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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:526430..531960+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001729-T1 ID=KJC3_001729-T1|Name=KJC3_001729-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5531bp|location=Sequence derived from alignment at ch2:526430..531960+ (Aspergillus niger KJC3) CGCGACGACCACGAGTCGGCCATCCTATATTAATCCTGCAGCCTGCCATC
GCCGCGCGAGAGACGCTTGGGCGTCTAATCTTCGATTCTTCAACGATGCT
CGCTCGGGACACTGCTACCGAGTTCTTCTCGGTAGTCTCACAGCAAGATG
ACTTCCCAGACGACAAGCGAGGGGCTCCCCCTCGCGGCCAACATTTTCGG
ATTCGGTGTGGCGGCCCTGGTGGGAGGAAGGGCCTTCATCGCCATCGTGA
ATCGACTGCGACATCGACAATTGACCCTCGACACAATGTTTCAATCGGAT
GGGTATGAAGACCGCGATGGAATTGCAACACCAGAATCTATCAAAGAATT
TTCCGACAAACCCCAACGCGTCGCGCTTGCAATCGGAACCGGAATTGGTG
TCTGGTTATCGTTATCGGAAGTTGTTGTGTTCAGCATTGTGTCTGCTTCC
ACTGATGATTTCACACGATGGATGCGACTTGGAGCCTGGGGAACCCTGGC
CCTCAGTACATGTGCGGTCTGGATGGAAGACGAATGCACGCTTCGGTTCC
GACACGGCATTCAAACAAGCATCGGGTGCATCGCCATGATGGTCCTTCTA
GTTGCAGATCAGTACCAATGTTACAAGGCATTGGATTTTTCCTTCCTGTC
TTGGTTCTTTCTGCTTGGCCAGTCTTGCGCCGCTTTGGGCGCCTGCATTG
CTGGAACGTCATTACCTCGTCGACCGGATGTTTTTCACAATGGGACTGTG
GTGGACCGCAAAGGATCAGCAACCTTCTTGGACCAGCTTTTCTTCGGATG
GGTGGGTCAGCTGCTTTCTGCGGGTCAGAAAGATGAGCTGGAGATCAGCC
ACCTGCCTGAGCTCGAGTTCAACAGCCGTTCACCTCAGCTATTTCACGCT
TTTAGCCAACAATGCACGGCTTCTACCTCAAGCCTTTGGAAGGTCCTTGT
CCTCAGTCATCGGAAAGCCCTATCCATTCAACTCCTTTTGACCTTCCTGA
ATGGGACCATGGCATTCGTGCCCCAGTTTTTTATCTTGGGAATCTTGCAG
CGTCTGGAAAACGACCCTGATGATCCTTGGCTATGGCTTTTTGTTCTTGG
ACTGGGCGCATCGACTATCGTGTCCGCTCTTATTGAAAATTGGAACCTCT
ATGTCTCATCCAATCTGATTGCAGTGAGGCTGCAGGAACAGCTATCAACA
GTGATCTATGACAAAGCGTTACGTTGTCGTGCAGTGAACAATGTCGGGAC
GGATTCGCAGAGTGCCAGTACCACCAGCCCATCTAGTCAGGGTACCATGA
ACTTGGTCGCTGTGGATGCAAAGAAAGTGGCTGACTTTTCAGCCGTTGGC
TTTCATCTTTACGAGGCACCACTGAAACTCATTATTGCGGCTATTTCGAT
TGGCCGGTTGCTTGGACCTCAGTGCCTACTGGTCGGTGGCTTAGTACTTT
TTCTTGTATCTGCTGGAAACTTTTACTCAGTCAGCCAGTTTTCGAAGCAA
CAAAGAGGTCTTTTAAGGTCTCGTGACAGCAAGATGGGAGTCATCAACGA
GGTTCTCCAGGGTATCCGCCAAGTCAAATTATCCGCTCTGGAGGAAAAAT
GGGAAAACCGCATCAACGACTCAAGAGGGAAGGAGCTACACAGCCAGTGG
CAAGTTTATAAGTGGGAACTTCTCATGTTCGTTGCTTATAATGTCACCCC
GGTTGCTGTTTCCGCCGCTTGCTTAGGTACATATGCCCTTTTACATGGGG
ACATGCCGGCGTCTCTCGCTTTCACCTCGGTCTCGCTTCTTGGTGCACTT
GAAACGCCTCTTGCAGTTCTCCCCCAAATCCTGCTTAATGCGACGGGGGC
TCAAATTAGCCTGCGACGGATCGAACGTTTCCTTCGAACTCCAGACAGGG
ATGTCGATATTGCGCCCGCTGATGGGGTTGTGCTGGATCAGGCCACAATT
TGCTGGAACGAAAATCAATACACTAAATGCTTCACCTTGAAAGACATGTC
TCTAACCTTCCCATCTGGCGCTTTGAGTATCATTACGGGGCCATCTGGCT
CCGGCAAAAGTCTCGTTCTTGCAGCAATCCTTGGTGAATGCGAGTTTCTG
CAAGGTTGTGTACGACGGTCCCCAAGCCTGGCGGTTGCCTACGTTGCTCA
GGAGCCGTGCTTGAAAGATGGAACGATCAGGGACAACATTCTTTATGGCC
TGCCGTTTCAGCAGGAGCGCTACCGCCGCGTTATTTTCGCCTGCTCCCTT
GACAGCGACATAAATAGTCTGAGGCTGAAAGATGACACTCAAATGGATGA
CCAAGGGAGCAATCTCAGTGGTGGCCAGAAATGGCGTATCTCTCTTGCGC
GCGCTCTCTATTCCGATGTCGAGATAATCGTACTGGATGATATTTTCAGC
TCCATTGATTCTCATACGGCGCAGCATCTATATCAGTATGCTCTGACGGG
GAGTCTCGCCGAGGGGCGCACACGTATACTGGCCACTTATCACCTGGAAC
TGTGCTTACCAAGAGCTGAATACGTTGTTGCCCTTGACGCCAATGGACTG
CAGTATGCTGGCCCCAGACAAAATCTGAGGGATATGGGCATATTCAAGCA
TATGGCCCAGGCTGCAGCAGGAGTGGAGAGGGCTTCTCACATCAAGAAAG
GCTCTGTGGTGTCGAATGTTCCGTCTTCAGAAAACTGGATCGGAACGCTA
TTGCCCAGTGAGCAAGAGCAACTAGAAGACTCAGCAGGGCAAGATGGTTT
GGTTGGTGAGGCCAATACACGAGACCGTAAATGGCGAAATCGCCAGCGAA
TTTTCCGCTTGACTGACGCCAAGTATCGTTGCTTGCTTGTTTTGTTCTTG
CATCTGAGCTATGGCGGACTAGCAGTTGGCCGAGGTCTGTGGATGATGAT
CTGGAGTAACAGCACGAACAAGAGCAGGTACACAGAAGACATGAATATGA
AAGGAGCTGAGTCCACGGGAGTGAACATTACGTGGTTTCTATCTATCTAC
CTATTATTGTCGATCTGTTCATGCATCGTCGCGATCAGTCGGAGCTTCTT
GGCAGTGCGCATTACCTTAAAGATGTCAAGAAAGCTATTTGAAAGGTTTC
TCTCTTCGATACTACGCGCTCCCCTGCAATGGCTCGACCAGATACCAGCC
GGCAACATTCTAAACAACTTTTCCGCCGACTTTAGCTTGATAGACTCGCG
CCTTGGATATGATCTCAACTACGCACTGGGTGTTGTGTTTGATCTCCTAT
CCATCGTGTTGGCTGCCTCCCTGGTGAATGTCTGGCTGAATCTCCTCTCC
GCCTGTTCACTCTTACTGGCGTTTTACTACGGGCAATTATTTATTAAGAA
AATCCGCGCCATCAAGGAACTCGAAAGTACAATGCGAAGCCCGGTACTTC
ACCACCTGTGTGCAACCATGGACGGAATAATGACCGTTCGCGCCTACCGT
CAAGAGGAGACCTACCGAAAGGAAATGTTTGGCAAGATTGACCGGCATTG
CCGGGCATCCTGGTGTCTCTGGCTGCTTACACGTTGGATCGCCGTCCGCG
CAAGCACCATTGGCGCCGCTTTTACCACTGCGGCCTCTATACTCGTGCTG
TCTTCCAACGGCATCACGGCGTCGACTGCTGGATTTGCCATCACATTCAT
CATGCGGTATAGTGGCGTTATGTCGCAGGTGATCAGGCAATACGCAAACC
TCGAGATATCTCTTAACAGTGTTGAACGTGTTTCGTGGTCCCTCGACATC
CCTGCAGAGAAATATGAATCCACCGACCCGATGCCAGAGTCGTGGCCCGC
GGACGGCCAACTGGACGTATCAGACTTGACCGTCTGTTATTCGCCCGATT
TGCCACCTGTTCTCTCCGATCTATCTTTTTCCATCCCGCCAAACACCAGA
GTCGGAGTGGTCGGTCGTACCGGTGCAGGCAAGTCCTCGTTGGCAATGGC
CCTCTTCCGCTTCCTGGAAGCTCAGCAAGGAAGTATTCATGTGGCGGGGG
TGGACATTTCGACTGTTCCGCTTCGCCAGCTACGGACGCGCCTGGCAATC
GTACCACAAGACCCGATCTTGTTCTCCGGCACGATACGGTCTAATCTCGA
TCCGTTTAACGAGCACTCAGAGCAAGAACTCTTGTCTGCTTTGCGACGCG
TGCACTGGACTATCCCTGATGCTGATCACGACGAAAACCATCCTGGATCG
CCTTTGATAAAACTAGATGAGGATGAAGAACCCAGAGAAAACCCTTTTAA
CTCTCTGGAACTCCAATTCCAGCACCCTCCAAGCATTCTAAACACTGCAG
TCACCGAAAGAGGCGCGAACTTCTCCCAAGGTCAAAGACAGTGTCTCTGC
CTCGCCCGGGCCATCCTCCGCCGGCCCAAAATCCTTGTTCTAGACGAGGC
AACCTCAGCCATCGACAAGCCCACAGACGCAGTAATCCAGAAATCCATCC
GGGCTGAGTTTGGGCACAATGACTCTACACTATTAGTCATCGCCCATCGC
ATTAGCACTATCGTTGACTTTGATCGGGTGCTTGTGCTAGACGCCGGTCG
GGCTATCGAGTACGGCACACCCCGGGAACTGATAGCGAATCGGAATGGAG
TCTTTCGCAGCCTAGTTGAGAGCAGCGTTGAGAGAGACGAGTTGTTGGAG
ACTATGCATGCTGCCGGTCCGTGAACTTGACACGGTCCTAGCCCCAAGTC
ACTACATCGATAAGGAGGAATCCAACCAACCCCGATCTTCAGGGGCTAGT
GAAAACCGTTAGCCCGCACGCATCCTCTCGGAGATACCTACGCAGCTGAG
ACCTACCTTGCGAAAAGATGATCTCGATGCTGAATCGCCGAATACTGCTT
AGAGTCCGCTGGGCGAAGGTGACAGAAATCCCTCAACCTCGATCTAACAC
GTCACAGTATAGAGCCCGATGTTTAATAATCCCTTTCTTACAAATCCGGT
GATTCCGGATGCTTCTTTCGCCTTCAAGTCTGGGGGATGATCCCAGGGTT
GTCGCGAAAAAGCAGCGAAAACCCAGATGGCTTTCCTAATGCGGCCTAGT
CTCCGCGAGGGTGCCTCGCCAAGAGTGGGATCGCATCGGGCTTAGTCTCC
GCGGGTGGGACGTCATTCAGCTGCATAGATTGAAGATAAATACCGGCCAT
TCTGCCTCTGTTTCAGGCTCAATTCTCACTTATCTACCTGTATAATAATC
ACATACGCTTGTCCGTATATACACACAATCAATCACCATGTCGTTTCCCT
ACAAGAAAGTCCTCATCATCGGTGCCACCTCCGGCATCGGTAAGGCGCTC
GCCGCCAAGGTGATCGAGAACGGCACCCAGCTTGTCATTGCCGGCAGAAG
AAAGGAGAACCTGGATGAGTTCGTCCAGAAATACGGCAGCGACAAGGTCG
CATCCAAGGTCTTTGACGTGATGCAGCTGGACCAGGTACGCGGCCCCCCT
CCTCCCCCCTGTACCATCCATATCACACCCACACCCTACTCACGTACTAT
TACTACATAGATCCCCCAGTTCGCCACCGAA back to topCoding sequence (CDS) from alignment at ch2:526430..531960+ >KJC3_001729-T1 ID=KJC3_001729-T1|Name=KJC3_001729-T1|organism=Aspergillus niger KJC3|type=CDS|length=4527bp|location=Sequence derived from alignment at ch2:526430..531960+ (Aspergillus niger KJC3) ATGACTTCCCAGACGACAAGCGAGGGGCTCCCCCTCGCGGCCAACATTTT CGGATTCGGTGTGGCGGCCCTGGTGGGAGGAAGGGCCTTCATCGCCATCG TGAATCGACTGCGACATCGACAATTGACCCTCGACACAATGTTTCAATCG GATGGGTATGAAGACCGCGATGGAATTGCAACACCAGAATCTATCAAAGA ATTTTCCGACAAACCCCAACGCGTCGCGCTTGCAATCGGAACCGGAATTG GTGTCTGGTTATCGTTATCGGAAGTTGTTGTGTTCAGCATTGTGTCTGCT TCCACTGATGATTTCACACGATGGATGCGACTTGGAGCCTGGGGAACCCT GGCCCTCAGTACATGTGCGGTCTGGATGGAAGACGAATGCACGCTTCGGT TCCGACACGGCATTCAAACAAGCATCGGGTGCATCGCCATGATGGTCCTT CTAGTTGCAGATCAGTACCAATGTTACAAGGCATTGGATTTTTCCTTCCT GTCTTGGTTCTTTCTGCTTGGCCAGTCTTGCGCCGCTTTGGGCGCCTGCA TTGCTGGAACGTCATTACCTCGTCGACCGGATGTTTTTCACAATGGGACT GTGGTGGACCGCAAAGGATCAGCAACCTTCTTGGACCAGCTTTTCTTCGG ATGGGTGGGTCAGCTGCTTTCTGCGGGTCAGAAAGATGAGCTGGAGATCA GCCACCTGCCTGAGCTCGAGTTCAACAGCCGTTCACCTCAGCTATTTCAC GCTTTTAGCCAACAATGCACGGCTTCTACCTCAAGCCTTTGGAAGGTCCT TGTCCTCAGTCATCGGAAAGCCCTATCCATTCAACTCCTTTTGACCTTCC TGAATGGGACCATGGCATTCGTGCCCCAGTTTTTTATCTTGGGAATCTTG CAGCGTCTGGAAAACGACCCTGATGATCCTTGGCTATGGCTTTTTGTTCT TGGACTGGGCGCATCGACTATCGTGTCCGCTCTTATTGAAAATTGGAACC TCTATGTCTCATCCAATCTGATTGCAGTGAGGCTGCAGGAACAGCTATCA ACAGTGATCTATGACAAAGCGTTACGTTGTCGTGCAGTGAACAATGTCGG GACGGATTCGCAGAGTGCCAGTACCACCAGCCCATCTAGTCAGGGTACCA TGAACTTGGTCGCTGTGGATGCAAAGAAAGTGGCTGACTTTTCAGCCGTT GGCTTTCATCTTTACGAGGCACCACTGAAACTCATTATTGCGGCTATTTC GATTGGCCGGTTGCTTGGACCTCAGTGCCTACTGGTCGGTGGCTTAGTAC TTTTTCTTGTATCTGCTGGAAACTTTTACTCAGTCAGCCAGTTTTCGAAG CAACAAAGAGGTCTTTTAAGGTCTCGTGACAGCAAGATGGGAGTCATCAA CGAGGTTCTCCAGGGTATCCGCCAAGTCAAATTATCCGCTCTGGAGGAAA AATGGGAAAACCGCATCAACGACTCAAGAGGGAAGGAGCTACACAGCCAG TGGCAAGTTTATAAGTGGGAACTTCTCATGTTCGTTGCTTATAATGTCAC CCCGGTTGCTGTTTCCGCCGCTTGCTTAGGTACATATGCCCTTTTACATG GGGACATGCCGGCGTCTCTCGCTTTCACCTCGGTCTCGCTTCTTGGTGCA CTTGAAACGCCTCTTGCAGTTCTCCCCCAAATCCTGCTTAATGCGACGGG GGCTCAAATTAGCCTGCGACGGATCGAACGTTTCCTTCGAACTCCAGACA GGGATGTCGATATTGCGCCCGCTGATGGGGTTGTGCTGGATCAGGCCACA ATTTGCTGGAACGAAAATCAATACACTAAATGCTTCACCTTGAAAGACAT GTCTCTAACCTTCCCATCTGGCGCTTTGAGTATCATTACGGGGCCATCTG GCTCCGGCAAAAGTCTCGTTCTTGCAGCAATCCTTGGTGAATGCGAGTTT CTGCAAGGTTGTGTACGACGGTCCCCAAGCCTGGCGGTTGCCTACGTTGC TCAGGAGCCGTGCTTGAAAGATGGAACGATCAGGGACAACATTCTTTATG GCCTGCCGTTTCAGCAGGAGCGCTACCGCCGCGTTATTTTCGCCTGCTCC CTTGACAGCGACATAAATAGTCTGAGGCTGAAAGATGACACTCAAATGGA TGACCAAGGGAGCAATCTCAGTGGTGGCCAGAAATGGCGTATCTCTCTTG CGCGCGCTCTCTATTCCGATGTCGAGATAATCGTACTGGATGATATTTTC AGCTCCATTGATTCTCATACGGCGCAGCATCTATATCAGTATGCTCTGAC GGGGAGTCTCGCCGAGGGGCGCACACGTATACTGGCCACTTATCACCTGG AACTGTGCTTACCAAGAGCTGAATACGTTGTTGCCCTTGACGCCAATGGA CTGCAGTATGCTGGCCCCAGACAAAATCTGAGGGATATGGGCATATTCAA GCATATGGCCCAGGCTGCAGCAGGAGTGGAGAGGGCTTCTCACATCAAGA AAGGCTCTGTGGTGTCGAATGTTCCGTCTTCAGAAAACTGGATCGGAACG CTATTGCCCAGTGAGCAAGAGCAACTAGAAGACTCAGCAGGGCAAGATGG TTTGGTTGGTGAGGCCAATACACGAGACCGTAAATGGCGAAATCGCCAGC GAATTTTCCGCTTGACTGACGCCAAGTATCGTTGCTTGCTTGTTTTGTTC TTGCATCTGAGCTATGGCGGACTAGCAGTTGGCCGAGGTCTGTGGATGAT GATCTGGAGTAACAGCACGAACAAGAGCAGGTACACAGAAGACATGAATA TGAAAGGAGCTGAGTCCACGGGAGTGAACATTACGTGGTTTCTATCTATC TACCTATTATTGTCGATCTGTTCATGCATCGTCGCGATCAGTCGGAGCTT CTTGGCAGTGCGCATTACCTTAAAGATGTCAAGAAAGCTATTTGAAAGGT TTCTCTCTTCGATACTACGCGCTCCCCTGCAATGGCTCGACCAGATACCA GCCGGCAACATTCTAAACAACTTTTCCGCCGACTTTAGCTTGATAGACTC GCGCCTTGGATATGATCTCAACTACGCACTGGGTGTTGTGTTTGATCTCC TATCCATCGTGTTGGCTGCCTCCCTGGTGAATGTCTGGCTGAATCTCCTC TCCGCCTGTTCACTCTTACTGGCGTTTTACTACGGGCAATTATTTATTAA GAAAATCCGCGCCATCAAGGAACTCGAAAGTACAATGCGAAGCCCGGTAC TTCACCACCTGTGTGCAACCATGGACGGAATAATGACCGTTCGCGCCTAC CGTCAAGAGGAGACCTACCGAAAGGAAATGTTTGGCAAGATTGACCGGCA TTGCCGGGCATCCTGGTGTCTCTGGCTGCTTACACGTTGGATCGCCGTCC GCGCAAGCACCATTGGCGCCGCTTTTACCACTGCGGCCTCTATACTCGTG CTGTCTTCCAACGGCATCACGGCGTCGACTGCTGGATTTGCCATCACATT CATCATGCGGTATAGTGGCGTTATGTCGCAGGTGATCAGGCAATACGCAA ACCTCGAGATATCTCTTAACAGTGTTGAACGTGTTTCGTGGTCCCTCGAC ATCCCTGCAGAGAAATATGAATCCACCGACCCGATGCCAGAGTCGTGGCC CGCGGACGGCCAACTGGACGTATCAGACTTGACCGTCTGTTATTCGCCCG ATTTGCCACCTGTTCTCTCCGATCTATCTTTTTCCATCCCGCCAAACACC AGAGTCGGAGTGGTCGGTCGTACCGGTGCAGGCAAGTCCTCGTTGGCAAT GGCCCTCTTCCGCTTCCTGGAAGCTCAGCAAGGAAGTATTCATGTGGCGG GGGTGGACATTTCGACTGTTCCGCTTCGCCAGCTACGGACGCGCCTGGCA ATCGTACCACAAGACCCGATCTTGTTCTCCGGCACGATACGGTCTAATCT CGATCCGTTTAACGAGCACTCAGAGCAAGAACTCTTGTCTGCTTTGCGAC GCGTGCACTGGACTATCCCTGATGCTGATCACGACGAAAACCATCCTGGA TCGCCTTTGATAAAACTAGATGAGGATGAAGAACCCAGAGAAAACCCTTT TAACTCTCTGGAACTCCAATTCCAGCACCCTCCAAGCATTCTAAACACTG CAGTCACCGAAAGAGGCGCGAACTTCTCCCAAGGTCAAAGACAGTGTCTC TGCCTCGCCCGGGCCATCCTCCGCCGGCCCAAAATCCTTGTTCTAGACGA GGCAACCTCAGCCATCGACAAGCCCACAGACGCAGTAATCCAGAAATCCA TCCGGGCTGAGTTTGGGCACAATGACTCTACACTATTAGTCATCGCCCAT CGCATTAGCACTATCGTTGACTTTGATCGGGTGCTTGTGCTAGACGCCGG TCGGGCTATCGAGTACGGCACACCCCGGGAACTGATAGCGAATCGGAATG GAGTCTTTCGCAGCCTAGTTGAGAGCAGCGTTGAGAGAGACGAGTTGTTG GAGACTATGCATGCTGCCGGTCCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0042626 | ATPase-coupled transmembrane transporter activity |
GO:0016887 | ATPase activity |
GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001729-T1.utr5p1 | KJC3_001729-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001729-T1.utr3p1 | KJC3_001729-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR027417 |
DBxref | InterPro:IPR017871 |
DBxref | InterPro:IPR011527 |
DBxref | InterPro:IPR003439 |
DBxref | InterPro:IPR036640 |
DBxref | InterPro:IPR003593 |
DBxref | PFAM:PF00005 |
DBxref | PFAM:PF00664 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch2 | supercontig | ch2:526430..531960 + |
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