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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:385609..387805- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001682-T1 ID=KJC3_001682-T1|Name=KJC3_001682-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2197bp|location=Sequence derived from alignment at ch2:385609..387805- (Aspergillus niger KJC3)
GATGCGAAGCGATCATTGCTTTTTCTCTTCTTTATTTCTTACTTACATAT
GATTTTCTCTCTCTCTCTCTTTTTCTTGGCCATCATCAACAACTTCCTTT
ATCTTTACTTCGTATTCACACTCCCACCGTCCTCTAGTCCCAATTCCTTC
ACGAGACTAGCCCTATTTCTTTCCTTCTTGGCATCACTAGCACTGTATCC
ACTAGGTTTGGGGGCCACTGCAAGCCAAGCCCAGAGTTCTAGACGTGCTA
CGGAGCTCATTTACGATCCGACGCCAAGATCAACCGAGTACTGACTGGTG
TATCGCGATTCCCCAGCAAGGGAGATCAGCTCCAACATCATGTACGCGCG
GTCCGAGAAGTCGCCCATGTTTGGGCAAGACCGGAGGCACTCACAATCCC
AATACGAGCCACCTAGCTACCCGCCTCCTCAATACGATCAAGCCCAGTAC
GGCCGCCCTCAATCGGGAGGTCCTCAGTACGGGGCCTCTCCAGTGAGACA
ACCCCAGTACGGACAGCCTCCGTATGGACCTCCCCCAGCTGGACAGCCTC
ATTACGGACAGTCACAATATGGCCAACCCCAATATGGTCAACCTCAGTAT
GGACAGCCACAATATGGCCAAACACCTTACGGACAGCTTCAGCCCGGTCC
CAACCCCGTGTTTGGAGGGCAACCCACCCCAGACCCCAGGTACGACTCAC
AATCGGGGATGACCACCATGGGAGGGCCACTGCCTCTGCCCGTCGTGATC
CCGCAGCAGCGCCCAGGGTCTCAAGAGCGAGGCTTCATGGCCGCCTATGC
GCCAGCGCTGGACTCGTGCGGCATCGACCAAAAGACGTTCCTGCGCTTCA
TCGATGAGACGAACACAGCCTTAGAGGGCAACAAGTACCTCGCCGGCGTG
CAAGTCGTCTCTCTTGGCGTGGGCTTCACTCCCGAGGTCATCGTCATGGG
CGTCGCCGCCGCGGTGCAAGCGGGCGCCTGGATGGCCAACAAGGGCTACG
TCCGAGGAAAGTAAGTGCCAACAAGACCCCGGCTCTCCCCCTCAAGGCCA
ATGATGCTGATCGCTTCAGGACCAACAACGTCATGGACAAGTACAACCGC
GAGCTTTTCGCACCTCACGGTCTGTTCTGCATGATAATGAAACACGATCC
GGAGCTCAAGGAGCCCAAGAATCCCGGCCGTCTCAAGCAGCTTGCCTCGC
TGGCTGTCAACGGCTCGAGCAATGGCGGCGGCAGTGCATGGATGCGTAAC
CACATTTCCGGCTCGTCGCAGGGACCGGACGGTCTGCCTACGGCCGTCGC
CCCGCTTGTCTACATGGACAACCGCCGCCAACACAAGAACTACCTATCCG
ATTCTCCGCCGGAGTCACCCGCCTCCCAGAGCGGTGTCGTCCCCGCCGGA
GGCAAGACCTCCACCAAGGAAAAGGCCAAGAAGGCCTTTGACAACTTCAA
CGACTACCTCGACCGTCGCGCTCGCGCAAAATACGCCGCCGAGAACGGCA
CCGACGCGCTGAGCGGGCCGACTGGTCGTGGCTTCAGCAACCGGTACCTG
GACCCCAATCATCCGGCCGTCAACGGAGGTCTGATCGGCGTGCTGTCCGG
TGGCGTGTTGAGTCCGACCCCGGAGCAGCGTGCACAGAAGAAGGCTGCCA
GGATTGATGAGGAGGAGAGGAGAGTGCTTGACGAATACAACGACCGGAGG
GATCGCATCTTGAACGACCGACGCAGCCAATCCGAGACAGATCGGGAGTT
GAGGCGGTTGGAGAAGGACTACGAGCCTCGTCTGGAGCAGTTCCGCAAGA
GGAGAAGGGAGCTAGAAGGTGGTAAAAGATCCATCAAGAGCGTAAGTCCA
ACTCATGCTGATTTGGTGGTGTTTTGTCTGACCATGGCCTTTTGCAGAAC
ATTTTGTACCTGATGATCGTCAACCTTCCGTCAGACGCCACTCTTGCTGC
TGCTTCGTCGAAACTGGAGCACGAATATGGTCACAGTGTCATGACCGAGA
CGATGCCCCCTCCAGCGTACTAACCTTTCATTTCATGATACATGCAACAT
GTCTTTTTTGGCGGTTTACGTGGAATAGCGGATGTTATGCGGGATGATTT
TTTGATTTCTTTTGCATCATTTTGAAAGTTGAATGATCTTGTCCAATAGA
CTAAATACCCTAATCAGACAAAATGGACCCTTCAATGCCACGTCAAG back to topCoding sequence (CDS) from alignment at ch2:385609..387805- >KJC3_001682-T1 ID=KJC3_001682-T1|Name=KJC3_001682-T1|organism=Aspergillus niger KJC3|type=CDS|length=4707bp|location=Sequence derived from alignment at ch2:385609..387805- (Aspergillus niger KJC3)
AACATTTTGTACCTGATGATCGTCAACCTTCCGTCAGACGCCACTCTTGC
TGCTGCTTCGTCGAAACTGGAGCACGAATATGGTCACAGTGTCATGACCG
AGACGATGCCCCCTCCAGCGTACTAAGACCAACAACGTCATGGACAAGTA
CAACCGCGAGCTTTTCGCACCTCACGGTCTGTTCTGCATGATAATGAAAC
ACGATCCGGAGCTCAAGGAGCCCAAGAATCCCGGCCGTCTCAAGCAGCTT
GCCTCGCTGGCTGTCAACGGCTCGAGCAATGGCGGCGGCAGTGCATGGAT
GCGTAACCACATTTCCGGCTCGTCGCAGGGACCGGACGGTCTGCCTACGG
CCGTCGCCCCGCTTGTCTACATGGACAACCGCCGCCAACACAAGAACTAC
CTATCCGATTCTCCGCCGGAGTCACCCGCCTCCCAGAGCGGTGTCGTCCC
CGCCGGAGGCAAGACCTCCACCAAGGAAAAGGCCAAGAAGGCCTTTGACA
ACTTCAACGACTACCTCGACCGTCGCGCTCGCGCAAAATACGCCGCCGAG
AACGGCACCGACGCGCTGAGCGGGCCGACTGGTCGTGGCTTCAGCAACCG
GTACCTGGACCCCAATCATCCGGCCGTCAACGGAGGTCTGATCGGCGTGC
TGTCCGGTGGCGTGTTGAGTCCGACCCCGGAGCAGCGTGCACAGAAGAAG
GCTGCCAGGATTGATGAGGAGGAGAGGAGAGTGCTTGACGAATACAACGA
CCGGAGGGATCGCATCTTGAACGACCGACGCAGCCAATCCGAGACAGATC
GGGAGTTGAGGCGGTTGGAGAAGGACTACGAGCCTCGTCTGGAGCAGTTC
CGCAAGAGGAGAAGGGAGCTAGAAGGTGGTAAAAGATCCATCAAGAGCAT
GTACGCGCGGTCCGAGAAGTCGCCCATGTTTGGGCAAGACCGGAGGCACT
CACAATCCCAATACGAGCCACCTAGCTACCCGCCTCCTCAATACGATCAA
GCCCAGTACGGCCGCCCTCAATCGGGAGGTCCTCAGTACGGGGCCTCTCC
AGTGAGACAACCCCAGTACGGACAGCCTCCGTATGGACCTCCCCCAGCTG
GACAGCCTCATTACGGACAGTCACAATATGGCCAACCCCAATATGGTCAA
CCTCAGTATGGACAGCCACAATATGGCCAAACACCTTACGGACAGCTTCA
GCCCGGTCCCAACCCCGTGTTTGGAGGGCAACCCACCCCAGACCCCAGGT
ACGACTCACAATCGGGGATGACCACCATGGGAGGGCCACTGCCTCTGCCC
GTCGTGATCCCGCAGCAGCGCCCAGGGTCTCAAGAGCGAGGCTTCATGGC
CGCCTATGCGCCAGCGCTGGACTCGTGCGGCATCGACCAAAAGACGTTCC
TGCGCTTCATCGATGAGACGAACACAGCCTTAGAGGGCAACAAGTACCTC
GCCGGCGTGCAAGTCGTCTCTCTTGGCGTGGGCTTCACTCCCGAGGTCAT
CGTCATGGGCGTCGCCGCCGCGGTGCAAGCGGGCGCCTGGATGGCCAACA
AGGGCTACGTCCGAGGAAAAACATTTTGTACCTGATGATCGTCAACCTTC
CGTCAGACGCCACTCTTGCTGCTGCTTCGTCGAAACTGGAGCACGAATAT
GGTCACAGTGTCATGACCGAGACGATGCCCCCTCCAGCGTACTAAGACCA
ACAACGTCATGGACAAGTACAACCGCGAGCTTTTCGCACCTCACGGTCTG
TTCTGCATGATAATGAAACACGATCCGGAGCTCAAGGAGCCCAAGAATCC
CGGCCGTCTCAAGCAGCTTGCCTCGCTGGCTGTCAACGGCTCGAGCAATG
GCGGCGGCAGTGCATGGATGCGTAACCACATTTCCGGCTCGTCGCAGGGA
CCGGACGGTCTGCCTACGGCCGTCGCCCCGCTTGTCTACATGGACAACCG
CCGCCAACACAAGAACTACCTATCCGATTCTCCGCCGGAGTCACCCGCCT
CCCAGAGCGGTGTCGTCCCCGCCGGAGGCAAGACCTCCACCAAGGAAAAG
GCCAAGAAGGCCTTTGACAACTTCAACGACTACCTCGACCGTCGCGCTCG
CGCAAAATACGCCGCCGAGAACGGCACCGACGCGCTGAGCGGGCCGACTG
GTCGTGGCTTCAGCAACCGGTACCTGGACCCCAATCATCCGGCCGTCAAC
GGAGGTCTGATCGGCGTGCTGTCCGGTGGCGTGTTGAGTCCGACCCCGGA
GCAGCGTGCACAGAAGAAGGCTGCCAGGATTGATGAGGAGGAGAGGAGAG
TGCTTGACGAATACAACGACCGGAGGGATCGCATCTTGAACGACCGACGC
AGCCAATCCGAGACAGATCGGGAGTTGAGGCGGTTGGAGAAGGACTACGA
GCCTCGTCTGGAGCAGTTCCGCAAGAGGAGAAGGGAGCTAGAAGGTGGTA
AAAGATCCATCAAGAGCATGTACGCGCGGTCCGAGAAGTCGCCCATGTTT
GGGCAAGACCGGAGGCACTCACAATCCCAATACGAGCCACCTAGCTACCC
GCCTCCTCAATACGATCAAGCCCAGTACGGCCGCCCTCAATCGGGAGGTC
CTCAGTACGGGGCCTCTCCAGTGAGACAACCCCAGTACGGACAGCCTCCG
TATGGACCTCCCCCAGCTGGACAGCCTCATTACGGACAGTCACAATATGG
CCAACCCCAATATGGTCAACCTCAGTATGGACAGCCACAATATGGCCAAA
CACCTTACGGACAGCTTCAGCCCGGTCCCAACCCCGTGTTTGGAGGGCAA
CCCACCCCAGACCCCAGGTACGACTCACAATCGGGGATGACCACCATGGG
AGGGCCACTGCCTCTGCCCGTCGTGATCCCGCAGCAGCGCCCAGGGTCTC
AAGAGCGAGGCTTCATGGCCGCCTATGCGCCAGCGCTGGACTCGTGCGGC
ATCGACCAAAAGACGTTCCTGCGCTTCATCGATGAGACGAACACAGCCTT
AGAGGGCAACAAGTACCTCGCCGGCGTGCAAGTCGTCTCTCTTGGCGTGG
GCTTCACTCCCGAGGTCATCGTCATGGGCGTCGCCGCCGCGGTGCAAGCG
GGCGCCTGGATGGCCAACAAGGGCTACGTCCGAGGAAAAACATTTTGTAC
CTGATGATCGTCAACCTTCCGTCAGACGCCACTCTTGCTGCTGCTTCGTC
GAAACTGGAGCACGAATATGGTCACAGTGTCATGACCGAGACGATGCCCC
CTCCAGCGTACTAAGACCAACAACGTCATGGACAAGTACAACCGCGAGCT
TTTCGCACCTCACGGTCTGTTCTGCATGATAATGAAACACGATCCGGAGC
TCAAGGAGCCCAAGAATCCCGGCCGTCTCAAGCAGCTTGCCTCGCTGGCT
GTCAACGGCTCGAGCAATGGCGGCGGCAGTGCATGGATGCGTAACCACAT
TTCCGGCTCGTCGCAGGGACCGGACGGTCTGCCTACGGCCGTCGCCCCGC
TTGTCTACATGGACAACCGCCGCCAACACAAGAACTACCTATCCGATTCT
CCGCCGGAGTCACCCGCCTCCCAGAGCGGTGTCGTCCCCGCCGGAGGCAA
GACCTCCACCAAGGAAAAGGCCAAGAAGGCCTTTGACAACTTCAACGACT
ACCTCGACCGTCGCGCTCGCGCAAAATACGCCGCCGAGAACGGCACCGAC
GCGCTGAGCGGGCCGACTGGTCGTGGCTTCAGCAACCGGTACCTGGACCC
CAATCATCCGGCCGTCAACGGAGGTCTGATCGGCGTGCTGTCCGGTGGCG
TGTTGAGTCCGACCCCGGAGCAGCGTGCACAGAAGAAGGCTGCCAGGATT
GATGAGGAGGAGAGGAGAGTGCTTGACGAATACAACGACCGGAGGGATCG
CATCTTGAACGACCGACGCAGCCAATCCGAGACAGATCGGGAGTTGAGGC
GGTTGGAGAAGGACTACGAGCCTCGTCTGGAGCAGTTCCGCAAGAGGAGA
AGGGAGCTAGAAGGTGGTAAAAGATCCATCAAGAGCATGTACGCGCGGTC
CGAGAAGTCGCCCATGTTTGGGCAAGACCGGAGGCACTCACAATCCCAAT
ACGAGCCACCTAGCTACCCGCCTCCTCAATACGATCAAGCCCAGTACGGC
CGCCCTCAATCGGGAGGTCCTCAGTACGGGGCCTCTCCAGTGAGACAACC
CCAGTACGGACAGCCTCCGTATGGACCTCCCCCAGCTGGACAGCCTCATT
ACGGACAGTCACAATATGGCCAACCCCAATATGGTCAACCTCAGTATGGA
CAGCCACAATATGGCCAAACACCTTACGGACAGCTTCAGCCCGGTCCCAA
CCCCGTGTTTGGAGGGCAACCCACCCCAGACCCCAGGTACGACTCACAAT
CGGGGATGACCACCATGGGAGGGCCACTGCCTCTGCCCGTCGTGATCCCG
CAGCAGCGCCCAGGGTCTCAAGAGCGAGGCTTCATGGCCGCCTATGCGCC
AGCGCTGGACTCGTGCGGCATCGACCAAAAGACGTTCCTGCGCTTCATCG
ATGAGACGAACACAGCCTTAGAGGGCAACAAGTACCTCGCCGGCGTGCAA
GTCGTCTCTCTTGGCGTGGGCTTCACTCCCGAGGTCATCGTCATGGGCGT
CGCCGCCGCGGTGCAAGCGGGCGCCTGGATGGCCAACAAGGGCTACGTCC
GAGGAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001682-T1.utr3p1 | KJC3_001682-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001682-T1.utr5p1 | KJC3_001682-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.2 |
| Note | antiSMASH:Cluster_2.1 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:385609..387805 - |
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