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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:473980..474863- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001710-T1 ID=KJC3_001710-T1|Name=KJC3_001710-T1|organism=Aspergillus niger KJC3|type=mRNA|length=884bp|location=Sequence derived from alignment at ch2:473980..474863- (Aspergillus niger KJC3)
ATGCATCTAACGTCTCTTCTCCTCCTTATCCCCGCCGTCGCAGCTAGCTG
CTTCCACAACACCCCTCTCGCCCGGCGTGCAACCGCCCCCAGCTTCGGGT
ATACTGCCACGCGAGGCCCATTGAACTGGTATGGGCTCGACCCGAATGCC
AATGCCGCTTGCGCAACAGGGACACACCAGTCCCCGATCATGATCGGCAG
CACTCAGATCTCGAAAGTCGATAACAGCACCATCACCCTCTTTATCCCTA
CGGTTTCCGATCTCGAGTTCGAGAACCTCGGCACCACTATCGAAGTGCCC
TTGACGAATGGCACGCTCGTCGTGAGGAACAATACTTACACCTTGGCTCA
GTTCCACTTCCATACCCCTTCCGAGCACCGTATCGATGAGGAGCATTTCC
CCATGGAAGCTCATTTTGTGTTTTCGGATGAGGGTACAGCATGAACCACC
TTCCTGCGCTCACTTTTCTTGATTGCTGATTTAGAACTCTAAACATAGAT
GGAAACATCGCCGTGGTGGGTTATCTCATCCAACTCACCTCCACAAAGGA
TCACAGCACACCCCTGCTGAACACCATATTCGAGAACGTCGATGAGATCT
CCGAGCCGGGAAGCTCCACCGAGCTCGGATTGCTGGACTTCAGTAGTGTC
ACGAGACATTTCTCGAACAACGATATCTACACATACTCTGGGTCGTTGAC
TACCCCGCCCTGCACCGAGGGTGTAGCGTGGTATGTCAGTGGTTTGCCGT
TGGTGTTGGATGTGGATACGTACAATCAAGTAAAGAAGGTGTTGAAGTTC
AATTCACGCTATACGCAGAACTTTTTGGGACAGGAAAATTTGTTGCAGCT
TGCGGCGGATGAGTTGAATGGTGTTGCTGCTTAG back to topCoding sequence (CDS) from alignment at ch2:473980..474863- >KJC3_001710-T1 ID=KJC3_001710-T1|Name=KJC3_001710-T1|organism=Aspergillus niger KJC3|type=CDS|length=1638bp|location=Sequence derived from alignment at ch2:473980..474863- (Aspergillus niger KJC3)
ATGGAAACATCGCCGTGGTGGGTTATCTCATCCAACTCACCTCCACAAAG
GATCACAGCACACCCCTGCTGAACACCATATTCGAGAACGTCGATGAGAT
CTCCGAGCCGGGAAGCTCCACCGAGCTCGGATTGCTGGACTTCAGTAGTG
TCACGAGACATTTCTCGAACAACGATATCTACACATACTCTGGGTCGTTG
ACTACCCCGCCCTGCACCGAGGGTGTAGCGTGGTATGTCAGTGGTTTGCC
GTTGGTGTTGGATGTGGATACGTACAATCAAGTAAAGAAGGTGTTGAAGT
TCAATTCACGCTATACGCAGAACTTTTTGGGACAGGAAAATTTGTTGCAG
CTTGCGGCGGATGAGTTGAATGGTGTTGCTGCTTAGATGCATCTAACGTC
TCTTCTCCTCCTTATCCCCGCCGTCGCAGCTAGCTGCTTCCACAACACCC
CTCTCGCCCGGCGTGCAACCGCCCCCAGCTTCGGGTATACTGCCACGCGA
GGCCCATTGAACTGGTATGGGCTCGACCCGAATGCCAATGCCGCTTGCGC
AACAGGGACACACCAGTCCCCGATCATGATCGGCAGCACTCAGATCTCGA
AAGTCGATAACAGCACCATCACCCTCTTTATCCCTACGGTTTCCGATCTC
GAGTTCGAGAACCTCGGCACCACTATCGAAGTGCCCTTGACGAATGGCAC
GCTCGTCGTGAGGAACAATACTTACACCTTGGCTCAGTTCCACTTCCATA
CCCCTTCCGAGCACCGTATCGATGAGGAGCATTTCCCCATGGAAGCTCAT
TTTGTGTTTTCGGATGAGGATGGAAACATCGCCGTGGTGGGTTATCTCAT
CCAACTCACCTCCACAAAGGATCACAGCACACCCCTGCTGAACACCATAT
TCGAGAACGTCGATGAGATCTCCGAGCCGGGAAGCTCCACCGAGCTCGGA
TTGCTGGACTTCAGTAGTGTCACGAGACATTTCTCGAACAACGATATCTA
CACATACTCTGGGTCGTTGACTACCCCGCCCTGCACCGAGGGTGTAGCGT
GGTATGTCAGTGGTTTGCCGTTGGTGTTGGATGTGGATACGTACAATCAA
GTAAAGAAGGTGTTGAAGTTCAATTCACGCTATACGCAGAACTTTTTGGG
ACAGGAAAATTTGTTGCAGCTTGCGGCGGATGAGTTGAATGGTGTTGCTG
CTTAGATGCATCTAACGTCTCTTCTCCTCCTTATCCCCGCCGTCGCAGCT
AGCTGCTTCCACAACACCCCTCTCGCCCGGCGTGCAACCGCCCCCAGCTT
CGGGTATACTGCCACGCGAGGCCCATTGAACTGGTATGGGCTCGACCCGA
ATGCCAATGCCGCTTGCGCAACAGGGACACACCAGTCCCCGATCATGATC
GGCAGCACTCAGATCTCGAAAGTCGATAACAGCACCATCACCCTCTTTAT
CCCTACGGTTTCCGATCTCGAGTTCGAGAACCTCGGCACCACTATCGAAG
TGCCCTTGACGAATGGCACGCTCGTCGTGAGGAACAATACTTACACCTTG
GCTCAGTTCCACTTCCATACCCCTTCCGAGCACCGTATCGATGAGGAGCA
TTTCCCCATGGAAGCTCATTTTGTGTTTTCGGATGAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004089 | carbonate dehydratase activity |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.4 |
| Note | antiSMASH:Cluster_2.3 |
| Note | SECRETED:SignalP(1-15) |
| DBxref | InterPro:IPR041891 |
| DBxref | InterPro:IPR018338 |
| DBxref | InterPro:IPR036398 |
| DBxref | InterPro:IPR001148 |
| DBxref | PFAM:PF00194 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:473980..474863 - |
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