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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:427823..431658+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001691-T3 ID=KJC3_001691-T3|Name=KJC3_001691-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3836bp|location=Sequence derived from alignment at ch2:427823..431658+ (Aspergillus niger KJC3)
CTTGACAGCACCAGAAACTACGCTGAACCACATTAGGCGCGAAGCTGCCT
AAGCTTTGGCTCTAGCTTATTCAAGCTCGTGCCCAGTTTGGCAAGCATTA
CCATATGCGCTTAACCTTGTCTCTTCTTGAATGATTGACGCAATCCCTAG
GACTTTAGTTCTATTTGACGAAAAAGAGGGAACGCTAGGAAAGGAACTGG
CTCCTCTGCTAGTGAGCGTCAAGCGCTAGCTTGAGATTTTAGCTTCAGCG
TACACTCCGCCGTTCATCCCGAAAGGAACAGGCAGACCAAACGCTCTTTG
GCATTTGTCATGACCAGGCCACATACTCTGCCAATTTCCGACGATACAAA
ATAATGACCAGGCAGAAATACAGCGAATACATATGGTGCGGCACGGTACC
CCTTACACTGGCTCCCTTGGCTGCGAGTGTGTGAAGCAGAAGATGGCACA
CATCATGGTCCCTCACTTCTGGACAACAGAGCGGGGAATGAATGGCCTTT
CTGCCCATTAGTTGCTTTGATACACGACTGGTGTCGGTAAATTGCTCGAC
TCAGTCAGTCTGCCTTTCACATAACGAATACTACGGAGTCCGTGAAACCC
CTCCGTCGAACGAGCCCATATGGGGCAAGGAAATCAACCTTTTCCAGCGA
GGAATATTGAGTCCCAAAGGATTGACTGACATTGTTTCGGACATGCGAAC
AGTAGTAATAGTACACTATCATTACTCACCTTGTGAATCGGGCAGATCGG
CCACATACAAGGTTCGGGATACTAGTTGACGGAAGGGTCAGCGCCAAAGC
ACAAGGACCAACATCAGCTTTATCGACTGTCGGGACATTTGAAGGCTATA
TGAAGAAGTGGATTATATCTCTGGCTGCGATGACAGACCCACTGTTCCCA
GATGCTTTTAGCCACTTCTATCATGGATGCTGGTCTTGCATTGGGTACGC
GGAGTGTGATAAGGGCACCAGCCAATAACCTCCCGGTTGATCCATGCTAG
TCCCCGAAGAGTTTGCTACTAGGCAATTAGAGGAAGGCCGAACACAGCCC
AAGAAAATGCAAGGGATCACAGGCCACCAGCGCTGATCCGCCATCTGGCC
TGTGTTTAGTTTTTCCGACCGCGATCTTCCCTCTCAATCTCGGCATGCGC
GGCTTATCCTGGTGAGTTGAGCCCCGTGGCTATTCAACCCCCACTTCGGG
CTCATTGCAAATCTCTTATTCTTAATTCGTCGTCATGGTTATGCAGATAC
TGCCGGCCTTCATATTCAGCTCCAGGTGAATGACCTGTCAGCCCGCCCAT
ATCTTGGGTAGACCATGGCTTGTTCTGCATTTAACTCGTGGGGCGCCCTT
GACTATCCCCTCGCGTGCGTACACTGCTTAAGTGGATGCTGTGGATTGTC
TAGTCTGAGAATACATGGAACCCTTAAAATCCTCTGAATACGGGTCCTTT
CGGACTCATGTACATCCTGCAAAATATGGAGCATGGCGGAATGTACTCCA
TGGCATGGGAATCGCTGTAGTAGCTTTGGCGGGTCTTGCGTGGTGGACGC
CACGTCTCTATCCTGGAGCGCATACTGAGATTATCATCCAGTCGGAGTTT
AGCTGGGATCAGGTGAGAGACTTTGCATTTGTCGCCAGAGGTGTCTAACC
GGTAAAGATAACTCCTTCGCAATCACTTGTGTACCATGACTGCTTCGATG
GGTTCCAATGCGCCCGTCTTGAAGTCCCCATGGACTACAACCGATCTGAT
GGTCAAGGACGGCGCTTCGCGATCGCCATTACTCGTCTTCCCGCCAAGGT
TCCGGTGACAGATTCCCGCTATGGTGGCGCGGTTTTGACAAACCCAGGTA
CGGTTCAAGATTTCTATGTCATTTTGCCCTTACTAATTGCGTCTCAGGTG
GCCCGGGTGGCTCAGGCGTCGCGCAGGTGCTTGTCAGCGGCAAAGCCCTG
CAAAAGACCGTAGACTCGGAGAATGACCCAGGTATTGTCGATCCAGAAAG
CGCTTCGCGGGACAAGTATTTTGACATCATCGGATTTGATCCCCGGGGGG
TCAACAACACGACTCCAGGGTTCAGCTGCTTCCCCCATCTCTTCGCTCAG
CGAAACTGGGAACTGCAAGTGGCAGCCGAAGGCACACTCGGTAGCGCAGA
GGACGCATTCTGGCATAACTGGGCTCGCTCGACTGCCCTCAATACTGGAT
GCGCTGCCAATTTGTCCACTCCTCCGAGAGATGGAGAGGAGGCTTTGGGC
GAACATCTCAACACGCCCCCTGTGGCTAGAGATATGCTAGAGATCGTTGA
ACGACACGGTGAATGGCGTGCAGAGCAAGGATTGCTGGAGCAACGCCAAC
AGGACCATATGCATGGCTATGATCCGGGACAGAGTATAGTAGCGCGAACA
CGATGGCAGCAGGGACGGGAGAAGCTCCTGTACTGGGGTCGGTCGTATGG
AACCGTTCTAGGTTCCACGTTTGCAACTATGTTTCCCGATCGTATTCATC
GTGCTGTGCTTGATGCTGTGGTAGATGCCGATAAGTACTACTTCGGGGAA
GGGCCCAATGCTGTCGAAGACGCTGACGCCATTTTCGACCAATTCACGCG
ATACTGTCATGCGGCTGGAGGGGATGTCTGCCCCTTCTATGTCCAAGGCG
GACCGGCTGCCATCAAGAAAGCGTATTTGGCACTGGAAGAGGCTCTCTAC
AATCGCTCATTACCGGTTCCCGCATCAGCCACACGAGGTCCGGAAGTCGT
GACATGGAGTGATCTGAAGATCATCTTGCGAATCGCTTTGTATCAACCAC
TTTACGGATTTCCTCAGCTGGCAGAAATAGCGACCGAATTATCTCTGGGC
AGTGGTGCCGCCCTTGCCGACTTCAAAGTTGGAGGCCGCTCCCCATCATG
CCCTTCCGATCAATGCCTTCAAGCTGGGCCGTGGTCTGCTGAGTGTCAAG
TGTCCGGGCACAATGAGGCGTATTCGAGCACAGCCATTCTTTGTGCCGAT
GCGGAGTATTTGCAGGATGCCGACGAAGAAGAGTTCAAGCGCTCCTGGGC
GTCGTTGCAGGAAGATAGTGCCATGCTTGGGGATTACTGGGCCAGTCTTC
TGATGAGCTGCGTAGGGTGGAAGCTCAAGCCGAAGTGGAAGCTTACAGGT
AGTGTCTCATTGATCTGGATCGTTCATTGCTGATGTTTCCAGGCCCATTT
GCAGCCAACACCTCCCATCCACTGCTGTTTGTGAGCAATACGCTCGACCC
AGTGACGCCTCTGCGCAGGTAATTTCCATATTTTCTCAGCAACCTGTCAT
CAGGGCTAATCTTTTGCAGTGCGCGCAAAATGTCCGAAAACTTCCCCGGC
TCGGTGCTTCTGCAGCAGGATTCCGAAGGCGTAAGTGACCTCACATGTCG
AGCCTGATCAGGCGATCTGACTTTCTAGCACTCAACATTGGCGGCACCGT
CCGTGTGTGTTCATAAGAAGATCCGACAATATTTTCAGACAGGCGAGCTT
CCGCCTTCTGGTGTAGTATGCAAAGCAGACGTTAAGCCCATACTGGGAGC
GTCGCCTTCGACACAAGAGGGGGGGATGAGTGCCGAGGACCAGAAGCTGT
ATAAGGCACTGATGGAGGACGCGCAGCGAGTGGCAATAGCCCGGCTACCA
CTGTAGACTTGGCATCACGGTGTCAATGTGTCTGTTTTCTCGCGCGACTT
GTCTATCCAACACCCGGCTCCGAGTGTATATACCAGTAGAACATCCTCCA
GCAGGGTAGTGAATAGATATTTCCACCGGCTGTATGACCGATCACATCTA
TAGATCCATCGCAAACCAGGTGTTTCCAAATCCAGG back to topCoding sequence (CDS) from alignment at ch2:427823..431658+ >KJC3_001691-T3 ID=KJC3_001691-T3|Name=KJC3_001691-T3|organism=Aspergillus niger KJC3|type=CDS|length=5022bp|location=Sequence derived from alignment at ch2:427823..431658+ (Aspergillus niger KJC3)
ATGGAACCCTTAAAATCCTCTGAATACGGGTCCTTTCGGACTCATGTACA
TCCTGCAAAATATGGAGCATGGCGGAATGTACTCCATGGCATGGGAATCG
CTGTAGTAGCTTTGGCGGGTCTTGCGTGGTGGACGCCACGTCTCTATCCT
GGAGCGCATACTGAGATTATCATCCAGTCGGAGTTTAGCTGGGATCAGAT
AACTCCTTCGCAATCACTTGTGTACCATGACTGCTTCGATGGGTTCCAAT
GCGCCCGTCTTGAAGTCCCCATGGACTACAACCGATCTGATGGTCAAGGA
CGGCGCTTCGCGATCGCCATTACTCGTCTTCCCGCCAAGGTTCCGGTGAC
AGATTCCCGCTATGGTGGCGCGGTTTTGACAAACCCAGGTGGCCCGGGTG
GCTCAGGCGTCGCGCAGGTGCTTGTCAGCGGCAAAGCCCTGCAAAAGACC
GTAGACTCGGAGAATGACCCAGGTATTGTCGATCCAGAAAGCGCTTCGCG
GGACAAGTATTTTGACATCATCGGATTTGATCCCCGGGGGGTCAACAACA
CGACTCCAGGGTTCAGCTGCTTCCCCCATCTCTTCGCTCAGCGAAACTGG
GAACTGCAAGTGGCAGCCGAAGGCACACTCGGTAGCGCAGAGGACGCATT
CTGGCATAACTGGGCTCGCTCGACTGCCCTCAATACTGGATGCGCTGCCA
ATTTGTCCACTCCTCCGAGAGATGGAGAGGAGGCTTTGGGCGAACATCTC
AACACGCCCCCTGTGGCTAGAGATATGCTAGAGATCGTTGAACGACACGG
TGAATGGCGTGCAGAGCAAGGATTGCTGGAGCAACGCCAACAGGACCATA
TGCATGGCTATGATCCGGGACAGAGTATAGTAGCGCGAACACGATGGCAG
CAGGGACGGGAGAAGCTCCTGTACTGGGGTCGGTCGTATGGAACCGTTCT
AGGTTCCACGTTTGCAACTATGTTTCCCGATCGTATTCATCGTGCTGTGC
TTGATGCTGTGGTAGATGCCGATAAGTACTACTTCGGGGAAGGGCCCAAT
GCTGTCGAAGACGCTGACGCCATTTTCGACCAATTCACGCGATACTGTCA
TGCGGCTGGAGGGGATGTCTGCCCCTTCTATGTCCAAGGCGGACCGGCTG
CCATCAAGAAAGCGTATTTGGCACTGGAAGAGGCTCTCTACAATCGCTCA
TTACCGGTTCCCGCATCAGCCACACGAGGTCCGGAAGTCGTGACATGGAG
TGATCTGAAGATCATCTTGCGAATCGCTTTGTATCAACCACTTTACGGAT
TTCCTCAGCTGGCAGAAATAGCGACCGAATTATCTCTGGGCAGTGGTGCC
GCCCTTGCCGACTTCAAAGTTGGAGGCCGCTCCCCATCATGCCCTTCCGA
TCAATGCCTTCAAGCTGGGCCGTGGTCTGCTGAGTGTCAAGTGTCCGGGC
ACAATGAGGCGTATTCGAGCACAGCCATTCTTTGTGCCGATGCGGAGTAT
TTGCAGGATGCCGACGAAGAAGAGTTCAAGCGCTCCTGGGCGTCGTTGCA
GGAAGATAGTGCCATGCTTGGGGATTACTGGGCCAGTCTTCTGATGAGCT
GCGTAGGGTGGAAGCTCAAGCCGAAGTGGAAGCTTACAGGTAGTGTCTCA
TTGATCTGGATCGTTCATTGCTGAATGGAACCCTTAAAATCCTCTGAATA
CGGGTCCTTTCGGACTCATGTACATCCTGCAAAATATGGAGCATGGCGGA
ATGTACTCCATGGCATGGGAATCGCTGTAGTAGCTTTGGCGGGTCTTGCG
TGGTGGACGCCACGTCTCTATCCTGGAGCGCATACTGAGATTATCATCCA
GTCGGAGTTTAGCTGGGATCAGATAACTCCTTCGCAATCACTTGTGTACC
ATGACTGCTTCGATGGGTTCCAATGCGCCCGTCTTGAAGTCCCCATGGAC
TACAACCGATCTGATGGTCAAGGACGGCGCTTCGCGATCGCCATTACTCG
TCTTCCCGCCAAGGTTCCGGTGACAGATTCCCGCTATGGTGGCGCGGTTT
TGACAAACCCAGGTGGCCCGGGTGGCTCAGGCGTCGCGCAGGTGCTTGTC
AGCGGCAAAGCCCTGCAAAAGACCGTAGACTCGGAGAATGACCCAGGTAT
TGTCGATCCAGAAAGCGCTTCGCGGGACAAGTATTTTGACATCATCGGAT
TTGATCCCCGGGGGGTCAACAACACGACTCCAGGGTTCAGCTGCTTCCCC
CATCTCTTCGCTCAGCGAAACTGGGAACTGCAAGTGGCAGCCGAAGGCAC
ACTCGGTAGCGCAGAGGACGCATTCTGGCATAACTGGGCTCGCTCGACTG
CCCTCAATACTGGATGCGCTGCCAATTTGTCCACTCCTCCGAGAGATGGA
GAGGAGGCTTTGGGCGAACATCTCAACACGCCCCCTGTGGCTAGAGATAT
GCTAGAGATCGTTGAACGACACGGTGAATGGCGTGCAGAGCAAGGATTGC
TGGAGCAACGCCAACAGGACCATATGCATGGCTATGATCCGGGACAGAGT
ATAGTAGCGCGAACACGATGGCAGCAGGGACGGGAGAAGCTCCTGTACTG
GGGTCGGTCGTATGGAACCGTTCTAGGTTCCACGTTTGCAACTATGTTTC
CCGATCGTATTCATCGTGCTGTGCTTGATGCTGTGGTAGATGCCGATAAG
TACTACTTCGGGGAAGGGCCCAATGCTGTCGAAGACGCTGACGCCATTTT
CGACCAATTCACGCGATACTGTCATGCGGCTGGAGGGGATGTCTGCCCCT
TCTATGTCCAAGGCGGACCGGCTGCCATCAAGAAAGCGTATTTGGCACTG
GAAGAGGCTCTCTACAATCGCTCATTACCGGTTCCCGCATCAGCCACACG
AGGTCCGGAAGTCGTGACATGGAGTGATCTGAAGATCATCTTGCGAATCG
CTTTGTATCAACCACTTTACGGATTTCCTCAGCTGGCAGAAATAGCGACC
GAATTATCTCTGGGCAGTGGTGCCGCCCTTGCCGACTTCAAAGTTGGAGG
CCGCTCCCCATCATGCCCTTCCGATCAATGCCTTCAAGCTGGGCCGTGGT
CTGCTGAGTGTCAAGTGTCCGGGCACAATGAGGCGTATTCGAGCACAGCC
ATTCTTTGTGCCGATGCGGAGTATTTGCAGGATGCCGACGAAGAAGAGTT
CAAGCGCTCCTGGGCGTCGTTGCAGGAAGATAGTGCCATGCTTGGGGATT
ACTGGGCCAGTCTTCTGATGAGCTGCGTAGGGTGGAAGCTCAAGCCGAAG
TGGAAGCTTACAGGTAGTGTCTCATTGATCTGGATCGTTCATTGCTGAAT
GGAACCCTTAAAATCCTCTGAATACGGGTCCTTTCGGACTCATGTACATC
CTGCAAAATATGGAGCATGGCGGAATGTACTCCATGGCATGGGAATCGCT
GTAGTAGCTTTGGCGGGTCTTGCGTGGTGGACGCCACGTCTCTATCCTGG
AGCGCATACTGAGATTATCATCCAGTCGGAGTTTAGCTGGGATCAGATAA
CTCCTTCGCAATCACTTGTGTACCATGACTGCTTCGATGGGTTCCAATGC
GCCCGTCTTGAAGTCCCCATGGACTACAACCGATCTGATGGTCAAGGACG
GCGCTTCGCGATCGCCATTACTCGTCTTCCCGCCAAGGTTCCGGTGACAG
ATTCCCGCTATGGTGGCGCGGTTTTGACAAACCCAGGTGGCCCGGGTGGC
TCAGGCGTCGCGCAGGTGCTTGTCAGCGGCAAAGCCCTGCAAAAGACCGT
AGACTCGGAGAATGACCCAGGTATTGTCGATCCAGAAAGCGCTTCGCGGG
ACAAGTATTTTGACATCATCGGATTTGATCCCCGGGGGGTCAACAACACG
ACTCCAGGGTTCAGCTGCTTCCCCCATCTCTTCGCTCAGCGAAACTGGGA
ACTGCAAGTGGCAGCCGAAGGCACACTCGGTAGCGCAGAGGACGCATTCT
GGCATAACTGGGCTCGCTCGACTGCCCTCAATACTGGATGCGCTGCCAAT
TTGTCCACTCCTCCGAGAGATGGAGAGGAGGCTTTGGGCGAACATCTCAA
CACGCCCCCTGTGGCTAGAGATATGCTAGAGATCGTTGAACGACACGGTG
AATGGCGTGCAGAGCAAGGATTGCTGGAGCAACGCCAACAGGACCATATG
CATGGCTATGATCCGGGACAGAGTATAGTAGCGCGAACACGATGGCAGCA
GGGACGGGAGAAGCTCCTGTACTGGGGTCGGTCGTATGGAACCGTTCTAG
GTTCCACGTTTGCAACTATGTTTCCCGATCGTATTCATCGTGCTGTGCTT
GATGCTGTGGTAGATGCCGATAAGTACTACTTCGGGGAAGGGCCCAATGC
TGTCGAAGACGCTGACGCCATTTTCGACCAATTCACGCGATACTGTCATG
CGGCTGGAGGGGATGTCTGCCCCTTCTATGTCCAAGGCGGACCGGCTGCC
ATCAAGAAAGCGTATTTGGCACTGGAAGAGGCTCTCTACAATCGCTCATT
ACCGGTTCCCGCATCAGCCACACGAGGTCCGGAAGTCGTGACATGGAGTG
ATCTGAAGATCATCTTGCGAATCGCTTTGTATCAACCACTTTACGGATTT
CCTCAGCTGGCAGAAATAGCGACCGAATTATCTCTGGGCAGTGGTGCCGC
CCTTGCCGACTTCAAAGTTGGAGGCCGCTCCCCATCATGCCCTTCCGATC
AATGCCTTCAAGCTGGGCCGTGGTCTGCTGAGTGTCAAGTGTCCGGGCAC
AATGAGGCGTATTCGAGCACAGCCATTCTTTGTGCCGATGCGGAGTATTT
GCAGGATGCCGACGAAGAAGAGTTCAAGCGCTCCTGGGCGTCGTTGCAGG
AAGATAGTGCCATGCTTGGGGATTACTGGGCCAGTCTTCTGATGAGCTGC
GTAGGGTGGAAGCTCAAGCCGAAGTGGAAGCTTACAGGTAGTGTCTCATT
GATCTGGATCGTTCATTGCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001691-T3.utr5p1 | KJC3_001691-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0004231 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF08386 |
| DBxref | PFAM:PF00561 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:427823..431658 + |
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