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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:347606..348763- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001671-T1 ID=KJC3_001671-T1|Name=KJC3_001671-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1158bp|location=Sequence derived from alignment at ch2:347606..348763- (Aspergillus niger KJC3)
CATCCTTTCTACACTCATTCATTTTTTTTTTTTTGCATTGTCACTCTTTT
CTCTGCGACCGGCTCGCTTCCAATTCTACGTTCTTTAAGAATTCCTTCGT
ATCGATCAGCATGCGCTACTCCTCCGTCGCCGTCCCTCTGGCCTTTGCTG
CCCGTGCCGCTGCCGTCACCAGTGATGCCTGGGCCTTCGGGAACGGGTTC
TACACCGGTCCCCCCACGAACGCGCACATCACCAGGGCCACCTGGTCCTT
GGTGCCTCCCGATGTTCCCTCGAACGTCACTGTGAAGAACTCCGACGACG
AGGTCTGGGTGTCGCTGTGGATTGGCCTGTCCTCTACTGCGGGTGACTAC
GACGCCGATCTCTACCAGCCCCTGCTGAACTGGTCTCCTGACAACGAGTC
CCAGTACGTTCATCAACTCCTCAATGATTTAGGAAGTGTATGCTGACGAT
CAAAGGGGATGCCCCGCTCCGGATGACGAGTGGTGTGTCGCTGCGAGCAC
GTACACTCCTGGTTAGTGAACTAGCTCAAATGTCCCGGTTCCATATACTA
ATGATGTGTCTAGATGGTCAGAATGGCCAGGCCTACGTGACTGTTCCCGC
GGACACCCAGGTGGACTTTGAGGGTATGTCCAGATCCCAAATCCAAGAAT
AGTATGAATCACTGTCCTAACAACCATTACCCACAGTCTACGTCGAAAAC
AACAAGGTGTACCAGGTCGTCACCATGAACGGCAAGACCGTCTCCAAGGA
GAGCGACGGTCCGTTGTTCCCAGTACCATCCTCAACTTGTTTAACATCAT
ACTAACTACCAATAATCCAGCCCTCGACAACCCCCTCCTCTACCTCTACT
CCGGAGACGAGTGCTACACCGGCTCCGGTGACTGCGGTACTCTCCAATCC
TACAGTACGGCTACTTCTCTCACCCCCTGCACCCTTCTACATCAGCGGAT
ACCTGACCTAATATGGAATTAAATAGGCTGGAACAACATCACCATCCACC
TCAGCGCTGCCGACGAGAACTTCGGTGACACTCTCTCCCTGTATAGCGGC
TCTGCCTCTAACGGCCTCACCACCTCCGACAAGGGCAAGACCTGGCACAC
CGATGCTATCAAGATCTCCAAGGACACTTTTGCCAATGTTGAGGCTTAAA
CTGTGGGG back to topCoding sequence (CDS) from alignment at ch2:347606..348763- >KJC3_001671-T1 ID=KJC3_001671-T1|Name=KJC3_001671-T1|organism=Aspergillus niger KJC3|type=CDS|length=4428bp|location=Sequence derived from alignment at ch2:347606..348763- (Aspergillus niger KJC3)
GCTGGAACAACATCACCATCCACCTCAGCGCTGCCGACGAGAACTTCGGT
GACACTCTCTCCCTGTATAGCGGCTCTGCCTCTAACGGCCTCACCACCTC
CGACAAGGGCAAGACCTGGCACACCGATGCTATCAAGATCTCCAAGGACA
CTTTTGCCAATGTTGAGGCTTAACCCTCGACAACCCCCTCCTCTACCTCT
ACTCCGGAGACGAGTGCTACACCGGCTCCGGTGACTGCGGTACTCTCCAA
TCCTACATCTACGTCGAAAACAACAAGGTGTACCAGGTCGTCACCATGAA
CGGCAAGACCGTCTCCAAGGAGAGCGACGATGGTCAGAATGGCCAGGCCT
ACGTGACTGTTCCCGCGGACACCCAGGTGGACTTTGAGGGGGATGCCCCG
CTCCGGATGACGAGTGGTGTGTCGCTGCGAGCACGTACACTCCTGATGCG
CTACTCCTCCGTCGCCGTCCCTCTGGCCTTTGCTGCCCGTGCCGCTGCCG
TCACCAGTGATGCCTGGGCCTTCGGGAACGGGTTCTACACCGGTCCCCCC
ACGAACGCGCACATCACCAGGGCCACCTGGTCCTTGGTGCCTCCCGATGT
TCCCTCGAACGTCACTGTGAAGAACTCCGACGACGAGGTCTGGGTGTCGC
TGTGGATTGGCCTGTCCTCTACTGCGGGTGACTACGACGCCGATCTCTAC
CAGCCCCTGCTGAACTGGTCTCCTGACAACGAGTCCCAGCTGGAACAACA
TCACCATCCACCTCAGCGCTGCCGACGAGAACTTCGGTGACACTCTCTCC
CTGTATAGCGGCTCTGCCTCTAACGGCCTCACCACCTCCGACAAGGGCAA
GACCTGGCACACCGATGCTATCAAGATCTCCAAGGACACTTTTGCCAATG
TTGAGGCTTAACCCTCGACAACCCCCTCCTCTACCTCTACTCCGGAGACG
AGTGCTACACCGGCTCCGGTGACTGCGGTACTCTCCAATCCTACATCTAC
GTCGAAAACAACAAGGTGTACCAGGTCGTCACCATGAACGGCAAGACCGT
CTCCAAGGAGAGCGACGATGGTCAGAATGGCCAGGCCTACGTGACTGTTC
CCGCGGACACCCAGGTGGACTTTGAGGGGGATGCCCCGCTCCGGATGACG
AGTGGTGTGTCGCTGCGAGCACGTACACTCCTGATGCGCTACTCCTCCGT
CGCCGTCCCTCTGGCCTTTGCTGCCCGTGCCGCTGCCGTCACCAGTGATG
CCTGGGCCTTCGGGAACGGGTTCTACACCGGTCCCCCCACGAACGCGCAC
ATCACCAGGGCCACCTGGTCCTTGGTGCCTCCCGATGTTCCCTCGAACGT
CACTGTGAAGAACTCCGACGACGAGGTCTGGGTGTCGCTGTGGATTGGCC
TGTCCTCTACTGCGGGTGACTACGACGCCGATCTCTACCAGCCCCTGCTG
AACTGGTCTCCTGACAACGAGTCCCAGCTGGAACAACATCACCATCCACC
TCAGCGCTGCCGACGAGAACTTCGGTGACACTCTCTCCCTGTATAGCGGC
TCTGCCTCTAACGGCCTCACCACCTCCGACAAGGGCAAGACCTGGCACAC
CGATGCTATCAAGATCTCCAAGGACACTTTTGCCAATGTTGAGGCTTAAC
CCTCGACAACCCCCTCCTCTACCTCTACTCCGGAGACGAGTGCTACACCG
GCTCCGGTGACTGCGGTACTCTCCAATCCTACATCTACGTCGAAAACAAC
AAGGTGTACCAGGTCGTCACCATGAACGGCAAGACCGTCTCCAAGGAGAG
CGACGATGGTCAGAATGGCCAGGCCTACGTGACTGTTCCCGCGGACACCC
AGGTGGACTTTGAGGGGGATGCCCCGCTCCGGATGACGAGTGGTGTGTCG
CTGCGAGCACGTACACTCCTGATGCGCTACTCCTCCGTCGCCGTCCCTCT
GGCCTTTGCTGCCCGTGCCGCTGCCGTCACCAGTGATGCCTGGGCCTTCG
GGAACGGGTTCTACACCGGTCCCCCCACGAACGCGCACATCACCAGGGCC
ACCTGGTCCTTGGTGCCTCCCGATGTTCCCTCGAACGTCACTGTGAAGAA
CTCCGACGACGAGGTCTGGGTGTCGCTGTGGATTGGCCTGTCCTCTACTG
CGGGTGACTACGACGCCGATCTCTACCAGCCCCTGCTGAACTGGTCTCCT
GACAACGAGTCCCAGCTGGAACAACATCACCATCCACCTCAGCGCTGCCG
ACGAGAACTTCGGTGACACTCTCTCCCTGTATAGCGGCTCTGCCTCTAAC
GGCCTCACCACCTCCGACAAGGGCAAGACCTGGCACACCGATGCTATCAA
GATCTCCAAGGACACTTTTGCCAATGTTGAGGCTTAACCCTCGACAACCC
CCTCCTCTACCTCTACTCCGGAGACGAGTGCTACACCGGCTCCGGTGACT
GCGGTACTCTCCAATCCTACATCTACGTCGAAAACAACAAGGTGTACCAG
GTCGTCACCATGAACGGCAAGACCGTCTCCAAGGAGAGCGACGATGGTCA
GAATGGCCAGGCCTACGTGACTGTTCCCGCGGACACCCAGGTGGACTTTG
AGGGGGATGCCCCGCTCCGGATGACGAGTGGTGTGTCGCTGCGAGCACGT
ACACTCCTGATGCGCTACTCCTCCGTCGCCGTCCCTCTGGCCTTTGCTGC
CCGTGCCGCTGCCGTCACCAGTGATGCCTGGGCCTTCGGGAACGGGTTCT
ACACCGGTCCCCCCACGAACGCGCACATCACCAGGGCCACCTGGTCCTTG
GTGCCTCCCGATGTTCCCTCGAACGTCACTGTGAAGAACTCCGACGACGA
GGTCTGGGTGTCGCTGTGGATTGGCCTGTCCTCTACTGCGGGTGACTACG
ACGCCGATCTCTACCAGCCCCTGCTGAACTGGTCTCCTGACAACGAGTCC
CAGCTGGAACAACATCACCATCCACCTCAGCGCTGCCGACGAGAACTTCG
GTGACACTCTCTCCCTGTATAGCGGCTCTGCCTCTAACGGCCTCACCACC
TCCGACAAGGGCAAGACCTGGCACACCGATGCTATCAAGATCTCCAAGGA
CACTTTTGCCAATGTTGAGGCTTAACCCTCGACAACCCCCTCCTCTACCT
CTACTCCGGAGACGAGTGCTACACCGGCTCCGGTGACTGCGGTACTCTCC
AATCCTACATCTACGTCGAAAACAACAAGGTGTACCAGGTCGTCACCATG
AACGGCAAGACCGTCTCCAAGGAGAGCGACGATGGTCAGAATGGCCAGGC
CTACGTGACTGTTCCCGCGGACACCCAGGTGGACTTTGAGGGGGATGCCC
CGCTCCGGATGACGAGTGGTGTGTCGCTGCGAGCACGTACACTCCTGATG
CGCTACTCCTCCGTCGCCGTCCCTCTGGCCTTTGCTGCCCGTGCCGCTGC
CGTCACCAGTGATGCCTGGGCCTTCGGGAACGGGTTCTACACCGGTCCCC
CCACGAACGCGCACATCACCAGGGCCACCTGGTCCTTGGTGCCTCCCGAT
GTTCCCTCGAACGTCACTGTGAAGAACTCCGACGACGAGGTCTGGGTGTC
GCTGTGGATTGGCCTGTCCTCTACTGCGGGTGACTACGACGCCGATCTCT
ACCAGCCCCTGCTGAACTGGTCTCCTGACAACGAGTCCCAGCTGGAACAA
CATCACCATCCACCTCAGCGCTGCCGACGAGAACTTCGGTGACACTCTCT
CCCTGTATAGCGGCTCTGCCTCTAACGGCCTCACCACCTCCGACAAGGGC
AAGACCTGGCACACCGATGCTATCAAGATCTCCAAGGACACTTTTGCCAA
TGTTGAGGCTTAACCCTCGACAACCCCCTCCTCTACCTCTACTCCGGAGA
CGAGTGCTACACCGGCTCCGGTGACTGCGGTACTCTCCAATCCTACATCT
ACGTCGAAAACAACAAGGTGTACCAGGTCGTCACCATGAACGGCAAGACC
GTCTCCAAGGAGAGCGACGATGGTCAGAATGGCCAGGCCTACGTGACTGT
TCCCGCGGACACCCAGGTGGACTTTGAGGGGGATGCCCCGCTCCGGATGA
CGAGTGGTGTGTCGCTGCGAGCACGTACACTCCTGATGCGCTACTCCTCC
GTCGCCGTCCCTCTGGCCTTTGCTGCCCGTGCCGCTGCCGTCACCAGTGA
TGCCTGGGCCTTCGGGAACGGGTTCTACACCGGTCCCCCCACGAACGCGC
ACATCACCAGGGCCACCTGGTCCTTGGTGCCTCCCGATGTTCCCTCGAAC
GTCACTGTGAAGAACTCCGACGACGAGGTCTGGGTGTCGCTGTGGATTGG
CCTGTCCTCTACTGCGGGTGACTACGACGCCGATCTCTACCAGCCCCTGC
TGAACTGGTCTCCTGACAACGAGTCCCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001671-T1.utr3p1 | KJC3_001671-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001671-T1.utr5p1 | KJC3_001671-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:347606..348763 - |
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