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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:567140..569777+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001746-T1 ID=KJC3_001746-T1|Name=KJC3_001746-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2638bp|location=Sequence derived from alignment at ch2:567140..569777+ (Aspergillus niger KJC3)
CCAATGACAGGCGGCCACTTGCTGGATTTGCTTCACCTTGCAGACAGGAT
GTCACTGTGCCATTTCTGGTGGGGGGATATGAAGTCGGCATGACTACTTC
TGCACTGCTTCCCCGCTTCGTCGGGTGAGTGTAGATTTTACGCCCATACA
GGAGAGTGTATGCATCATGAAGCTCGTTACCCAGATAGCCATCGCATGGC
AGTTAGCTGTCACTGCAGCTGCAGTAACGCAGGTTAGTAGTTACCGTACC
ATTGGGACTCAAGCTGATCATTCAGTCGGAATTCGTCTCCCTCGATTCGT
ACTTCAACAACAAGGCATTTGGCGTATATCCCGGCCAGACGTCCTTTGAT
GCGTTGAATCAGTCCTATCCAGACCCCAGCATTATTGGCATCAATGGAAC
CTACACCTCCACGCACACTGGTGTTGTCTACGACTTTCCGGGCTATCGTG
GGCCCGACCTCCCTGACAATGTTGTCTGTGAAGGCCAGACAATCAATGTG
CCTCGCGACCAGTACTTCTCAGCATCCATGTTGGTAACATCCGACGTTCA
GCTGTCCACCGTGTCGGGGAATGTGACATACACGTATTCAGACGACTCGA
CACTTGTCTCCGAGCTGCGCAGTCTACCCTGGTGGGCATTCCTGACAATC
AATCGCGGCGAGATCATCTTCCCCTACCGGTACACTCACAACGACACCAA
CTTCAACACATCTCACATCTTCGAATACTCTGCAGCACTGGATCCCAACA
AGACTCTGCATTCGATCACCCTGCCAGTCACTACCAACACAACCACCGGC
AGACTGCATATTTTTTCCGTATCCCTGTGGAAATCCACCGCCCCATCAGC
CCAAGTGCAATTCGTGCGCCCGACCCAAAAGTGGACAGAAAGCGGCAACC
AGATAGTCGAAGTGACCATCAACAACCCAGGCAGCAGCTGCATCGCAGGA
CCTGGAGTCAACTTATCATTATCCATGCCTGGAATCCGAACCCTAGAGCC
CGCAAACGTCAAACGACTCTGTCCCGGCGACCAGAAACGCGTCAACATCG
GCATCAACGGCACGGCGAACGGAACAGCAACCGTTATCCTCAACTACACC
CACTCCATCCAGCACCAAACCTACCCTCACCCCCTCTCCCTCGGCCTAAC
AGAATGGACCTCAGACCTGTCTAGCCTCTCACAACATGAAAGCCCTGAAT
GGTTCGACGACGCCAAATTCGGCATCATGATCCACTGGGGTCCCTACTCC
GTCCCCGGCTGGGGCAACTCGACTCCCTACGAAAGCTACGCCGAGTGGTT
CTGGTACTCCACCCCCCTTCCCCATATCCCAACCTCTTCCCCCAAACCCA
TCTAACATAGAAAACCGTCAGGTGGTACACCACGCACCGTGCCGCCGACA
AATCCGACACCTACGACTACCGGCTGCGCACCTTCGGGCCCACCTGGAAC
TACGACGACTCGTTCCCCTCCTTCACAGCAGCTAACTTCTCCCCGAAAGC
CTGGGTCGACCTCATCTCAGCCTCGGGGGCCAAATACTTCGTGCTAACAA
CCAAACACCACGACGGGTTCGCCCTCTTCGACACGCAAAACACCACCAAC
CGCTCCTCCCTCCACTACGGCCCGCACCGGGACCTCGTGTCAGAACTCTT
CACCGCGTCCTCAATCCACCACCCCACCCTAAAACGCGGCACCTACTTCT
CCCTCCCAGAATGGTTCAATCCAGACTTCAGGCCCTACGGGTTCGCCGAA
CTCCCGGGGAACACCTCCACCAGCTGGCCAGGCATCATCGCCCGCAACCC
CTACACTGGCCTGAATGAACCCTACACAGGCCGCATCCCCGTCACGGATT
TCATCACAGACGTAATGGTTCCCCAAATGACCATTCTAGCTCACAATTAC
AGCACAGACATCATGTGGTGTGACTGCGGGGCCGCGAACGGGACTGCGTC
TTTCGCTAGCGAATGGTTCAATTCCGCGCGTGCAGATAATCGCCAAGTGG
CAATTAATTCGCGGTGCGGGGTCGCGGAAGTGTCCGACTTCGATACGCCC
GAGTATGCGACGTTTAGCTCGGCGCAGTTGCGCAAGTGGGAGAGTAATAT
GGGCATGGATCCGTATAGTTATGGGTTTAATCGGGCGACTGCGGAAAGAA
GTTATATGAATGCTAGTACGGTGGTCAGGGATCTGGTGGATATGGTGAGT
AAGAATGGGAATTTTTTGTTGGATGTTGGGCCGCGCGCGGATGGGAGTAT
TGTCGAGAGGGAGGAGAGGGAGTTGAGGAGGGCTGGGGAGTGGATTCGAG
GACATGGGGAGGCGGTGTTTGGGACGAGGGTTTGGTGGGTGAGGAGTGAG
GCGGTTGGTGTGACAGGTGATGGTGGGGATGTCGGGGTGAGGTTTACGCA
GACGAATGAGGCGTTTTATTTGTTGTTTCTGGGGGATCCGGGGAAGAAGG
TGTTTGTGGATGCGTCGGTGCCGTTGTTGAGGGGGGATAGAGTTGTTGTG
GTGGGTGGCGATGGGGAAAGGGAGGTAGAGGTTGAGTGGGAGGGGAGTGC
GACGGAGGGATTTACGTTTAGGGTTCCTGAGGGGGTATGGGATGGAGAGG
AGTTTTGCTGGGTGTTGAAGGTTGTGTATCTTGCTTAG back to topCoding sequence (CDS) from alignment at ch2:567140..569777+ >KJC3_001746-T1 ID=KJC3_001746-T1|Name=KJC3_001746-T1|organism=Aspergillus niger KJC3|type=CDS|length=7083bp|location=Sequence derived from alignment at ch2:567140..569777+ (Aspergillus niger KJC3)
ATGAAGCTCGTTACCCAGATAGCCATCGCATGGCAGTTAGCTGTCACTGC
AGCTGCAGTAACGCAGTCGGAATTCGTCTCCCTCGATTCGTACTTCAACA
ACAAGGCATTTGGCGTATATCCCGGCCAGACGTCCTTTGATGCGTTGAAT
CAGTCCTATCCAGACCCCAGCATTATTGGCATCAATGGAACCTACACCTC
CACGCACACTGGTGTTGTCTACGACTTTCCGGGCTATCGTGGGCCCGACC
TCCCTGACAATGTTGTCTGTGAAGGCCAGACAATCAATGTGCCTCGCGAC
CAGTACTTCTCAGCATCCATGTTGGTAACATCCGACGTTCAGCTGTCCAC
CGTGTCGGGGAATGTGACATACACGTATTCAGACGACTCGACACTTGTCT
CCGAGCTGCGCAGTCTACCCTGGTGGGCATTCCTGACAATCAATCGCGGC
GAGATCATCTTCCCCTACCGGTACACTCACAACGACACCAACTTCAACAC
ATCTCACATCTTCGAATACTCTGCAGCACTGGATCCCAACAAGACTCTGC
ATTCGATCACCCTGCCAGTCACTACCAACACAACCACCGGCAGACTGCAT
ATTTTTTCCGTATCCCTGTGGAAATCCACCGCCCCATCAGCCCAAGTGCA
ATTCGTGCGCCCGACCCAAAAGTGGACAGAAAGCGGCAACCAGATAGTCG
AAGTGACCATCAACAACCCAGGCAGCAGCTGCATCGCAGGACCTGGAGTC
AACTTATCATTATCCATGCCTGGAATCCGAACCCTAGAGCCCGCAAACGT
CAAACGACTCTGTCCCGGCGACCAGAAACGCGTCAACATCGGCATCAACG
GCACGGCGAACGGAACAGCAACCGTTATCCTCAACTACACCCACTCCATC
CAGCACCAAACCTACCCTCACCCCCTCTCCCTCGGCCTAACAGAATGGAC
CTCAGACCTGTCTAGCCTCTCACAACATGAAAGCCCTGAATGGTTCGACG
ACGCCAAATTCGGCATCATGATCCACTGGGGTCCCTACTCCGTCCCCGGC
TGGGGCAACTCGACTCCCTACGAAAGCTACGCCGAGTGGTTCTGGTGGTA
CACCACGCACCGTGCCGCCGACAAATCCGACACCTACGACTACCGGCTGC
GCACCTTCGGGCCCACCTGGAACTACGACGACTCGTTCCCCTCCTTCACA
GCAGCTAACTTCTCCCCGAAAGCCTGGGTCGACCTCATCTCAGCCTCGGG
GGCCAAATACTTCGTGCTAACAACCAAACACCACGACGGGTTCGCCCTCT
TCGACACGCAAAACACCACCAACCGCTCCTCCCTCCACTACGGCCCGCAC
CGGGACCTCGTGTCAGAACTCTTCACCGCGTCCTCAATCCACCACCCCAC
CCTAAAACGCGGCACCTACTTCTCCCTCCCAGAATGGTTCAATCCAGACT
TCAGGCCCTACGGGTTCGCCGAACTCCCGGGGAACACCTCCACCAGCTGG
CCAGGCATCATCGCCCGCAACCCCTACACTGGCCTGAATGAACCCTACAC
AGGCCGCATCCCCGTCACGGATTTCATCACAGACGTAATGGTTCCCCAAA
TGACCATTCTAGCTCACAATTACAGCACAGACATCATGTGGTGTGACTGC
GGGGCCGCGAACGGGACTGCGTCTTTCGCTAGCGAATGGTTCAATTCCGC
GCGTGCAGATAATCGCCAAGTGGCAATTAATTCGCGGTGCGGGGTCGCGG
AAGTGTCCGACTTCGATACGCCCGAGTATGCGACGTTTAGCTCGGCGCAG
TTGCGCAAGTGGGAGAGTAATATGGGCATGGATCCGTATAGTTATGGGTT
TAATCGGGCGACTGCGGAAAGAAGTTATATGAATGCTAGTACGGTGGTCA
GGGATCTGGTGGATATGGTGAGTAAGAATGGGAATTTTTTGTTGGATGTT
GGGCCGCGCGCGGATGGGAGTATTGTCGAGAGGGAGGAGAGGGAGTTGAG
GAGGGCTGGGGAGTGGATTCGAGGACATGGGGAGGCGGTGTTTGGGACGA
GGGTTTGGTGGGTGAGGAGTGAGGCGGTTGGTGTGACAGGTGATGGTGGG
GATGTCGGGGTGAGGTTTACGCAGACGAATGAGGCGTTTTATTTGTTGTT
TCTGGGGGATCCGGGGAAGAAGGTGTTTGTGGATGCGTCGGTGCCGTTGT
TGAGGGGGGATAGAGTTGTTGTGGTGGGTGGCGATGGGGAAAGGGAGGTA
GAGGTTGAGTGGGAGGGGAGTGCGACGGAGGGATTTACGTTTAGGGTTCC
TGAGGGGGTATGGGATGGAGAGGAGTTTTGCTGGGTGTTGAAGGTTGTGT
ATCTTGCTTAGATGAAGCTCGTTACCCAGATAGCCATCGCATGGCAGTTA
GCTGTCACTGCAGCTGCAGTAACGCAGTCGGAATTCGTCTCCCTCGATTC
GTACTTCAACAACAAGGCATTTGGCGTATATCCCGGCCAGACGTCCTTTG
ATGCGTTGAATCAGTCCTATCCAGACCCCAGCATTATTGGCATCAATGGA
ACCTACACCTCCACGCACACTGGTGTTGTCTACGACTTTCCGGGCTATCG
TGGGCCCGACCTCCCTGACAATGTTGTCTGTGAAGGCCAGACAATCAATG
TGCCTCGCGACCAGTACTTCTCAGCATCCATGTTGGTAACATCCGACGTT
CAGCTGTCCACCGTGTCGGGGAATGTGACATACACGTATTCAGACGACTC
GACACTTGTCTCCGAGCTGCGCAGTCTACCCTGGTGGGCATTCCTGACAA
TCAATCGCGGCGAGATCATCTTCCCCTACCGGTACACTCACAACGACACC
AACTTCAACACATCTCACATCTTCGAATACTCTGCAGCACTGGATCCCAA
CAAGACTCTGCATTCGATCACCCTGCCAGTCACTACCAACACAACCACCG
GCAGACTGCATATTTTTTCCGTATCCCTGTGGAAATCCACCGCCCCATCA
GCCCAAGTGCAATTCGTGCGCCCGACCCAAAAGTGGACAGAAAGCGGCAA
CCAGATAGTCGAAGTGACCATCAACAACCCAGGCAGCAGCTGCATCGCAG
GACCTGGAGTCAACTTATCATTATCCATGCCTGGAATCCGAACCCTAGAG
CCCGCAAACGTCAAACGACTCTGTCCCGGCGACCAGAAACGCGTCAACAT
CGGCATCAACGGCACGGCGAACGGAACAGCAACCGTTATCCTCAACTACA
CCCACTCCATCCAGCACCAAACCTACCCTCACCCCCTCTCCCTCGGCCTA
ACAGAATGGACCTCAGACCTGTCTAGCCTCTCACAACATGAAAGCCCTGA
ATGGTTCGACGACGCCAAATTCGGCATCATGATCCACTGGGGTCCCTACT
CCGTCCCCGGCTGGGGCAACTCGACTCCCTACGAAAGCTACGCCGAGTGG
TTCTGGTGGTACACCACGCACCGTGCCGCCGACAAATCCGACACCTACGA
CTACCGGCTGCGCACCTTCGGGCCCACCTGGAACTACGACGACTCGTTCC
CCTCCTTCACAGCAGCTAACTTCTCCCCGAAAGCCTGGGTCGACCTCATC
TCAGCCTCGGGGGCCAAATACTTCGTGCTAACAACCAAACACCACGACGG
GTTCGCCCTCTTCGACACGCAAAACACCACCAACCGCTCCTCCCTCCACT
ACGGCCCGCACCGGGACCTCGTGTCAGAACTCTTCACCGCGTCCTCAATC
CACCACCCCACCCTAAAACGCGGCACCTACTTCTCCCTCCCAGAATGGTT
CAATCCAGACTTCAGGCCCTACGGGTTCGCCGAACTCCCGGGGAACACCT
CCACCAGCTGGCCAGGCATCATCGCCCGCAACCCCTACACTGGCCTGAAT
GAACCCTACACAGGCCGCATCCCCGTCACGGATTTCATCACAGACGTAAT
GGTTCCCCAAATGACCATTCTAGCTCACAATTACAGCACAGACATCATGT
GGTGTGACTGCGGGGCCGCGAACGGGACTGCGTCTTTCGCTAGCGAATGG
TTCAATTCCGCGCGTGCAGATAATCGCCAAGTGGCAATTAATTCGCGGTG
CGGGGTCGCGGAAGTGTCCGACTTCGATACGCCCGAGTATGCGACGTTTA
GCTCGGCGCAGTTGCGCAAGTGGGAGAGTAATATGGGCATGGATCCGTAT
AGTTATGGGTTTAATCGGGCGACTGCGGAAAGAAGTTATATGAATGCTAG
TACGGTGGTCAGGGATCTGGTGGATATGGTGAGTAAGAATGGGAATTTTT
TGTTGGATGTTGGGCCGCGCGCGGATGGGAGTATTGTCGAGAGGGAGGAG
AGGGAGTTGAGGAGGGCTGGGGAGTGGATTCGAGGACATGGGGAGGCGGT
GTTTGGGACGAGGGTTTGGTGGGTGAGGAGTGAGGCGGTTGGTGTGACAG
GTGATGGTGGGGATGTCGGGGTGAGGTTTACGCAGACGAATGAGGCGTTT
TATTTGTTGTTTCTGGGGGATCCGGGGAAGAAGGTGTTTGTGGATGCGTC
GGTGCCGTTGTTGAGGGGGGATAGAGTTGTTGTGGTGGGTGGCGATGGGG
AAAGGGAGGTAGAGGTTGAGTGGGAGGGGAGTGCGACGGAGGGATTTACG
TTTAGGGTTCCTGAGGGGGTATGGGATGGAGAGGAGTTTTGCTGGGTGTT
GAAGGTTGTGTATCTTGCTTAGATGAAGCTCGTTACCCAGATAGCCATCG
CATGGCAGTTAGCTGTCACTGCAGCTGCAGTAACGCAGTCGGAATTCGTC
TCCCTCGATTCGTACTTCAACAACAAGGCATTTGGCGTATATCCCGGCCA
GACGTCCTTTGATGCGTTGAATCAGTCCTATCCAGACCCCAGCATTATTG
GCATCAATGGAACCTACACCTCCACGCACACTGGTGTTGTCTACGACTTT
CCGGGCTATCGTGGGCCCGACCTCCCTGACAATGTTGTCTGTGAAGGCCA
GACAATCAATGTGCCTCGCGACCAGTACTTCTCAGCATCCATGTTGGTAA
CATCCGACGTTCAGCTGTCCACCGTGTCGGGGAATGTGACATACACGTAT
TCAGACGACTCGACACTTGTCTCCGAGCTGCGCAGTCTACCCTGGTGGGC
ATTCCTGACAATCAATCGCGGCGAGATCATCTTCCCCTACCGGTACACTC
ACAACGACACCAACTTCAACACATCTCACATCTTCGAATACTCTGCAGCA
CTGGATCCCAACAAGACTCTGCATTCGATCACCCTGCCAGTCACTACCAA
CACAACCACCGGCAGACTGCATATTTTTTCCGTATCCCTGTGGAAATCCA
CCGCCCCATCAGCCCAAGTGCAATTCGTGCGCCCGACCCAAAAGTGGACA
GAAAGCGGCAACCAGATAGTCGAAGTGACCATCAACAACCCAGGCAGCAG
CTGCATCGCAGGACCTGGAGTCAACTTATCATTATCCATGCCTGGAATCC
GAACCCTAGAGCCCGCAAACGTCAAACGACTCTGTCCCGGCGACCAGAAA
CGCGTCAACATCGGCATCAACGGCACGGCGAACGGAACAGCAACCGTTAT
CCTCAACTACACCCACTCCATCCAGCACCAAACCTACCCTCACCCCCTCT
CCCTCGGCCTAACAGAATGGACCTCAGACCTGTCTAGCCTCTCACAACAT
GAAAGCCCTGAATGGTTCGACGACGCCAAATTCGGCATCATGATCCACTG
GGGTCCCTACTCCGTCCCCGGCTGGGGCAACTCGACTCCCTACGAAAGCT
ACGCCGAGTGGTTCTGGTGGTACACCACGCACCGTGCCGCCGACAAATCC
GACACCTACGACTACCGGCTGCGCACCTTCGGGCCCACCTGGAACTACGA
CGACTCGTTCCCCTCCTTCACAGCAGCTAACTTCTCCCCGAAAGCCTGGG
TCGACCTCATCTCAGCCTCGGGGGCCAAATACTTCGTGCTAACAACCAAA
CACCACGACGGGTTCGCCCTCTTCGACACGCAAAACACCACCAACCGCTC
CTCCCTCCACTACGGCCCGCACCGGGACCTCGTGTCAGAACTCTTCACCG
CGTCCTCAATCCACCACCCCACCCTAAAACGCGGCACCTACTTCTCCCTC
CCAGAATGGTTCAATCCAGACTTCAGGCCCTACGGGTTCGCCGAACTCCC
GGGGAACACCTCCACCAGCTGGCCAGGCATCATCGCCCGCAACCCCTACA
CTGGCCTGAATGAACCCTACACAGGCCGCATCCCCGTCACGGATTTCATC
ACAGACGTAATGGTTCCCCAAATGACCATTCTAGCTCACAATTACAGCAC
AGACATCATGTGGTGTGACTGCGGGGCCGCGAACGGGACTGCGTCTTTCG
CTAGCGAATGGTTCAATTCCGCGCGTGCAGATAATCGCCAAGTGGCAATT
AATTCGCGGTGCGGGGTCGCGGAAGTGTCCGACTTCGATACGCCCGAGTA
TGCGACGTTTAGCTCGGCGCAGTTGCGCAAGTGGGAGAGTAATATGGGCA
TGGATCCGTATAGTTATGGGTTTAATCGGGCGACTGCGGAAAGAAGTTAT
ATGAATGCTAGTACGGTGGTCAGGGATCTGGTGGATATGGTGAGTAAGAA
TGGGAATTTTTTGTTGGATGTTGGGCCGCGCGCGGATGGGAGTATTGTCG
AGAGGGAGGAGAGGGAGTTGAGGAGGGCTGGGGAGTGGATTCGAGGACAT
GGGGAGGCGGTGTTTGGGACGAGGGTTTGGTGGGTGAGGAGTGAGGCGGT
TGGTGTGACAGGTGATGGTGGGGATGTCGGGGTGAGGTTTACGCAGACGA
ATGAGGCGTTTTATTTGTTGTTTCTGGGGGATCCGGGGAAGAAGGTGTTT
GTGGATGCGTCGGTGCCGTTGTTGAGGGGGGATAGAGTTGTTGTGGTGGG
TGGCGATGGGGAAAGGGAGGTAGAGGTTGAGTGGGAGGGGAGTGCGACGG
AGGGATTTACGTTTAGGGTTCCTGAGGGGGTATGGGATGGAGAGGAGTTT
TGCTGGGTGTTGAAGGTTGTGTATCTTGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004560 | alpha-L-fucosidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
| GO:0006004 | fucose metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001746-T1.utr5p1 | KJC3_001746-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH29 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR000933 |
| DBxref | InterPro:IPR016286 |
| DBxref | PFAM:PF01120 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:567140..569777 + |
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