KJC3_001743-T1, KJC3_001743-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_001743-T1
Unique Name	KJC3_001743-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch2:561168..562769+
coding sequence from alignment at ch2:561168..562769+

mRNA from alignment at ch2:561168..562769+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_001743-T1 ID=KJC3_001743-T1|Name=KJC3_001743-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1602bp|location=Sequence derived from alignment at ch2:561168..562769+ (Aspergillus niger KJC3)
ATGACAGTACCCGTTACTGAGCGAGCATTGCAAGTATGCCTGACCTGCAA
ATTGAGAAAGAAGGCATGCGACAAGACACTGCCAACCTGTGGGTACTGCA
CCAAACGGAACCTGCCATGTCGATACCAAGCTCCTCCGGCGGCTGAAGAA
ACGGGCACAGAAGCGACTACTCAGATAGAAATAAATGCGATCTTGCTACA
GATGGTTTCCCTGTTTGGCCCACCATCGGGAAATGTGTCCACAGCACCCA
GAAGGACATGGTACCAAGTATGCCGCATCATCCAATTGGCAGACCTCTCG
TTGCAGGAAATCAGTCGCCGGTATTTCAGCAACTTCCACAAATGGCTTCC
AGTAGTATCGTACGAAATCTTTCAAGGAACTTTGGCCCAGTACAATAGCC
CGTCTTGCCCACCACCGGTGGACTATTCTGTCCTTGTGCTGGCTATGTGC
CTGGTGACCCTGCAGCCGTCGAGACTCAATACACACTTAACACCACATAG
CCTATATGCCACTATGAAGATGCTATTCGCGGAAGCTCAAGCCATAATAT
GTGCCTCAACAAATTTACTTCAGGCTGGACTGCTCATCGCTGCATATGAG
TATGCCAACGGTCGGCCTGAGGCAGCGAACATTACGATGGGGACTTTAGC
CAGAACCGCTTTTGCAATTGGGTTAGCAAATCCCAGCTCCTGGCAGACAA
ACGAAGCTAGTAATATCCCACTTGAAAGACTGGAGCGCCTAAATTTGTGG
TGGGGTGTAATCATTCTCGAAAGGTAGGTCAATTACAAGAAGATTTTGCA
CACATAGGCTCACCCAGCCTAGGCTTATTCTATGCGAGATCAAAGACAAG
ACACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCCGAG
TGACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCTCAC
ATGAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGCCAT
CAGGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAGGCT
CCCCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACGAGC
AACTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAAATT
GGCCATGATTGCAGTCCTATAGCATCTGCCGTGAGGTATGTCAGCCGTAA
TCTCCCTGCCTTGTGACCCGAAAGGGAATGGATATCCCTAGTCTGAAGGA
CCGCGCCACTCGGCTGCAGCTAACTGATTCTGCCAGGGCGCTTTGCCTAT
TACATCAGGAAGTCATAGAGTCTCCTTCCAACACCGTTGACTTGCAGAGT
CTGCAATACTCACAGGCGGCTCTAGGAATGGTATCTAATGTAGTGGTGGA
TGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCAAAATTCCCATGCCG
ATCTACTACCCCTGAGCTGCTCGTACACTCTGCACATGGCAATGAGACAT
ATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGCCGCTCTAGCGACCT
GAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGACAGATGGAAAGCCT
GA

Coding sequence (CDS) from alignment at ch2:561168..562769+

>KJC3_001743-T1 ID=KJC3_001743-T1|Name=KJC3_001743-T1|organism=Aspergillus niger KJC3|type=CDS|length=4356bp|location=Sequence derived from alignment at ch2:561168..562769+ (Aspergillus niger KJC3)
ATGACAGTACCCGTTACTGAGCGAGCATTGCAAGTATGCCTGACCTGCAA
ATTGAGAAAGAAGGCATGCGACAAGACACTGCCAACCTGTGGGTACTGCA
CCAAACGGAACCTGCCATGTCGATACCAAGCTCCTCCGGCGGCTGAAGAA
ACGGGCACAGAAGCGACTACTCAGATAGAAATAAATGCGATCTTGCTACA
GATGGTTTCCCTGTTTGGCCCACCATCGGGAAATGTGTCCACAGCACCCA
GAAGGACATGGTACCAAGTATGCCGCATCATCCAATTGGCAGACCTCTCG
TTGCAGGAAATCAGTCGCCGGTATTTCAGCAACTTCCACAAATGGCTTCC
AGTAGTATCGTACGAAATCTTTCAAGGAACTTTGGCCCAGTACAATAGCC
CGTCTTGCCCACCACCGGTGGACTATTCTGTCCTTGTGCTGGCTATGTGC
CTGGTGACCCTGCAGCCGTCGAGACTCAATACACACTTAACACCACATAG
CCTATATGCCACTATGAAGATGCTATTCGCGGAAGCTCAAGCCATAATAT
GTGCCTCAACAAATTTACTTCAGGCTGGACTGCTCATCGCTGCATATGAG
TATGCCAACGGTCGGCCTGAGGCAGCGAACATTACGATGGGGACTTTAGC
CAGAACCGCTTTTGCAATTGGGTTAGCAAATCCCAGCTCCTGGCAGACAA
ACGAAGCTAGTAATATCCCACTTGAAAGACTGGAGCGCCTAAATTTGTGG
TGGGGTGTAATCATTCTCGAAAGGCTTATTCTATGCGAGATCAAAGACAA
GACACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCCGA
GTGACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCTCA
CATGAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGCCA
TCAGGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAGGC
TCCCCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACGAG
CAACTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAAAT
TGGCCATGATTGCAGTCCTATAGCATCTGCCGTGAGGGCGCTTTGCCTAT
TACATCAGGAAGTCATAGAGTCTCCTTCCAACACCGTTGACTTGCAGAGT
CTGCAATACTCACAGGCGGCTCTAGGAATGGTATCTAATGTAGTGGTGGA
TGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCAAAATTCCCATGCCG
ATCTACTACCCCTGAGCTGCTCGTACACTCTGCACATGGCAATGAGACAT
ATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGCCGCTCTAGCGACCT
GAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGACAGATGGAAAGCCT
GAATGACAGTACCCGTTACTGAGCGAGCATTGCAAGTATGCCTGACCTGC
AAATTGAGAAAGAAGGCATGCGACAAGACACTGCCAACCTGTGGGTACTG
CACCAAACGGAACCTGCCATGTCGATACCAAGCTCCTCCGGCGGCTGAAG
AAACGGGCACAGAAGCGACTACTCAGATAGAAATAAATGCGATCTTGCTA
CAGATGGTTTCCCTGTTTGGCCCACCATCGGGAAATGTGTCCACAGCACC
CAGAAGGACATGGTACCAAGTATGCCGCATCATCCAATTGGCAGACCTCT
CGTTGCAGGAAATCAGTCGCCGGTATTTCAGCAACTTCCACAAATGGCTT
CCAGTAGTATCGTACGAAATCTTTCAAGGAACTTTGGCCCAGTACAATAG
CCCGTCTTGCCCACCACCGGTGGACTATTCTGTCCTTGTGCTGGCTATGT
GCCTGGTGACCCTGCAGCCGTCGAGACTCAATACACACTTAACACCACAT
AGCCTATATGCCACTATGAAGATGCTATTCGCGGAAGCTCAAGCCATAAT
ATGTGCCTCAACAAATTTACTTCAGGCTGGACTGCTCATCGCTGCATATG
AGTATGCCAACGGTCGGCCTGAGGCAGCGAACATTACGATGGGGACTTTA
GCCAGAACCGCTTTTGCAATTGGGTTAGCAAATCCCAGCTCCTGGCAGAC
AAACGAAGCTAGTAATATCCCACTTGAAAGACTGGAGCGCCTAAATTTGT
GGTGGGGTGTAATCATTCTCGAAAGGCTTATTCTATGCGAGATCAAAGAC
AAGACACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCC
GAGTGACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCT
CACATGAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGC
CATCAGGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAG
GCTCCCCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACG
AGCAACTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAA
ATTGGCCATGATTGCAGTCCTATAGCATCTGCCGTGAGGGCGCTTTGCCT
ATTACATCAGGAAGTCATAGAGTCTCCTTCCAACACCGTTGACTTGCAGA
GTCTGCAATACTCACAGGCGGCTCTAGGAATGGTATCTAATGTAGTGGTG
GATGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCAAAATTCCCATGC
CGATCTACTACCCCTGAGCTGCTCGTACACTCTGCACATGGCAATGAGAC
ATATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGCCGCTCTAGCGAC
CTGAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGACAGATGGAAAGC
CTGAATGACAGTACCCGTTACTGAGCGAGCATTGCAAGTATGCCTGACCT
GCAAATTGAGAAAGAAGGCATGCGACAAGACACTGCCAACCTGTGGGTAC
TGCACCAAACGGAACCTGCCATGTCGATACCAAGCTCCTCCGGCGGCTGA
AGAAACGGGCACAGAAGCGACTACTCAGATAGAAATAAATGCGATCTTGC
TACAGATGGTTTCCCTGTTTGGCCCACCATCGGGAAATGTGTCCACAGCA
CCCAGAAGGACATGGTACCAAGTATGCCGCATCATCCAATTGGCAGACCT
CTCGTTGCAGGAAATCAGTCGCCGGTATTTCAGCAACTTCCACAAATGGC
TTCCAGTAGTATCGTACGAAATCTTTCAAGGAACTTTGGCCCAGTACAAT
AGCCCGTCTTGCCCACCACCGGTGGACTATTCTGTCCTTGTGCTGGCTAT
GTGCCTGGTGACCCTGCAGCCGTCGAGACTCAATACACACTTAACACCAC
ATAGCCTATATGCCACTATGAAGATGCTATTCGCGGAAGCTCAAGCCATA
ATATGTGCCTCAACAAATTTACTTCAGGCTGGACTGCTCATCGCTGCATA
TGAGTATGCCAACGGTCGGCCTGAGGCAGCGAACATTACGATGGGGACTT
TAGCCAGAACCGCTTTTGCAATTGGGTTAGCAAATCCCAGCTCCTGGCAG
ACAAACGAAGCTAGTAATATCCCACTTGAAAGACTGGAGCGCCTAAATTT
GTGGTGGGGTGTAATCATTCTCGAAAGGCTTATTCTATGCGAGATCAAAG
ACAAGACACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTG
CCGAGTGACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTC
CTCACATGAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTG
GCCATCAGGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGA
AGGCTCCCCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGA
CGAGCAACTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGG
AAATTGGCCATGATTGCAGTCCTATAGCATCTGCCGTGAGGGCGCTTTGC
CTATTACATCAGGAAGTCATAGAGTCTCCTTCCAACACCGTTGACTTGCA
GAGTCTGCAATACTCACAGGCGGCTCTAGGAATGGTATCTAATGTAGTGG
TGGATGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCAAAATTCCCAT
GCCGATCTACTACCCCTGAGCTGCTCGTACACTCTGCACATGGCAATGAG
ACATATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGCCGCTCTAGCG
ACCTGAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGACAGATGGAAA
GCCTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0042025	host cell nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0008270	zinc ion binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_001743	KJC3_001743	Aspergillus niger KJC3	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001743-T1.exon1	KJC3_001743-T1.exon1	Aspergillus niger KJC3	exon
KJC3_001743-T1.exon2	KJC3_001743-T1.exon2	Aspergillus niger KJC3	exon
KJC3_001743-T1.exon3	KJC3_001743-T1.exon3	Aspergillus niger KJC3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001743-T1.cds	KJC3_001743-T1.cds	Aspergillus niger KJC3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001743-T1	KJC3_001743-T1-protein	Aspergillus niger KJC3	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR007219
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch2	supercontig	ch2:561168..562769 +

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KJC3_001743-T1, KJC3_001743-T1 (mRNA) Aspergillus niger KJC3