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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:476244..477332- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001711-T1 ID=KJC3_001711-T1|Name=KJC3_001711-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1089bp|location=Sequence derived from alignment at ch2:476244..477332- (Aspergillus niger KJC3)
ATGAAGTCATACATGTTATGGGCATTAACTGCCCTTGCTGCCACAGTGCC
TCTCAGTGCAGCTCAGACATACACCGACTGCAACCCCTTGAACAGTAAGT
AAAGGCATATATTATCGGAGAGTAGAATAATTGACTCATATTCTTAGAAA
CCTGCACACCCGACAAGGGTCTCAACCAGTGGTCCCTGAGCACCAACTTC
ACTGATGGCTCGTCTTGGCGTGATAGATGGAATGTAACCGCCGATACCGT
GAACAGCACCTCCAAAGGTGCCGAGTTCAAGATCAGCCAGGAGGGCGATG
CCCCTACCATTGAGTCCAACTTCTACATCTTCTTCGGCTATGTGGAGGTC
AAATTTCGTGCTGCCAATGGTACCGGTATCATCAGCACCAGTGTGATGGA
GTCTGACGACCTGGATGAAATTGACTGGGTACGGTCCGCCCAAAATTCGT
AGTGATATTCATGCTAACCCCACACAGGAACAAGTCAGTACATATGACTC
GGAAATCCAAACAAATTACTTTGGCAAAGGCAACACCACGTCCTACGACC
GTGCCACCACCGTGAACGTCACCACACCCGAAGAGACCTACCACACCTAT
GGAGTCAACTGGACATCCAGCAAGACGGAGTGGATACTTGACGGCACTGT
CGTCCGTACGCTCGAGTATGCCGACGCTCTCAATGGCAAGAACTACCCCC
AGACCCCCATGACCATCCGTATCGGTATCTGGGCCGGTGGTGACCCCGAC
AATTCCGAGGGAACCATCGAATGGGCTGGTGGTGAGACCGACTACGACGA
CGGCCCGTTCATCATGTATTTGGAGTCGGTCAACATCATTAACTACACCC
CCGCTGAGTACTACAAGTACACGGACAAGACTGGCGACTACACAAGTATC
AAGGCCTACAACACCACCACATCGTCCAAGTCGACCAATTCGTCCAGTAG
CTCGTCCTCGTCCTCGGCCTCTTCCTCTTCAAGCTCGAGCTCCATCTCTA
CATCCAGCAGTGGTGCTAGTGGTCTATCCTACAGCGGGGTCTTGATGACG
ATCCTTGGGTTGGGCACATTCGCGGGATTGCTTCTTTAG back to topCoding sequence (CDS) from alignment at ch2:476244..477332- >KJC3_001711-T1 ID=KJC3_001711-T1|Name=KJC3_001711-T1|organism=Aspergillus niger KJC3|type=CDS|length=2961bp|location=Sequence derived from alignment at ch2:476244..477332- (Aspergillus niger KJC3)
GAACAAGTCAGTACATATGACTCGGAAATCCAAACAAATTACTTTGGCAA
AGGCAACACCACGTCCTACGACCGTGCCACCACCGTGAACGTCACCACAC
CCGAAGAGACCTACCACACCTATGGAGTCAACTGGACATCCAGCAAGACG
GAGTGGATACTTGACGGCACTGTCGTCCGTACGCTCGAGTATGCCGACGC
TCTCAATGGCAAGAACTACCCCCAGACCCCCATGACCATCCGTATCGGTA
TCTGGGCCGGTGGTGACCCCGACAATTCCGAGGGAACCATCGAATGGGCT
GGTGGTGAGACCGACTACGACGACGGCCCGTTCATCATGTATTTGGAGTC
GGTCAACATCATTAACTACACCCCCGCTGAGTACTACAAGTACACGGACA
AGACTGGCGACTACACAAGTATCAAGGCCTACAACACCACCACATCGTCC
AAGTCGACCAATTCGTCCAGTAGCTCGTCCTCGTCCTCGGCCTCTTCCTC
TTCAAGCTCGAGCTCCATCTCTACATCCAGCAGTGGTGCTAGTGGTCTAT
CCTACAGCGGGGTCTTGATGACGATCCTTGGGTTGGGCACATTCGCGGGA
TTGCTTCTTTAGAAACCTGCACACCCGACAAGGGTCTCAACCAGTGGTCC
CTGAGCACCAACTTCACTGATGGCTCGTCTTGGCGTGATAGATGGAATGT
AACCGCCGATACCGTGAACAGCACCTCCAAAGGTGCCGAGTTCAAGATCA
GCCAGGAGGGCGATGCCCCTACCATTGAGTCCAACTTCTACATCTTCTTC
GGCTATGTGGAGGTCAAATTTCGTGCTGCCAATGGTACCGGTATCATCAG
CACCAGTGTGATGGAGTCTGACGACCTGGATGAAATTGACTGGATGAAGT
CATACATGTTATGGGCATTAACTGCCCTTGCTGCCACAGTGCCTCTCAGT
GCAGCTCAGACATACACCGACTGCAACCCCTTGAACAGAACAAGTCAGTA
CATATGACTCGGAAATCCAAACAAATTACTTTGGCAAAGGCAACACCACG
TCCTACGACCGTGCCACCACCGTGAACGTCACCACACCCGAAGAGACCTA
CCACACCTATGGAGTCAACTGGACATCCAGCAAGACGGAGTGGATACTTG
ACGGCACTGTCGTCCGTACGCTCGAGTATGCCGACGCTCTCAATGGCAAG
AACTACCCCCAGACCCCCATGACCATCCGTATCGGTATCTGGGCCGGTGG
TGACCCCGACAATTCCGAGGGAACCATCGAATGGGCTGGTGGTGAGACCG
ACTACGACGACGGCCCGTTCATCATGTATTTGGAGTCGGTCAACATCATT
AACTACACCCCCGCTGAGTACTACAAGTACACGGACAAGACTGGCGACTA
CACAAGTATCAAGGCCTACAACACCACCACATCGTCCAAGTCGACCAATT
CGTCCAGTAGCTCGTCCTCGTCCTCGGCCTCTTCCTCTTCAAGCTCGAGC
TCCATCTCTACATCCAGCAGTGGTGCTAGTGGTCTATCCTACAGCGGGGT
CTTGATGACGATCCTTGGGTTGGGCACATTCGCGGGATTGCTTCTTTAGA
AACCTGCACACCCGACAAGGGTCTCAACCAGTGGTCCCTGAGCACCAACT
TCACTGATGGCTCGTCTTGGCGTGATAGATGGAATGTAACCGCCGATACC
GTGAACAGCACCTCCAAAGGTGCCGAGTTCAAGATCAGCCAGGAGGGCGA
TGCCCCTACCATTGAGTCCAACTTCTACATCTTCTTCGGCTATGTGGAGG
TCAAATTTCGTGCTGCCAATGGTACCGGTATCATCAGCACCAGTGTGATG
GAGTCTGACGACCTGGATGAAATTGACTGGATGAAGTCATACATGTTATG
GGCATTAACTGCCCTTGCTGCCACAGTGCCTCTCAGTGCAGCTCAGACAT
ACACCGACTGCAACCCCTTGAACAGAACAAGTCAGTACATATGACTCGGA
AATCCAAACAAATTACTTTGGCAAAGGCAACACCACGTCCTACGACCGTG
CCACCACCGTGAACGTCACCACACCCGAAGAGACCTACCACACCTATGGA
GTCAACTGGACATCCAGCAAGACGGAGTGGATACTTGACGGCACTGTCGT
CCGTACGCTCGAGTATGCCGACGCTCTCAATGGCAAGAACTACCCCCAGA
CCCCCATGACCATCCGTATCGGTATCTGGGCCGGTGGTGACCCCGACAAT
TCCGAGGGAACCATCGAATGGGCTGGTGGTGAGACCGACTACGACGACGG
CCCGTTCATCATGTATTTGGAGTCGGTCAACATCATTAACTACACCCCCG
CTGAGTACTACAAGTACACGGACAAGACTGGCGACTACACAAGTATCAAG
GCCTACAACACCACCACATCGTCCAAGTCGACCAATTCGTCCAGTAGCTC
GTCCTCGTCCTCGGCCTCTTCCTCTTCAAGCTCGAGCTCCATCTCTACAT
CCAGCAGTGGTGCTAGTGGTCTATCCTACAGCGGGGTCTTGATGACGATC
CTTGGGTTGGGCACATTCGCGGGATTGCTTCTTTAGAAACCTGCACACCC
GACAAGGGTCTCAACCAGTGGTCCCTGAGCACCAACTTCACTGATGGCTC
GTCTTGGCGTGATAGATGGAATGTAACCGCCGATACCGTGAACAGCACCT
CCAAAGGTGCCGAGTTCAAGATCAGCCAGGAGGGCGATGCCCCTACCATT
GAGTCCAACTTCTACATCTTCTTCGGCTATGTGGAGGTCAAATTTCGTGC
TGCCAATGGTACCGGTATCATCAGCACCAGTGTGATGGAGTCTGACGACC
TGGATGAAATTGACTGGATGAAGTCATACATGTTATGGGCATTAACTGCC
CTTGCTGCCACAGTGCCTCTCAGTGCAGCTCAGACATACACCGACTGCAA
CCCCTTGAACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005618 | cell wall |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
| GO:0071555 | cell wall organization |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.4 |
| Note | antiSMASH:Cluster_2.3 |
| Note | SECRETED:SignalP(1-21) |
| Note | CAZy:GH16 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR000757 |
| DBxref | InterPro:IPR017168 |
| DBxref | PFAM:PF00722 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:476244..477332 - |
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