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KJC3_001731-T1, KJC3_001731-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001731-T1
Unique NameKJC3_001731-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:532389..533846-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001731-T1 ID=KJC3_001731-T1|Name=KJC3_001731-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1458bp|location=Sequence derived from alignment at ch2:532389..533846- (Aspergillus niger KJC3)
CTAATGCACATCTGACCCGCCTATTGCCCCCATTCAATCTCACTGCTCCT
CTTTATCAGATCGAAATGGCCCCCGACATTCCCAGGCCACCGACTCTTCG
CCGGTCATGCCAAGCCTGCGCGCGCGGCAAACGCCGCTGTGACCAGCGCT
GGCCGCGCTGCACCCGGTGCCAAACCCGGAAGATAGACTGCGAATACATC
AACGTCCCATTAACGGTGGGCTCCGACACAGGCTCAACAGCTACCACAAC
AACAATCACTACCAGATCAACGCTCTCACCGAAACTCCCTCACAAGAAGC
CAAGACAGCATTACCAACTAACGACAACACACTCCATCCCTCTTTCCCTC
CCCTTAGAAATCACAAAGGGCTACTCCCAACCCATCATTGCATACCTAGT
CTCAGGCATGCGCGCATACCCATCCACCTTCGCCCTGAACATGAAAACCC
ACTTCATCCACCCAGACCTATGGCCCAGTCCATCTTCTCCCCCGTTACCT
ATCAGGGACATTCACGCCCTGTGTAAACTACACTCCACCAGCACAAACAA
AACCATCATTCCCCTCCTCAAACAGAAATCCTCCTCCCTCCTCCGCACCC
TCAACCACACCACCAGCTTTGAGGAAATGCTAGCCACCGCGCAGGCCCTC
CTCCTCACGCAATGCATGCTCGTTTTTTCCGATACAGACACATCCCAATC
CTACTCCGAATCAATCAGCACTATGCTCTACAATCTCGGCCAGAAACTCT
GGCAACAAGCCCCCATCCAACTACCAGGCAGTTTGAGCCCGCGCAGAGCG
TGGCTGTTCGCTGAGAGTGTGCGGAGGACGATCATCGTGGGGTTCATGCT
GCGGAGCGTGTACTCGCTCAAGATGCGGAATTATTCCGTCCGCACGCCGT
TCGTGGATTCATTGCCGTTTGATATGAGGACTGGGTTGTGGGATCGGGAT
GTTGATGTTGGTGGGGATGCGAGTGGGGAGTCGCTGGATGCGATGGTCTC
GTTGCATCAGTATTCAGGCATGTTGGAAAGTGGCATGGTTCATGGGATCT
CGGAATTTGGGGGGTTGATTCTTGCCGCGTGTAGAGGGAGGGCGGTGCAG
GGCGTGCCGTATCCTTCTGTTACTGGGTATGCGGGGTACTAATCACACTA
CACTACACTGTGCTATTTTCTTTCTTTCTTTCTATTTGCGAATGTTTGCC
CATGGCATCGATGTAATATAATCATGGTAAGTCTATATCCAATCTGTCTA
TGCATTCTGCGCCCGGCTAACAAACCCTAAAAGAAAGATTCATCCCAATT
ACACCAAGAACTGCTTCAACAATCCGTTCAACATCGCCGTCATGTCCGCA
TACAGACTCTGCCTCTTCGTCTCAAAGGCCTCGTAGATATCGTTCGCCGA
ACCCACAGCAATCTGATCCTCACCAGACTGCAATCTGCGCCACACCTCAC
CGACAAAC
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Coding sequence (CDS) from alignment at ch2:532389..533846-

>KJC3_001731-T1 ID=KJC3_001731-T1|Name=KJC3_001731-T1|organism=Aspergillus niger KJC3|type=CDS|length=1077bp|location=Sequence derived from alignment at ch2:532389..533846- (Aspergillus niger KJC3)
ATGGCCCCCGACATTCCCAGGCCACCGACTCTTCGCCGGTCATGCCAAGC
CTGCGCGCGCGGCAAACGCCGCTGTGACCAGCGCTGGCCGCGCTGCACCC
GGTGCCAAACCCGGAAGATAGACTGCGAATACATCAACGTCCCATTAACG
GTGGGCTCCGACACAGGCTCAACAGCTACCACAACAACAATCACTACCAG
ATCAACGCTCTCACCGAAACTCCCTCACAAGAAGCCAAGACAGCATTACC
AACTAACGACAACACACTCCATCCCTCTTTCCCTCCCCTTAGAAATCACA
AAGGGCTACTCCCAACCCATCATTGCATACCTAGTCTCAGGCATGCGCGC
ATACCCATCCACCTTCGCCCTGAACATGAAAACCCACTTCATCCACCCAG
ACCTATGGCCCAGTCCATCTTCTCCCCCGTTACCTATCAGGGACATTCAC
GCCCTGTGTAAACTACACTCCACCAGCACAAACAAAACCATCATTCCCCT
CCTCAAACAGAAATCCTCCTCCCTCCTCCGCACCCTCAACCACACCACCA
GCTTTGAGGAAATGCTAGCCACCGCGCAGGCCCTCCTCCTCACGCAATGC
ATGCTCGTTTTTTCCGATACAGACACATCCCAATCCTACTCCGAATCAAT
CAGCACTATGCTCTACAATCTCGGCCAGAAACTCTGGCAACAAGCCCCCA
TCCAACTACCAGGCAGTTTGAGCCCGCGCAGAGCGTGGCTGTTCGCTGAG
AGTGTGCGGAGGACGATCATCGTGGGGTTCATGCTGCGGAGCGTGTACTC
GCTCAAGATGCGGAATTATTCCGTCCGCACGCCGTTCGTGGATTCATTGC
CGTTTGATATGAGGACTGGGTTGTGGGATCGGGATGTTGATGTTGGTGGG
GATGCGAGTGGGGAGTCGCTGGATGCGATGGTCTCGTTGCATCAGTATTC
AGGCATGTTGGAAAGTGGCATGGTTCATGGGATCTCGGAATTTGGGGGGT
TGATTCTTGCCGCGTGTAGAGGGAGGGCGGTGCAGGGCGTGCCGTATCCT
TCTGTTACTGGGTATGCGGGGTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001731KJC3_001731Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001731-T1KJC3_001731-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001731-T1.cdsKJC3_001731-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001731-T1.utr3p2KJC3_001731-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_001731-T1.utr3p1KJC3_001731-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001731-T1.exon2KJC3_001731-T1.exon2Aspergillus niger KJC3exon
KJC3_001731-T1.exon1KJC3_001731-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001731-T1.utr5p1KJC3_001731-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:532389..533846 -
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