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KJC3_001680-T1, KJC3_001680-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001680-T1
Unique NameKJC3_001680-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:376035..378704-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001680-T1 ID=KJC3_001680-T1|Name=KJC3_001680-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2670bp|location=Sequence derived from alignment at ch2:376035..378704- (Aspergillus niger KJC3)
CTCTTTTCCAATCCTTTTTTTACCCGTGTTCTTGGCCGAACTTGGCCTCC
ACCTCTCATCCGGCCTTCTCTTGTGTGTGTCTCCACGCGGCACCGGGACA
ATCCCCCCCCTCCCTCTCTCTCTCTGATTCCCACGTACTACGTCGGTGCG
TAGGGTTTGATGCTTGGCCCATTTCCCCGCCTATTCATTCATCCATCATC
ATCATCATCATCATCATCACACACACACACACAACACACAGGGCAGAATC
GCCATCATGGTCTACTGCGGTCGCCCTTCCACAAGTTGCAATAATTGTCG
CGCCAAAAAGAGAAGAGTAAGTCATTCCCGTTTTGCGCCCCTTGACAAAT
CCCCGACAATCATTAGGATTGGAGCAGTGTAAACAAGACATTTTGGCCCA
TGTCTAACCTCCCAATCAACAACAGTGCGACAAAGCAGTCCCCGAATGCG
GCCAATGTTGGCGCACGGGTCAGAAATGCCCGGGATACAGAGATCCCTCC
AGCCTCATCTTTCGCGATGAGAGCACTCAAGTCATCAATCGCGCCCGCTC
AAAAGTCTCCAAGAGGACGTCGGCGACCACTCCAACCGACCGCCGCTCGG
TGGAACGCACAGCCTCACCACAGGCACAGATACAACTACAACAACAACTA
GAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACA
ACAAAACACTTCCGCACCAGACTATCCAACTAGCCGCCCCTCCGATGTTG
TCGACGAGACCATGCTGGACATGACCGACGTCGATGTTGGAGCCGGGATT
TTCGCCGGCGCCAGCTTCATGCCCGACTTAATGAGCTTCCCCGACCCTTT
CAACCCGGACGAGACGGGGCTCTTCTCCCTCCATCCGGATGTCTCGCCCA
GTGCCATGCCGGTATCGGGCGACGGGCCTGCATCCGCTGCTTCTGTTCCT
GCCTCCGTGTCTGGGCGTCGTTCGCGTGTCGGTGCTTCGAGCGTAGGCGG
CGATGATGTGGCTCTCGATCATTTTCCTGATGACGGCACCCACCGCGGCG
ACCGCCAACAGCTCGGACACAACGACTTCACCAGCAGTCAGCTCGAGGTC
ATCGCGCGCCCCATCTCCTTGCCTCTCGTCGTCATCGGTCTCGATTTCTT
CTTCTCTCACTACGTCGTTCCGCAGTCCGGTCCCTCCTCCGGCTTCTTGG
ACTACGCGCCGGCCATGCTAGCGCAAGACGACGGCGGCAATGACATGCTC
GAGGGTGCCATTCTGGCGCTCGGCTTCAGTGGGCTCGCTCGCACCACGAA
CCAGTCCGACCTGTTGACCCGGTCCATGATGATGTACACCCGCACCATGG
AGCGCGTCAATCTCGCCCTCGCCGACCCCCAGGCCGCCCGTCGCGACAGC
ACCATCGTCTCGGTCCTCGTCCTCGCCCTCTACGAGTTCAGCAGGGCCTC
TCTCGACGGCTGGAAGCACCACATTGAGGGGGCTACTTCGCTCCTCAACC
TGCGCGGCCGCTCCCAGTTCTCCACCCCGACCGGCCTGCAGATCTTCAAG
GATGTCTTCTCCCAGCTCCTCACCAACTGCATGCGCTCCGGCTCTCCTAT
GCCCTCGAGCCTACGCATGCTGCGCATCGAGGCCACTAATGCCCTCAGCA
TCTCGGATCCCTACTGGGTCGCCTGCAGCGGCATGGTCGAGCTTCTCGAT
CTCTATCAACACATTTCCCCGGGCGGCTACTCGTTCTTTCCCAACTCTTC
CGGCATCTCCTCCTCTTCCTCCTCCACCTCCTCCGCTCCCGCCGCCCCTT
CCGATTCCTCCAACTCCCCCTCTGCTGTCTCCGGTTCGTCCCCGGCCTCT
ACCTCCTCCATGGCCTCCGGTCCTCTCAAGGGTGCCAGCATGTCCATTGA
GTACCTCGAGCGCTACCTCTCGCAGGCGCTCGAGATTGACTACCGCCTCG
AAAGCACCTTCTCCAACTGCCCTACCGAGTGGCAGTTCACCACCCAATCC
AACTCGTCTAGCAACACCTATGATCCGACTCGCATCCAGCGCGACGTCCA
CCACATCTACCACGATGTCTGGATCGCCGACGTCTGGAACAGTATGCGCA
CCTGCCGCATCCTCGCCAACCACGCCATCAGCCACCTCCTCCTCCGTGGC
GCCAACACCGACAGCAATTGGTTCTTCGCCAACAACTACGCCGAGCGCCT
GCACCAGGCCACCCAAACCATCGTCCGCATGCGCGACGAGATGCTCGCCT
CCGTGCCCCAGCTCATGGGCTACGCCACCTCGCCGACACAGGAGCTGCAA
CTGCAGCAGCAACAGCAGAAGCAGCCGCCCGAGCGCGCCAAGAACATCGC
CGGCTCGGCCGTCGGCGGCTACTTTGCCTGCTGGGTTCTCCTCACCGTGG
GCTGCATGCACAACCTCGGCCACGAGACCCGTGCGTACACGGCCGCCCAA
TTGCGCCGAATCAGCTGCGAAGCAGGGCTTGCGCAGGCAGAGGATTTCGC
CAACTTTGTTCAATCGAGCAACCTCCGTCCACCATTAAGTGGATAGTATG
GCAGCATCATTCAATTGTACATATTTAATACAGCGATAATCTGCATATAG
AGCATACACTGTACATAGGGTTACACGGATATATATCCCCTTTCACTAAT
CAAAAGTTTAAAAATGCCTC
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Coding sequence (CDS) from alignment at ch2:376035..378704-

>KJC3_001680-T1 ID=KJC3_001680-T1|Name=KJC3_001680-T1|organism=Aspergillus niger KJC3|type=CDS|length=4362bp|location=Sequence derived from alignment at ch2:376035..378704- (Aspergillus niger KJC3)
TGCGACAAAGCAGTCCCCGAATGCGGCCAATGTTGGCGCACGGGTCAGAA
ATGCCCGGGATACAGAGATCCCTCCAGCCTCATCTTTCGCGATGAGAGCA
CTCAAGTCATCAATCGCGCCCGCTCAAAAGTCTCCAAGAGGACGTCGGCG
ACCACTCCAACCGACCGCCGCTCGGTGGAACGCACAGCCTCACCACAGGC
ACAGATACAACTACAACAACAACTAGAACAACAACAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAACAACAACAACAAAACACTTCCGCACCAGACTAT
CCAACTAGCCGCCCCTCCGATGTTGTCGACGAGACCATGCTGGACATGAC
CGACGTCGATGTTGGAGCCGGGATTTTCGCCGGCGCCAGCTTCATGCCCG
ACTTAATGAGCTTCCCCGACCCTTTCAACCCGGACGAGACGGGGCTCTTC
TCCCTCCATCCGGATGTCTCGCCCAGTGCCATGCCGGTATCGGGCGACGG
GCCTGCATCCGCTGCTTCTGTTCCTGCCTCCGTGTCTGGGCGTCGTTCGC
GTGTCGGTGCTTCGAGCGTAGGCGGCGATGATGTGGCTCTCGATCATTTT
CCTGATGACGGCACCCACCGCGGCGACCGCCAACAGCTCGGACACAACGA
CTTCACCAGCAGTCAGCTCGAGGTCATCGCGCGCCCCATCTCCTTGCCTC
TCGTCGTCATCGGTCTCGATTTCTTCTTCTCTCACTACGTCGTTCCGCAG
TCCGGTCCCTCCTCCGGCTTCTTGGACTACGCGCCGGCCATGCTAGCGCA
AGACGACGGCGGCAATGACATGCTCGAGGGTGCCATTCTGGCGCTCGGCT
TCAGTGGGCTCGCTCGCACCACGAACCAGTCCGACCTGTTGACCCGGTCC
ATGATGATGTACACCCGCACCATGGAGCGCGTCAATCTCGCCCTCGCCGA
CCCCCAGGCCGCCCGTCGCGACAGCACCATCGTCTCGGTCCTCGTCCTCG
CCCTCTACGAGTTCAGCAGGGCCTCTCTCGACGGCTGGAAGCACCACATT
GAGGGGGCTACTTCGCTCCTCAACCTGCGCGGCCGCTCCCAGTTCTCCAC
CCCGACCGGCCTGCAGATCTTCAAGGATGTCTTCTCCCAGCTCCTCACCA
ACTGCATGCGCTCCGGCTCTCCTATGCCCTCGAGCCTACGCATGCTGCGC
ATCGAGGCCACTAATGCCCTCAGCATCTCGGATCCCTACTGGGTCGCCTG
CAGCGGCATGGTCGAGCTTCTCGATCTCTATCAACACATTTCCCCGGGCG
GCTACTCGTTCTTTCCCAACTCTTCCGGCATCTCCTCCTCTTCCTCCTCC
ACCTCCTCCGCTCCCGCCGCCCCTTCCGATTCCTCCAACTCCCCCTCTGC
TGTCTCCGGTTCGTCCCCGGCCTCTACCTCCTCCATGGCCTCCGGTCCTC
TCAAGGGTGCCAGCATGTCCATTGAGTACCTCGAGCGCTACCTCTCGCAG
GCGCTCGAGATTGACTACCGCCTCGAAAGCACCTTCTCCAACTGCCCTAC
CGAGTGGCAGTTCACCACCCAATCCAACTCGTCTAGCAACACCTATGATC
CGACTCGCATCCAGCGCGACGTCCACCACATCTACCACGATGTCTGGATC
GCCGACGTCTGGAACAGTATGCGCACCTGCCGCATCCTCGCCAACCACGC
CATCAGCCACCTCCTCCTCCGTGGCGCCAACACCGACAGCAATTGGTTCT
TCGCCAACAACTACGCCGAGCGCCTGCACCAGGCCACCCAAACCATCGTC
CGCATGCGCGACGAGATGCTCGCCTCCGTGCCCCAGCTCATGGGCTACGC
CACCTCGCCGACACAGGAGCTGCAACTGCAGCAGCAACAGCAGAAGCAGC
CGCCCGAGCGCGCCAAGAACATCGCCGGCTCGGCCGTCGGCGGCTACTTT
GCCTGCTGGGTTCTCCTCACCGTGGGCTGCATGCACAACCTCGGCCACGA
GACCCGTGCGTACACGGCCGCCCAATTGCGCCGAATCAGCTGCGAAGCAG
GGCTTGCGCAGGCAGAGGATTTCGCCAACTTTGTTCAATCGAGCAACCTC
CGTCCACCATTAAGTGGATAGATGGTCTACTGCGGTCGCCCTTCCACAAG
TTGCAATAATTGTCGCGCCAAAAAGAGAAGATGCGACAAAGCAGTCCCCG
AATGCGGCCAATGTTGGCGCACGGGTCAGAAATGCCCGGGATACAGAGAT
CCCTCCAGCCTCATCTTTCGCGATGAGAGCACTCAAGTCATCAATCGCGC
CCGCTCAAAAGTCTCCAAGAGGACGTCGGCGACCACTCCAACCGACCGCC
GCTCGGTGGAACGCACAGCCTCACCACAGGCACAGATACAACTACAACAA
CAACTAGAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACA
ACAACAACAAAACACTTCCGCACCAGACTATCCAACTAGCCGCCCCTCCG
ATGTTGTCGACGAGACCATGCTGGACATGACCGACGTCGATGTTGGAGCC
GGGATTTTCGCCGGCGCCAGCTTCATGCCCGACTTAATGAGCTTCCCCGA
CCCTTTCAACCCGGACGAGACGGGGCTCTTCTCCCTCCATCCGGATGTCT
CGCCCAGTGCCATGCCGGTATCGGGCGACGGGCCTGCATCCGCTGCTTCT
GTTCCTGCCTCCGTGTCTGGGCGTCGTTCGCGTGTCGGTGCTTCGAGCGT
AGGCGGCGATGATGTGGCTCTCGATCATTTTCCTGATGACGGCACCCACC
GCGGCGACCGCCAACAGCTCGGACACAACGACTTCACCAGCAGTCAGCTC
GAGGTCATCGCGCGCCCCATCTCCTTGCCTCTCGTCGTCATCGGTCTCGA
TTTCTTCTTCTCTCACTACGTCGTTCCGCAGTCCGGTCCCTCCTCCGGCT
TCTTGGACTACGCGCCGGCCATGCTAGCGCAAGACGACGGCGGCAATGAC
ATGCTCGAGGGTGCCATTCTGGCGCTCGGCTTCAGTGGGCTCGCTCGCAC
CACGAACCAGTCCGACCTGTTGACCCGGTCCATGATGATGTACACCCGCA
CCATGGAGCGCGTCAATCTCGCCCTCGCCGACCCCCAGGCCGCCCGTCGC
GACAGCACCATCGTCTCGGTCCTCGTCCTCGCCCTCTACGAGTTCAGCAG
GGCCTCTCTCGACGGCTGGAAGCACCACATTGAGGGGGCTACTTCGCTCC
TCAACCTGCGCGGCCGCTCCCAGTTCTCCACCCCGACCGGCCTGCAGATC
TTCAAGGATGTCTTCTCCCAGCTCCTCACCAACTGCATGCGCTCCGGCTC
TCCTATGCCCTCGAGCCTACGCATGCTGCGCATCGAGGCCACTAATGCCC
TCAGCATCTCGGATCCCTACTGGGTCGCCTGCAGCGGCATGGTCGAGCTT
CTCGATCTCTATCAACACATTTCCCCGGGCGGCTACTCGTTCTTTCCCAA
CTCTTCCGGCATCTCCTCCTCTTCCTCCTCCACCTCCTCCGCTCCCGCCG
CCCCTTCCGATTCCTCCAACTCCCCCTCTGCTGTCTCCGGTTCGTCCCCG
GCCTCTACCTCCTCCATGGCCTCCGGTCCTCTCAAGGGTGCCAGCATGTC
CATTGAGTACCTCGAGCGCTACCTCTCGCAGGCGCTCGAGATTGACTACC
GCCTCGAAAGCACCTTCTCCAACTGCCCTACCGAGTGGCAGTTCACCACC
CAATCCAACTCGTCTAGCAACACCTATGATCCGACTCGCATCCAGCGCGA
CGTCCACCACATCTACCACGATGTCTGGATCGCCGACGTCTGGAACAGTA
TGCGCACCTGCCGCATCCTCGCCAACCACGCCATCAGCCACCTCCTCCTC
CGTGGCGCCAACACCGACAGCAATTGGTTCTTCGCCAACAACTACGCCGA
GCGCCTGCACCAGGCCACCCAAACCATCGTCCGCATGCGCGACGAGATGC
TCGCCTCCGTGCCCCAGCTCATGGGCTACGCCACCTCGCCGACACAGGAG
CTGCAACTGCAGCAGCAACAGCAGAAGCAGCCGCCCGAGCGCGCCAAGAA
CATCGCCGGCTCGGCCGTCGGCGGCTACTTTGCCTGCTGGGTTCTCCTCA
CCGTGGGCTGCATGCACAACCTCGGCCACGAGACCCGTGCGTACACGGCC
GCCCAATTGCGCCGAATCAGCTGCGAAGCAGGGCTTGCGCAGGCAGAGGA
TTTCGCCAACTTTGTTCAATCGAGCAACCTCCGTCCACCATTAAGTGGAT
AGATGGTCTACTGCGGTCGCCCTTCCACAAGTTGCAATAATTGTCGCGCC
AAAAAGAGAAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001680KJC3_001680Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001680-T1KJC3_001680-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001680-T1.cdsKJC3_001680-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001680-T1.utr3p1KJC3_001680-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001680-T1.exon2KJC3_001680-T1.exon2Aspergillus niger KJC3exon
KJC3_001680-T1.exon1KJC3_001680-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001680-T1.utr5p1KJC3_001680-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_2.2
NoteantiSMASH:Cluster_2.1
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:376035..378704 -
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