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KJC3_001728-T1, KJC3_001728-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001728-T1
Unique NameKJC3_001728-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:524408..525571-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001728-T1 ID=KJC3_001728-T1|Name=KJC3_001728-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1164bp|location=Sequence derived from alignment at ch2:524408..525571- (Aspergillus niger KJC3)
ATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGCTACATC
CCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTGGCATTG
GCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCCCGCGTC
TATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGCCGAATG
TGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAGACGTGA
GCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACCAAGGAA
AGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTATACATAG
TGGTGGGTGATCTCAGCGAATATATATCCCGGACCGTGGCGTGACTCCTA
TTTAAAAGTACTCCGAATGTACGACTGATATCTATTCTGCAGAAACACCC
GAAGGACTTCGCAAGATCACCTCCCTCCTCTACTTCGCCCGCATACGCTT
CATCCTAAACCTCCTCCCTCTCCTCCAACAAGCCACCAGCCTCCGCCGCG
TCATAACTGTCGGGGCAGCCGGATCCGAAGGCCCCATCGACACCACCGAC
TTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTCGCGGGCATATCACGTC
ATTAACTACGGTGGCTCTGGAGACCTTAGCTGAGAAAGCCCCAACCGTAT
CGTTCATCAATACTCACCCCGGAGCTGTACAAACCGGGATAACCAGAGAG
GTGGATAATCTCCGTATGTGGATTGTCTGGCTTGCTCTCCTGCTGTTCGG
CCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGAGAGAGACATCTCTTTG
TGGCTACGAGTGCGAAGTATCCGGCGCGGGATGGGGACGACGGGGTGCCG
CTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGGATGGAAAGTTGCGAGG
GGGTGTTTATTGTGTTACCTCGGATGGGGAGAGCTCGGATAATGCGATTG
AGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGGAGAGATTGTCTGGAGG
TATACGGAGAGTCAGTTCAAGCGGATCACCGGGGGGCAAGCAATATAATG
CAAGGTGTGGCACGATAATTGTTGCCGAGTGTTGACTCTATATCATGTCT
AGATTTATTGCTAC
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Coding sequence (CDS) from alignment at ch2:524408..525571-

>KJC3_001728-T1 ID=KJC3_001728-T1|Name=KJC3_001728-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch2:524408..525571- (Aspergillus niger KJC3)
AAACACCCGAAGGACTTCGCAAGATCACCTCCCTCCTCTACTTCGCCCGC
ATACGCTTCATCCTAAACCTCCTCCCTCTCCTCCAACAAGCCACCAGCCT
CCGCCGCGTCATAACTGTCGGGGCAGCCGGATCCGAAGGCCCCATCGACA
CCACCGACTTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTCGCGGGCAT
ATCACGTCATTAACTACGGTGGCTCTGGAGACCTTAGCTGAGAAAGCCCC
AACCGTATCGTTCATCAATACTCACCCCGGAGCTGTACAAACCGGGATAA
CCAGAGAGGTGGATAATCTCCGTATGTGGATTGTCTGGCTTGCTCTCCTG
CTGTTCGGCCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGAGAGAGACA
TCTCTTTGTGGCTACGAGTGCGAAGTATCCGGCGCGGGATGGGGACGACG
GGGTGCCGCTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGGATGGAAAG
TTGCGAGGGGGTGTTTATTGTGTTACCTCGGATGGGGAGAGCTCGGATAA
TGCGATTGAGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGGAGAGATTG
TCTGGAGGTATACGGAGAGTCAGTTCAAGCGGATCACCGGGGGGCAAGCA
ATATAAATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGC
TACATCCCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTG
GCATTGGCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCC
CGCGTCTATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGC
CGAATGTGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAG
ACGTGAGCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACC
AAGGAAAGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTAT
ACATAGTGAAACACCCGAAGGACTTCGCAAGATCACCTCCCTCCTCTACT
TCGCCCGCATACGCTTCATCCTAAACCTCCTCCCTCTCCTCCAACAAGCC
ACCAGCCTCCGCCGCGTCATAACTGTCGGGGCAGCCGGATCCGAAGGCCC
CATCGACACCACCGACTTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTC
GCGGGCATATCACGTCATTAACTACGGTGGCTCTGGAGACCTTAGCTGAG
AAAGCCCCAACCGTATCGTTCATCAATACTCACCCCGGAGCTGTACAAAC
CGGGATAACCAGAGAGGTGGATAATCTCCGTATGTGGATTGTCTGGCTTG
CTCTCCTGCTGTTCGGCCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGA
GAGAGACATCTCTTTGTGGCTACGAGTGCGAAGTATCCGGCGCGGGATGG
GGACGACGGGGTGCCGCTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGG
ATGGAAAGTTGCGAGGGGGTGTTTATTGTGTTACCTCGGATGGGGAGAGC
TCGGATAATGCGATTGAGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGG
AGAGATTGTCTGGAGGTATACGGAGAGTCAGTTCAAGCGGATCACCGGGG
GGCAAGCAATATAAATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCC
CGGATTGCTACATCCCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGC
AACAAGTGGCATTGGCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTA
CACGGCCCCGCGTCTATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGT
ATCGTCGCCGAATGTGAAGCCCTGAATCCAGAGGGGGAATATATCTTCAT
CCCCGCAGACGTGAGCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACA
TCAAGACCAAGGAAAGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATA
GCGGCTATACATAGTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001728KJC3_001728Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001728-T1KJC3_001728-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001728-T1.cdsKJC3_001728-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001728-T1.utr3p1KJC3_001728-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001728-T1.exon2KJC3_001728-T1.exon2Aspergillus niger KJC3exon
KJC3_001728-T1.exon1KJC3_001728-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:524408..525571 -
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