCAATCACGGCCAACTGC
GACTCGTTCGCGTCGTCGTTGGTCTCCGCCGCGAATGGATATCGGTTTCG
ATGGATCGCTTCGACGCCGCGTGGATGGGGCGCTTTGGTATCCGTTTCGG
GGGTTGAAGCTGTTGGAGCCACCCTCTCCTGAACGACTAACCCGACCGTA
TGCGACATTCTTATTCTCGCTGGTGCTCCGCCTGCCTCGAGGCAAAATTC
GATGATATGATGAGTGCCGACTCTCCGCCCTGCCGTCGCTCCCGAGAAGA
CTATCTTCCCAGATAGTTCCTTTTGTTCCGCCTTACCCCAGATCCGAAAC
TTTGTCTCCTTTCCTCCCTCCCCTGGACAGCTCTCGTCGCTCTGTCCATC
CGCGATGATCCAATGTCCTCGTGGACTTCTGCCCTCTCTCGCGCCAATCG
CCTGCGTTCAAGGCTCTCCGCCCTCCATGTCGTTACGGTTGGCGCCATAA
TCAGTCTCTCCTATCTCTTCTACACCTTCGCCGTTCCCCAGCTGAATCGA
CTAAGGCTTCGCGCGGATCTGAGTTGGTATGACCTGGGCCTGTACGGTTT
CGGTCCGTCGAAAAGTTATGTTTCCTTCGATTATGAATCTCCCGCGGTAC
AGATCTCGGAATGGGAGTCGGGCTGCGACTCGCGATATACCTTTCTAGCC
CCTAGGGGTGACTCAGTGGCCCAGCCGGGGCCTATGATCCTTGATTCCAA
GGGGGAGCTGGTGTGGATGAAATACAACTGGGACGTGACTCAGGACTTCA
AGGTCCAGCGATATCAGGACACAGACTATCTGACATACTGGGAAGGTGGT
GAAACTGAAGGTCGGGGCTATGGGGCATGGTATATGGTAGGTGGTACACA
ACCCTGTCGTATGGTGTAGCGTGCTGATCTAGACAGCTGGATTCGACATA
TACCCAGCGATATGTGATTTCCCCAGTAGGGAATTATGGTGGTGATCTCC
ACGAATTTACCATCACCCCCGAAGGAACGGCTCTCGTTACGATATACGAT
CCAGTGCCGGCCGACCTCACTCCCGTTGGAGGCCCCGAACTGGGCTGGGT
ATATGATGGCGTCTTCCAGGAAATTGATATCGCTACGGGCGAGCTGATCT
TCGAATGGCGCGCGTCAAAGCATTATTCCATTAACAGCACGTACGAACAC
TTAGGCAAGTCGGGAAGAGTGCGCGGGTATGCGTTTGACTTCTACCACAT
CAACAGTGTGGACAAGGATGACAATGGGAACTATATTGTTTCCGCACGCC
ATACCCATACCGTGAGCTGCATAGACAAGGACACTGGTGAAGTGTTATGG
ACCCTGGGCGGCAAGTTGAATGAGTTCCACGATCTTTCAGATGGGCAGGC
CACCAATTTCGCCTGGCAGCATGATGCACGGTGGCACGCCAACAATACCT
TGACTCTTTTTGACAATGCATCACATTCAAACGATGATCCGGATAACGAA
AGTCGTGGAGTGGTTATCGATCTTGACGTTACCGCTCGCCAAGCGTCATT
GCGCGCTGAGTACTATCATCCTCAGCAAATGCGGTCCTTGTCCCAGGGAA
ACGTCCAAGTTCTGGACGATAGTGGCCGAGTTCTCGTCGAGTGGGGTCAC
AGCGCAGCTTTCAGCGAGTTTAGTGCCGACGGGCAACTGCTATGCAACAC
TCATTTCGGTGCCTCTGCCTTCTTTGGGTTTGGCAGAGTAGTATCTTACC
GTGCCTTCAAGGGCACCTGGGTTGGCCGACCGCAGACGGTCCCCGACGCC
GAAGTATTAGGAAATCACGTGTATGTGAGCTGGAACGGCGCAACAGAGGT
TGTTGCGTGGAGACTGGAAGTTTGGGACTCAGATGACTTGAATGACAATA
CGTTTCGTGTTGTGTCCCAATTCCAGAAAGATGGCTTCGAGACGGAGATA
GAGATTCCGGAGGGTCTTGAGCTTCCTTTGTTCCGACTGGCAGCGCTGGA
TTCGGATGGGAATGTTCTAGGCGCCACCGAGCTGCTCCAGCGAGAGCAGG
GTGGGAGCTTTGAGCAGGTCATGAACCCTCAGTACTGGGTTATTGTCATG
GCCTTTGTCATCAGTGGAGTTGGCTTGTTTGTTGGTCTCTATACGTGCTG
CGGCTGGGGCCGTTATTTCCGTCGGTGTCGCTCACGGTCCAGCGAGTACC
AATTGGTTGCCTTCAGCGACAGCGATGGTTCCGTTTGA back to topCoding sequence (CDS) from alignment at ch2:342770..345057+ >KJC3_001669-T1 ID=KJC3_001669-T1|Name=KJC3_001669-T1|organism=Aspergillus niger KJC3|type=CDS|length=3552bp|location=Sequence derived from alignment at ch2:342770..345057+ (Aspergillus niger KJC3)
ATGTCCTCGTGGACTTCTGCCCTCTCTCGCGCCAATCGCCTGCGTTCAAG
GCTCTCCGCCCTCCATGTCGTTACGGTTGGCGCCATAATCAGTCTCTCCT
ATCTCTTCTACACCTTCGCCGTTCCCCAGCTGAATCGACTAAGGCTTCGC
GCGGATCTGAGTTGGTATGACCTGGGCCTGTACGGTTTCGGTCCGTCGAA
AAGTTATGTTTCCTTCGATTATGAATCTCCCGCGGTACAGATCTCGGAAT
GGGAGTCGGGCTGCGACTCGCGATATACCTTTCTAGCCCCTAGGGGTGAC
TCAGTGGCCCAGCCGGGGCCTATGATCCTTGATTCCAAGGGGGAGCTGGT
GTGGATGAAATACAACTGGGACGTGACTCAGGACTTCAAGGTCCAGCGAT
ATCAGGACACAGACTATCTGACATACTGGGAAGGTGGTGAAACTGAAGGT
CGGGGCTATGGGGCATGGTATATGCTGGATTCGACATATACCCAGCGATA
TGTGATTTCCCCAGTAGGGAATTATGGTGGTGATCTCCACGAATTTACCA
TCACCCCCGAAGGAACGGCTCTCGTTACGATATACGATCCAGTGCCGGCC
GACCTCACTCCCGTTGGAGGCCCCGAACTGGGCTGGGTATATGATGGCGT
CTTCCAGGAAATTGATATCGCTACGGGCGAGCTGATCTTCGAATGGCGCG
CGTCAAAGCATTATTCCATTAACAGCACGTACGAACACTTAGGCAAGTCG
GGAAGAGTGCGCGGGTATGCGTTTGACTTCTACCACATCAACAGTGTGGA
CAAGGATGACAATGGGAACTATATTGTTTCCGCACGCCATACCCATACCG
TGAGCTGCATAGACAAGGACACTGGTGAAGTGTTATGGACCCTGGGCGGC
AAGTTGAATGAGTTCCACGATCTTTCAGATGGGCAGGCCACCAATTTCGC
CTGGCAGCATGATGCACGGTGGCACGCCAACAATACCTTGACTCTTTTTG
ACAATGCATCACATTCAAACGATGATCCGGATAACGAAAGTCGTGGAGTG
GTTATCGATCTTGACGTTACCGCTCGCCAAGCGTCATTGCGCGCTGAGTA
CTATCATCCTCAGCAAATGCGGTCCTTGTCCCAGGGAAACGTCCAAGTTC
TGGACGATAGTGGCCGAGTTCTCGTCGAGTGGGGTCACAGCGCAGCTTTC
AGCGAGTTTAGTGCCGACGGGCAACTGCTATGCAACACTCATTTCGGTGC
CTCTGCCTTCTTTGGGTTTGGCAGAGTAGTATCTTACCGTGCCTTCAAGG
GCACCTGGGTTGGCCGACCGCAGACGGTCCCCGACGCCGAAGTATTAGGA
AATCACGTGTATGTGAGCTGGAACGGCGCAACAGAGGTTGTTGCGTGGAG
ACTGGAAGTTTGGGACTCAGATGACTTGAATGACAATACGTTTCGTGTTG
TGTCCCAATTCCAGAAAGATGGCTTCGAGACGGAGATAGAGATTCCGGAG
GGTCTTGAGCTTCCTTTGTTCCGACTGGCAGCGCTGGATTCGGATGGGAA
TGTTCTAGGCGCCACCGAGCTGCTCCAGCGAGAGCAGGGTGGGAGCTTTG
AGCAGGTCATGAACCCTCAGTACTGGGTTATTGTCATGGCCTTTGTCATC
AGTGGAGTTGGCTTGTTTGTTGGTCTCTATACGTGCTGCGGCTGGGGCCG
TTATTTCCGTCGGTGTCGCTCACGGTCCAGCGAGTACCAATTGGTTGCCT
TCAGCGACAGCGATGGTTCCGTTTGAATGTCCTCGTGGACTTCTGCCCTC
TCTCGCGCCAATCGCCTGCGTTCAAGGCTCTCCGCCCTCCATGTCGTTAC
GGTTGGCGCCATAATCAGTCTCTCCTATCTCTTCTACACCTTCGCCGTTC
CCCAGCTGAATCGACTAAGGCTTCGCGCGGATCTGAGTTGGTATGACCTG
GGCCTGTACGGTTTCGGTCCGTCGAAAAGTTATGTTTCCTTCGATTATGA
ATCTCCCGCGGTACAGATCTCGGAATGGGAGTCGGGCTGCGACTCGCGAT
ATACCTTTCTAGCCCCTAGGGGTGACTCAGTGGCCCAGCCGGGGCCTATG
ATCCTTGATTCCAAGGGGGAGCTGGTGTGGATGAAATACAACTGGGACGT
GACTCAGGACTTCAAGGTCCAGCGATATCAGGACACAGACTATCTGACAT
ACTGGGAAGGTGGTGAAACTGAAGGTCGGGGCTATGGGGCATGGTATATG
CTGGATTCGACATATACCCAGCGATATGTGATTTCCCCAGTAGGGAATTA
TGGTGGTGATCTCCACGAATTTACCATCACCCCCGAAGGAACGGCTCTCG
TTACGATATACGATCCAGTGCCGGCCGACCTCACTCCCGTTGGAGGCCCC
GAACTGGGCTGGGTATATGATGGCGTCTTCCAGGAAATTGATATCGCTAC
GGGCGAGCTGATCTTCGAATGGCGCGCGTCAAAGCATTATTCCATTAACA
GCACGTACGAACACTTAGGCAAGTCGGGAAGAGTGCGCGGGTATGCGTTT
GACTTCTACCACATCAACAGTGTGGACAAGGATGACAATGGGAACTATAT
TGTTTCCGCACGCCATACCCATACCGTGAGCTGCATAGACAAGGACACTG
GTGAAGTGTTATGGACCCTGGGCGGCAAGTTGAATGAGTTCCACGATCTT
TCAGATGGGCAGGCCACCAATTTCGCCTGGCAGCATGATGCACGGTGGCA
CGCCAACAATACCTTGACTCTTTTTGACAATGCATCACATTCAAACGATG
ATCCGGATAACGAAAGTCGTGGAGTGGTTATCGATCTTGACGTTACCGCT
CGCCAAGCGTCATTGCGCGCTGAGTACTATCATCCTCAGCAAATGCGGTC
CTTGTCCCAGGGAAACGTCCAAGTTCTGGACGATAGTGGCCGAGTTCTCG
TCGAGTGGGGTCACAGCGCAGCTTTCAGCGAGTTTAGTGCCGACGGGCAA
CTGCTATGCAACACTCATTTCGGTGCCTCTGCCTTCTTTGGGTTTGGCAG
AGTAGTATCTTACCGTGCCTTCAAGGGCACCTGGGTTGGCCGACCGCAGA
CGGTCCCCGACGCCGAAGTATTAGGAAATCACGTGTATGTGAGCTGGAAC
GGCGCAACAGAGGTTGTTGCGTGGAGACTGGAAGTTTGGGACTCAGATGA
CTTGAATGACAATACGTTTCGTGTTGTGTCCCAATTCCAGAAAGATGGCT
TCGAGACGGAGATAGAGATTCCGGAGGGTCTTGAGCTTCCTTTGTTCCGA
CTGGCAGCGCTGGATTCGGATGGGAATGTTCTAGGCGCCACCGAGCTGCT
CCAGCGAGAGCAGGGTGGGAGCTTTGAGCAGGTCATGAACCCTCAGTACT
GGGTTATTGTCATGGCCTTTGTCATCAGTGGAGTTGGCTTGTTTGTTGGT
CTCTATACGTGCTGCGGCTGGGGCCGTTATTTCCGTCGGTGTCGCTCACG
GTCCAGCGAGTACCAATTGGTTGCCTTCAGCGACAGCGATGGTTCCGTTT
GA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001669-T1.utr5p1 | KJC3_001669-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011047 |
| DBxref | InterPro:IPR039535 |
| DBxref | PFAM:PF14269 |
| DBxref | PFAM:PF05935 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:342770..345057 + |
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