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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:436906..438102- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001695-T1 ID=KJC3_001695-T1|Name=KJC3_001695-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1197bp|location=Sequence derived from alignment at ch2:436906..438102- (Aspergillus niger KJC3)
TGTTCTTCACGGTACTTCTTGCTTGGGCTGCAGCAGCGAGGCCCTAAATT
ACTGACAACGCCACCCTCATCCCAGCCCATATGGAGAATATCCTATCACG
ACGAAGAGCGCCCAGTCTGCGGTAGATGTACCTGTGATGTACTCGATCGC
TTGGTCGGTATTGCATGCCGTACTTGGTGATAGCTCACGCCCGTTCCAGG
GGCGAGAGAGCGCCAACACCGGGCAGGCCCAACGATGAGCTCCAATCACC
ACCCTCCAGAATGTAACCTACGAGACACGGATCAACAAAGACAGGGATGA
CGAGAGGTCGAGCCAGCTGTTACTGTGTTGCAGCTTCTCATCTGGTGACT
ACCCCGCATCCGGGTTACGAGGAAGAGCATATAAACCTTGTGTCACCCGG
CCAGACAATGGAGGGTGATACCTTCAAACTCGCCTGTGTTCTCATCAATA
TCAGGATCAAGATCTTGTTCTCTCATTGTCTCTTGCTGTAACTACTTTTC
CACTCAAGACACTACAAGCATATCAACTATTCAAGATGTCGACCCCTGCT
ATCCAAGGTCTCTCGTCTGTGGGCTCGTCTGTCGGTGCTTACTCCAGACA
GCAGCTGGCCACTTTGAGAAACAGATTCTTGACTACAGGTAGGTCTTCCA
TCATTGCAGATGGAGTATGGTAAGAAGAAAAGCATCCTAATAGCCCATTT
AGAGAAGCGCAGGAGGAGGGCACAGCTCATCTCGACCTCGTTTAGCGTTC
ACAAGCCGGTCTGGATTGCTGCAGGGGGCGCAGCCTACACGACGATGGGC
GCGGTTTATCTGACGCTACGCTACATGCGTCGCTTGAAATAAATCCCCCC
TCTCCGTGAGCGAGCGAGTCTGGCTACCGCAAGCTATGCAACTGGAATAG
AGGAGGGGGATTTGTCTGAGACAGCGATCTACATCCTCATTATTATTACC
GACCATTCATTTCACATCATTTTCTTTATCTATTTTTTGGGGGGGATCAC
CCTCTGGGGTCAGGTACTTTGGACGGACGGGATGGGATATGCAACAAGGA
GGGATCATGACATGACGGAGTTTTACGCGTTTTGGGTTGCACTGGGCCAA
TATCATCATGTATTTAACAAACACACAAACATACACACACCAAGGAATGA
CCATAAATACAAGAACAAATACAACAGCTTGATGCATTATTAGTGAG back to topCoding sequence (CDS) from alignment at ch2:436906..438102- >KJC3_001695-T1 ID=KJC3_001695-T1|Name=KJC3_001695-T1|organism=Aspergillus niger KJC3|type=CDS|length=486bp|location=Sequence derived from alignment at ch2:436906..438102- (Aspergillus niger KJC3)
AGAAGCGCAGGAGGAGGGCACAGCTCATCTCGACCTCGTTTAGCGTTCAC
AAGCCGGTCTGGATTGCTGCAGGGGGCGCAGCCTACACGACGATGGGCGC
GGTTTATCTGACGCTACGCTACATGCGTCGCTTGAAATAAATGTCGACCC
CTGCTATCCAAGGTCTCTCGTCTGTGGGCTCGTCTGTCGGTGCTTACTCC
AGACAGCAGCTGGCCACTTTGAGAAACAGATTCTTGACTACAGAGAAGCG
CAGGAGGAGGGCACAGCTCATCTCGACCTCGTTTAGCGTTCACAAGCCGG
TCTGGATTGCTGCAGGGGGCGCAGCCTACACGACGATGGGCGCGGTTTAT
CTGACGCTACGCTACATGCGTCGCTTGAAATAAATGTCGACCCCTGCTAT
CCAAGGTCTCTCGTCTGTGGGCTCGTCTGTCGGTGCTTACTCCAGACAGC
AGCTGGCCACTTTGAGAAACAGATTCTTGACTACAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001695-T1.utr3p1 | KJC3_001695-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001695-T1.utr5p1 | KJC3_001695-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:436906..438102 - |
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