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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:503104..505594- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001720-T3 ID=KJC3_001720-T3|Name=KJC3_001720-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2491bp|location=Sequence derived from alignment at ch2:503104..505594- (Aspergillus niger KJC3)
AAAACAGCACTGCAACTTCCATCCTATCAATGTCTGTGGCTTCAACTAGA
CTGCAGTGCGACTCAAAGATTTCTCCCACAAGCCTCACCACAGCGGTTGG
GCATCATGGTTTGACAGATGTGATTACGTGCCCACCGCGGCGGCTAATAA
CGCCACTAAATCCAGCCTCGTCGATCGCCAGCTATAAATCCTCCGTCGGC
CGTCAGCTGCAGCCAACTTGTTAGTCGGACGGTCGCCAATTATGCTAGTA
TATGGGCCATCTTTCCGGCCCGTCTGACACGATTAATGGAGAAGCTTCGC
ACTAGCTCCACGAGTACAATGCCCGACGGCATTACCATCTATGAGCGAGG
TGGGTTCGTGTCGGCTAGCCGTGGCCATAGCGCTGATAAGCTCAGGAACC
GGACCATGGATGGAAACTGGGGCGTCCTTACTAGACTTGGACCTCGAGGT
ATGGGTCCCGCTGTGCCCCTGATGACCGGCATTGACGATAGCAGCACCCG
AAAAACTCGTTGCTTATGTAGGGTGTGCCCTCATTGTCGACATGAGTTTT
CGTTAATCTGTGTAGATTCTCAAAACGCCAAACGTTGAATGAGACGAAGT
ATCTACGCCTCTTTACGGATGAATTTCAGCCTGTTATTAGCAAGGACATC
AACGGGTCCCTGTTCTGTGATGACATTTTGGATGAGAATGACAAGCCTAT
CAAGCATGGTTTGTACCCACCGGGAACCAGGTGAGCATTGTTAACAAGTC
GCTTAGTCTCGTGGGCTTGTTATAAGATAAAACACGTCCGCGATCCTCAT
ACGTATGAATGGATCCAAACTACCGCCTTTGTGACCTGGTATCCGGAAAC
CCAAATACAGGTGGTCTTCATTGTCGATCATCCAGAACCGCCCAGTGACC
TGGTTGCCATCCTACCCACGACTCAGGCAGACAGCAACCCTTATGTTTGG
CACGCTGTGATTGCGACCACCATGATCGGTGTTTATGATAATTCTTTCTG
GGCGCTTCGAGATTTAGTCCGGACCACTGAGAAGGTATCCTTATTCCCAT
GCATACTAGCATACAGTATACTGAACCAAACCTAGTCAAGAGTTGATGTA
AACAGTCTGACCCCCGACTTCTTCCCTCACTTGCACGATATTGCACGGCA
TGTCTTTCACTCGAATGAGACCCTCGAGGTCGCAGAACATACCATGCAAT
GCTTGGTGGAGGAGCAGGCGCGCTCCTACGAGCTGTACCCCAATGTCAAC
AAGGGCGAATGGCTCCAGACCAAACGAAACCTACTTCGACGAGCCAAGAA
CTTTCACTCGCTGAAGATCCGAAGTCGATCGCTCTCGGAGCGGTTACACA
ACGAGATTAACTTGGTGTGCTCTCTGCCTACCTCCGTTTCATGCTTATAT
CTAACACTGGTAGGGATTCAATCTTGTCTCCCAACGATTCGGCCACGACG
CCAAGTCCGACAGTGCCATGATGCGGACGGTTGCGATCGTTAGTATGGTA
TACCTACCGGGGACATTTGTATCGGTATGTCACATGCTTGAAGGTTCATT
AAATCCCTCAATGCTAAGGAGTGTAGGGCTTATTCGGAACGAATTTCTTT
GATTACAATAATGGAAAGGAAGTCATGACCAGTTCATTCTGGATCTATTG
GGCCATTACTGTCCCTTTGACTCTGATCACAATGTTTATCTGGGCCTGTT
GGCATTATTATCCGAAGAAGAGGGTGGTGGGGGAGGAAAGACAACGAATG
TCGACCTTTGTTGACGGGAAGGTTTGATTTATTTGTCTATCTTAGACACA
ATTTACGTGCAGATGTGATATGAGTTACGAGTATTTTCGGCATGAGGTTA
TGAAATCTACGATGAGATATCAAGCACATCAAATCAATAAGAAGATAGGT
CTTTCTCGTGTTGTCTGAATAGTCTCTCCCGAAGCATGTTGCCAATGTCT
GCTGGCATGATATTCTCCGTTTCCCGACTCCTCCTTTACCGTTGCAGAGT
CTGATTTGGTCATGTTTGTTTATTGATCTACATTGTCTGCACTATTCACT
AGTATCGGTATCCCCGCGCCGATCAGCAGAGTCGAATAATTATTGTCCGA
AAATCCCAACATCCAACATGCATAGGCCTACTGTCATGTCTAATCATCCA
CAGGATTAACTCGCATATTTGAAATCTTGATGCTATTCCCAGCTCAATTA
TATATTTATATATTTCAATGTTACCATATATTATATGTATACATTGATTG
AATGGTTGGGCACTGCCATAGATCTTATTTATGCTTTCTTTGGAATTCTT
ATCTGATTTCTGACAGCCAGTAGGAATACAGGTCAGAGAATCGTGCAGTC
TATGTTTATTCTGGGTGTAAGATTACCGGGATGGATCGATTTAATTCATT
GGGTCTTATTTTTGAGGCTATTCTTATCGGAGATCCTCCCGGCGCGGAAA
GGAAAAAAAAAAAGAAAGAAAGGAAAAGAAAAACAAATTAG back to topCoding sequence (CDS) from alignment at ch2:503104..505594- >KJC3_001720-T3 ID=KJC3_001720-T3|Name=KJC3_001720-T3|organism=Aspergillus niger KJC3|type=CDS|length=5814bp|location=Sequence derived from alignment at ch2:503104..505594- (Aspergillus niger KJC3)
TCAAGAGTTGATGTAAACAGTCTGACCCCCGACTTCTTCCCTCACTTGCA
CGATATTGCACGGCATGTCTTTCACTCGAATGAGACCCTCGAGGTCGCAG
AACATACCATGCAATGCTTGGTGGAGGAGCAGGCGCGCTCCTACGAGCTG
TACCCCAATGTCAACAAGGGCGAATGGCTCCAGACCAAACGAAACCTACT
TCGACGAGCCAAGAACTTTCACTCGCTGAAGATCCGAAGTCGATCGCTCT
CGGAGCGGTTACACAACGAGATTAACTTGGTGTGCTCTCTGCCTACCTCC
GTTTCATGCTTATATCTAACACTGGTAGGGATTCAATCTTGTCTCCCAAC
GATTCGGCCACGACGCCAAGTCCGACAGTGCCATGATGCGGACGGTTGCG
ATCGTTAGTCTCGTGGGCTTGTTATAAGATAAAACACGTCCGCGATCCTC
ATACGTATGAATGGATCCAAACTACCGCCTTTGTGACCTGGTATCCGGAA
ACCCAAATACAGGTGGTCTTCATTGTCGATCATCCAGAACCGCCCAGTGA
CCTGGTTGCCATCCTACCCACGACTCAGGCAGACAGCAACCCTTATGTTT
GGCACGCTGTGATTGCGACCACCATGATCGGTGTTTATGATAATTCTTTC
TGGGCGCTTCGAGATTTAGTCCGGACCACTGAGAAGATTCTCAAAACGCC
AAACGTTGAATGAGACGAAGTATCTACGCCTCTTTACGGATGAATTTCAG
CCTGTTATTAGCAAGGACATCAACGGGTCCCTGTTCTGTGATGACATTTT
GGATGAGAATGACAAGCCTATCAAGCATGCACCCGAAAAACTCGTTGCTT
ATGAACCGGACCATGGATGGAAACTGGGGCGTCCTTACTAGACTTGGACC
TCGAGATGGAGAAGCTTCGCACTAGCTCCACGAGTACAATGCCCGACGGC
ATTACCATCTATGAGCGAGTCAAGAGTTGATGTAAACAGTCTGACCCCCG
ACTTCTTCCCTCACTTGCACGATATTGCACGGCATGTCTTTCACTCGAAT
GAGACCCTCGAGGTCGCAGAACATACCATGCAATGCTTGGTGGAGGAGCA
GGCGCGCTCCTACGAGCTGTACCCCAATGTCAACAAGGGCGAATGGCTCC
AGACCAAACGAAACCTACTTCGACGAGCCAAGAACTTTCACTCGCTGAAG
ATCCGAAGTCGATCGCTCTCGGAGCGGTTACACAACGAGATTAACTTGGT
GTGCTCTCTGCCTACCTCCGTTTCATGCTTATATCTAACACTGGTAGGGA
TTCAATCTTGTCTCCCAACGATTCGGCCACGACGCCAAGTCCGACAGTGC
CATGATGCGGACGGTTGCGATCGTTAGTCTCGTGGGCTTGTTATAAGATA
AAACACGTCCGCGATCCTCATACGTATGAATGGATCCAAACTACCGCCTT
TGTGACCTGGTATCCGGAAACCCAAATACAGGTGGTCTTCATTGTCGATC
ATCCAGAACCGCCCAGTGACCTGGTTGCCATCCTACCCACGACTCAGGCA
GACAGCAACCCTTATGTTTGGCACGCTGTGATTGCGACCACCATGATCGG
TGTTTATGATAATTCTTTCTGGGCGCTTCGAGATTTAGTCCGGACCACTG
AGAAGATTCTCAAAACGCCAAACGTTGAATGAGACGAAGTATCTACGCCT
CTTTACGGATGAATTTCAGCCTGTTATTAGCAAGGACATCAACGGGTCCC
TGTTCTGTGATGACATTTTGGATGAGAATGACAAGCCTATCAAGCATGCA
CCCGAAAAACTCGTTGCTTATGAACCGGACCATGGATGGAAACTGGGGCG
TCCTTACTAGACTTGGACCTCGAGATGGAGAAGCTTCGCACTAGCTCCAC
GAGTACAATGCCCGACGGCATTACCATCTATGAGCGAGTCAAGAGTTGAT
GTAAACAGTCTGACCCCCGACTTCTTCCCTCACTTGCACGATATTGCACG
GCATGTCTTTCACTCGAATGAGACCCTCGAGGTCGCAGAACATACCATGC
AATGCTTGGTGGAGGAGCAGGCGCGCTCCTACGAGCTGTACCCCAATGTC
AACAAGGGCGAATGGCTCCAGACCAAACGAAACCTACTTCGACGAGCCAA
GAACTTTCACTCGCTGAAGATCCGAAGTCGATCGCTCTCGGAGCGGTTAC
ACAACGAGATTAACTTGGTGTGCTCTCTGCCTACCTCCGTTTCATGCTTA
TATCTAACACTGGTAGGGATTCAATCTTGTCTCCCAACGATTCGGCCACG
ACGCCAAGTCCGACAGTGCCATGATGCGGACGGTTGCGATCGTTAGTCTC
GTGGGCTTGTTATAAGATAAAACACGTCCGCGATCCTCATACGTATGAAT
GGATCCAAACTACCGCCTTTGTGACCTGGTATCCGGAAACCCAAATACAG
GTGGTCTTCATTGTCGATCATCCAGAACCGCCCAGTGACCTGGTTGCCAT
CCTACCCACGACTCAGGCAGACAGCAACCCTTATGTTTGGCACGCTGTGA
TTGCGACCACCATGATCGGTGTTTATGATAATTCTTTCTGGGCGCTTCGA
GATTTAGTCCGGACCACTGAGAAGATTCTCAAAACGCCAAACGTTGAATG
AGACGAAGTATCTACGCCTCTTTACGGATGAATTTCAGCCTGTTATTAGC
AAGGACATCAACGGGTCCCTGTTCTGTGATGACATTTTGGATGAGAATGA
CAAGCCTATCAAGCATGCACCCGAAAAACTCGTTGCTTATGAACCGGACC
ATGGATGGAAACTGGGGCGTCCTTACTAGACTTGGACCTCGAGATGGAGA
AGCTTCGCACTAGCTCCACGAGTACAATGCCCGACGGCATTACCATCTAT
GAGCGAGTCAAGAGTTGATGTAAACAGTCTGACCCCCGACTTCTTCCCTC
ACTTGCACGATATTGCACGGCATGTCTTTCACTCGAATGAGACCCTCGAG
GTCGCAGAACATACCATGCAATGCTTGGTGGAGGAGCAGGCGCGCTCCTA
CGAGCTGTACCCCAATGTCAACAAGGGCGAATGGCTCCAGACCAAACGAA
ACCTACTTCGACGAGCCAAGAACTTTCACTCGCTGAAGATCCGAAGTCGA
TCGCTCTCGGAGCGGTTACACAACGAGATTAACTTGGTGTGCTCTCTGCC
TACCTCCGTTTCATGCTTATATCTAACACTGGTAGGGATTCAATCTTGTC
TCCCAACGATTCGGCCACGACGCCAAGTCCGACAGTGCCATGATGCGGAC
GGTTGCGATCGTTAGTCTCGTGGGCTTGTTATAAGATAAAACACGTCCGC
GATCCTCATACGTATGAATGGATCCAAACTACCGCCTTTGTGACCTGGTA
TCCGGAAACCCAAATACAGGTGGTCTTCATTGTCGATCATCCAGAACCGC
CCAGTGACCTGGTTGCCATCCTACCCACGACTCAGGCAGACAGCAACCCT
TATGTTTGGCACGCTGTGATTGCGACCACCATGATCGGTGTTTATGATAA
TTCTTTCTGGGCGCTTCGAGATTTAGTCCGGACCACTGAGAAGATTCTCA
AAACGCCAAACGTTGAATGAGACGAAGTATCTACGCCTCTTTACGGATGA
ATTTCAGCCTGTTATTAGCAAGGACATCAACGGGTCCCTGTTCTGTGATG
ACATTTTGGATGAGAATGACAAGCCTATCAAGCATGCACCCGAAAAACTC
GTTGCTTATGAACCGGACCATGGATGGAAACTGGGGCGTCCTTACTAGAC
TTGGACCTCGAGATGGAGAAGCTTCGCACTAGCTCCACGAGTACAATGCC
CGACGGCATTACCATCTATGAGCGAGTCAAGAGTTGATGTAAACAGTCTG
ACCCCCGACTTCTTCCCTCACTTGCACGATATTGCACGGCATGTCTTTCA
CTCGAATGAGACCCTCGAGGTCGCAGAACATACCATGCAATGCTTGGTGG
AGGAGCAGGCGCGCTCCTACGAGCTGTACCCCAATGTCAACAAGGGCGAA
TGGCTCCAGACCAAACGAAACCTACTTCGACGAGCCAAGAACTTTCACTC
GCTGAAGATCCGAAGTCGATCGCTCTCGGAGCGGTTACACAACGAGATTA
ACTTGGTGTGCTCTCTGCCTACCTCCGTTTCATGCTTATATCTAACACTG
GTAGGGATTCAATCTTGTCTCCCAACGATTCGGCCACGACGCCAAGTCCG
ACAGTGCCATGATGCGGACGGTTGCGATCGTTAGTCTCGTGGGCTTGTTA
TAAGATAAAACACGTCCGCGATCCTCATACGTATGAATGGATCCAAACTA
CCGCCTTTGTGACCTGGTATCCGGAAACCCAAATACAGGTGGTCTTCATT
GTCGATCATCCAGAACCGCCCAGTGACCTGGTTGCCATCCTACCCACGAC
TCAGGCAGACAGCAACCCTTATGTTTGGCACGCTGTGATTGCGACCACCA
TGATCGGTGTTTATGATAATTCTTTCTGGGCGCTTCGAGATTTAGTCCGG
ACCACTGAGAAGATTCTCAAAACGCCAAACGTTGAATGAGACGAAGTATC
TACGCCTCTTTACGGATGAATTTCAGCCTGTTATTAGCAAGGACATCAAC
GGGTCCCTGTTCTGTGATGACATTTTGGATGAGAATGACAAGCCTATCAA
GCATGCACCCGAAAAACTCGTTGCTTATGAACCGGACCATGGATGGAAAC
TGGGGCGTCCTTACTAGACTTGGACCTCGAGATGGAGAAGCTTCGCACTA
GCTCCACGAGTACAATGCCCGACGGCATTACCATCTATGAGCGAGTCAAG
AGTTGATGTAAACAGTCTGACCCCCGACTTCTTCCCTCACTTGCACGATA
TTGCACGGCATGTCTTTCACTCGAATGAGACCCTCGAGGTCGCAGAACAT
ACCATGCAATGCTTGGTGGAGGAGCAGGCGCGCTCCTACGAGCTGTACCC
CAATGTCAACAAGGGCGAATGGCTCCAGACCAAACGAAACCTACTTCGAC
GAGCCAAGAACTTTCACTCGCTGAAGATCCGAAGTCGATCGCTCTCGGAG
CGGTTACACAACGAGATTAACTTGGTGTGCTCTCTGCCTACCTCCGTTTC
ATGCTTATATCTAACACTGGTAGGGATTCAATCTTGTCTCCCAACGATTC
GGCCACGACGCCAAGTCCGACAGTGCCATGATGCGGACGGTTGCGATCGT
TAGTCTCGTGGGCTTGTTATAAGATAAAACACGTCCGCGATCCTCATACG
TATGAATGGATCCAAACTACCGCCTTTGTGACCTGGTATCCGGAAACCCA
AATACAGGTGGTCTTCATTGTCGATCATCCAGAACCGCCCAGTGACCTGG
TTGCCATCCTACCCACGACTCAGGCAGACAGCAACCCTTATGTTTGGCAC
GCTGTGATTGCGACCACCATGATCGGTGTTTATGATAATTCTTTCTGGGC
GCTTCGAGATTTAGTCCGGACCACTGAGAAGATTCTCAAAACGCCAAACG
TTGAATGAGACGAAGTATCTACGCCTCTTTACGGATGAATTTCAGCCTGT
TATTAGCAAGGACATCAACGGGTCCCTGTTCTGTGATGACATTTTGGATG
AGAATGACAAGCCTATCAAGCATGCACCCGAAAAACTCGTTGCTTATGAA
CCGGACCATGGATGGAAACTGGGGCGTCCTTACTAGACTTGGACCTCGAG
ATGGAGAAGCTTCGCACTAGCTCCACGAGTACAATGCCCGACGGCATTAC
CATCTATGAGCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001720-T3.utr3p1 | KJC3_001720-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001720-T3.utr5p1 | KJC3_001720-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.4 |
| Note | antiSMASH:Cluster_2.3 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:503104..505594 - |
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