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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:569700..571795- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001747-T2 ID=KJC3_001747-T2|Name=KJC3_001747-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2096bp|location=Sequence derived from alignment at ch2:569700..571795- (Aspergillus niger KJC3)
GCCTCCTTCCTTCCATTACGCCCCCTAAACAGACGCAGGCCACGACGACG
GCCCGGGACACACTTCCACCTGTAACCGCCCCTCATTTCGTATGTGCCAC
GTACATGCATGCCATCTTCTCCGAAAATGTCGGTTGGGAATCACCGTCCC
TCTGGTTGCTTTCAGTGTAAAGGTACGGACCTGAACATGAAGAATTCTCG
AGGCGGGCATATTGACGCCGGATGCAGCACTTGGCCTGCGCTGCATTGGA
GATCTCCCCCGCTGTACACGATGCAGAACTCTGGATTTGACGTGCGAGGA
GTTTACGTTTGTGGAGGAACCCGTGGAGCAAGGAATTAGCCTAGGCCGTA
GAGGTGGGTTTCACCAGATGAGCGTTATTGGCATTATCATAGGTATGGCT
CATGATTGTCCATAGGAACGTGGTCAAAACAACAGAGAAGTATTCTAGAT
CTACCCGCCTCTAAGCCCGCTCATCGAGAGATGGTATCGCTGGACGAGTA
CAGTGGCCGGTGGGTATTCCTTAATCTCACTGTGAAGAATTACCTCGAGG
ACACAGGCGAGGTAGACTATGATTCCGACAATGAGGACACAGTCATGCAG
GACTTGTCTGGTGAATCGGATGATGCGCTTCAACTACGCTCTGTCCTAAG
CCATCCGCTTTCCGAATACTCCCATTCTGAGAGTTATCTGCTCCAATACT
TTATTCAGAGTATCGGGCCGGATTGTTCGCTCAGCAGCATTGACAACCCA
TACATCACTTTGCTGACACCACTTGCTTTCTGCCATCCAGCTCTCCGGAA
TGCCATGGTGTCTGTAGCAGCTAATCAGCTTCGCTTACTTGGTGATGCCC
GATATGCCAACGAGGCGGCACTTTACAAGAATAGAGCGATACAGGGATTG
CAGCAGGCAGTCGAGCTCCAGAATATAGATGATGGAATAATAGGCACTAT
TCTGATGTTGTGCTTTTACGATGTACGTGATATTGTGGACATTGGCTTTA
ACAACTGCTGACATGGCAACTTACAGATATCGGATAAATGCGATTCATCT
TGGGTAAAACATCTCGAAGCAGGTCTGGACCTCTTGGACTGCCTTCCTTG
TAGTGCTTCGTCAAGCCAGGGGTTGCGAAGGTTTTTCCAAATGTATTTTG
TCGCCCACGCTATCATGCGTCGGACGGCATCGCCAGGAATGATGTATGAA
AATGGGCGATATGGTTGGTCAGAAAACGATAATCTTGATGAGGTTTGTCC
CACATGAACTTCGTCGATTCCGAATCTAATCTTTTGTTAGATTGATACAA
TAATGGGCTGCTCACGGCGACTCATGGGGATGATCAATGACATTTCTGAT
CTACCTTCCGATGAGCATATGGTAAACGTACATCTCCTCAGCTTTCAACT
CAGCAAATCGACACGCGTCTAATGCTCCACAGAAAACCATAAACGCTGGG
CCAGCCGATACCTACATATCAAGAGCAAATCGCCTTGCTTGCTCCCTCAT
CAACCTCACCCAGACCCTCCCACCCCACCTACAACACAGAGAAGATATAG
CTCGAATCGCCGAAACGAAGCGTCTAGCAGCATTACTGTACTTGATCGAG
CGGGTCGGCTCCACTACCTATCGCAGGCAATTCATCCCAAGAACGGATAA
GCGCACATTAGTGAATAAGATGATTGATCTCATCCAGAGTCTTCCTGATT
CTGCTACTTTACTGTGGCCGTTATACGTTCTCGGGCAGACCGCACTGGAT
GATCAGGATCATCGCCGGTTCGTGATGGATCGACTAGAGCGGATAGAACG
GACACGGAACCTAGGGAGTGTCCGACGAGCCAGGACAGCGATGAAAGATA
CGTTTCGGATTATGGATATGCGATATACGGTTCGACGGAGGGATGGGAGG
TTTGAAAATATTAGTCTGGCTTGACCGTTACCGTGAGGTGATATTAGAGA
AGCTCCATGCATGCTCGTCATTCCTCTATCCCAATGTACCACATAGCTCT
ACCCCATCACAGGCACAACTAAGCAAGATACACAACCTTCAACACCCAGC
AAAACTCCTCTCCATCCCATACCCCCTCAGGAACCCTAAACGTAAA back to topCoding sequence (CDS) from alignment at ch2:569700..571795- >KJC3_001747-T2 ID=KJC3_001747-T2|Name=KJC3_001747-T2|organism=Aspergillus niger KJC3|type=CDS|length=5148bp|location=Sequence derived from alignment at ch2:569700..571795- (Aspergillus niger KJC3)
AAAACCATAAACGCTGGGCCAGCCGATACCTACATATCAAGAGCAAATCG
CCTTGCTTGCTCCCTCATCAACCTCACCCAGACCCTCCCACCCCACCTAC
AACACAGAGAAGATATAGCTCGAATCGCCGAAACGAAGCGTCTAGCAGCA
TTACTGTACTTGATCGAGCGGGTCGGCTCCACTACCTATCGCAGGCAATT
CATCCCAAGAACGGATAAGCGCACATTAGTGAATAAGATGATTGATCTCA
TCCAGAGTCTTCCTGATTCTGCTACTTTACTGTGGCCGTTATACGTTCTC
GGGCAGACCGCACTGGATGATCAGGATCATCGCCGGTTCGTGATGGATCG
ACTAGAGCGGATAGAACGGACACGGAACCTAGGGAGTGTCCGACGAGCCA
GGACAGCGATGAAAGATACGTTTCGGATTATGGATATGCGATATACGGTT
CGACGGAGGGATGGGAGGTTTGAAAATATTAGTCTGGCTTGAATTGATAC
AATAATGGGCTGCTCACGGCGACTCATGGGGATGATCAATGACATTTCTG
ATCTACCTTCCGATGAGCATATGGTAAACATATCGGATAAATGCGATTCA
TCTTGGGTAAAACATCTCGAAGCAGGTCTGGACCTCTTGGACTGCCTTCC
TTGTAGTGCTTCGTCAAGCCAGGGGTTGCGAAGGTTTTTCCAAATGTATT
TTGTCGCCCACGCTATCATGCGTCGGACGGCATCGCCAGGAATGATGTAT
GAAAATGGGCGATATGGTTGGTCAGAAAACGATAATCTTGATGAGATGGT
ATCGCTGGACGAGTACAGTGGCCGGTGGGTATTCCTTAATCTCACTGTGA
AGAATTACCTCGAGGACACAGGCGAGGTAGACTATGATTCCGACAATGAG
GACACAGTCATGCAGGACTTGTCTGGTGAATCGGATGATGCGCTTCAACT
ACGCTCTGTCCTAAGCCATCCGCTTTCCGAATACTCCCATTCTGAGAGTT
ATCTGCTCCAATACTTTATTCAGAGTATCGGGCCGGATTGTTCGCTCAGC
AGCATTGACAACCCATACATCACTTTGCTGACACCACTTGCTTTCTGCCA
TCCAGCTCTCCGGAATGCCATGGTGTCTGTAGCAGCTAATCAGCTTCGCT
TACTTGGTGATGCCCGATATGCCAACGAGGCGGCACTTTACAAGAATAGA
GCGATACAGGGATTGCAGCAGGCAGTCGAGCTCCAGAATATAGATGATGG
AATAATAGGCACTATTCTGATGTTGTGCTTTTACGATAAAACCATAAACG
CTGGGCCAGCCGATACCTACATATCAAGAGCAAATCGCCTTGCTTGCTCC
CTCATCAACCTCACCCAGACCCTCCCACCCCACCTACAACACAGAGAAGA
TATAGCTCGAATCGCCGAAACGAAGCGTCTAGCAGCATTACTGTACTTGA
TCGAGCGGGTCGGCTCCACTACCTATCGCAGGCAATTCATCCCAAGAACG
GATAAGCGCACATTAGTGAATAAGATGATTGATCTCATCCAGAGTCTTCC
TGATTCTGCTACTTTACTGTGGCCGTTATACGTTCTCGGGCAGACCGCAC
TGGATGATCAGGATCATCGCCGGTTCGTGATGGATCGACTAGAGCGGATA
GAACGGACACGGAACCTAGGGAGTGTCCGACGAGCCAGGACAGCGATGAA
AGATACGTTTCGGATTATGGATATGCGATATACGGTTCGACGGAGGGATG
GGAGGTTTGAAAATATTAGTCTGGCTTGAATTGATACAATAATGGGCTGC
TCACGGCGACTCATGGGGATGATCAATGACATTTCTGATCTACCTTCCGA
TGAGCATATGGTAAACATATCGGATAAATGCGATTCATCTTGGGTAAAAC
ATCTCGAAGCAGGTCTGGACCTCTTGGACTGCCTTCCTTGTAGTGCTTCG
TCAAGCCAGGGGTTGCGAAGGTTTTTCCAAATGTATTTTGTCGCCCACGC
TATCATGCGTCGGACGGCATCGCCAGGAATGATGTATGAAAATGGGCGAT
ATGGTTGGTCAGAAAACGATAATCTTGATGAGATGGTATCGCTGGACGAG
TACAGTGGCCGGTGGGTATTCCTTAATCTCACTGTGAAGAATTACCTCGA
GGACACAGGCGAGGTAGACTATGATTCCGACAATGAGGACACAGTCATGC
AGGACTTGTCTGGTGAATCGGATGATGCGCTTCAACTACGCTCTGTCCTA
AGCCATCCGCTTTCCGAATACTCCCATTCTGAGAGTTATCTGCTCCAATA
CTTTATTCAGAGTATCGGGCCGGATTGTTCGCTCAGCAGCATTGACAACC
CATACATCACTTTGCTGACACCACTTGCTTTCTGCCATCCAGCTCTCCGG
AATGCCATGGTGTCTGTAGCAGCTAATCAGCTTCGCTTACTTGGTGATGC
CCGATATGCCAACGAGGCGGCACTTTACAAGAATAGAGCGATACAGGGAT
TGCAGCAGGCAGTCGAGCTCCAGAATATAGATGATGGAATAATAGGCACT
ATTCTGATGTTGTGCTTTTACGATAAAACCATAAACGCTGGGCCAGCCGA
TACCTACATATCAAGAGCAAATCGCCTTGCTTGCTCCCTCATCAACCTCA
CCCAGACCCTCCCACCCCACCTACAACACAGAGAAGATATAGCTCGAATC
GCCGAAACGAAGCGTCTAGCAGCATTACTGTACTTGATCGAGCGGGTCGG
CTCCACTACCTATCGCAGGCAATTCATCCCAAGAACGGATAAGCGCACAT
TAGTGAATAAGATGATTGATCTCATCCAGAGTCTTCCTGATTCTGCTACT
TTACTGTGGCCGTTATACGTTCTCGGGCAGACCGCACTGGATGATCAGGA
TCATCGCCGGTTCGTGATGGATCGACTAGAGCGGATAGAACGGACACGGA
ACCTAGGGAGTGTCCGACGAGCCAGGACAGCGATGAAAGATACGTTTCGG
ATTATGGATATGCGATATACGGTTCGACGGAGGGATGGGAGGTTTGAAAA
TATTAGTCTGGCTTGAATTGATACAATAATGGGCTGCTCACGGCGACTCA
TGGGGATGATCAATGACATTTCTGATCTACCTTCCGATGAGCATATGGTA
AACATATCGGATAAATGCGATTCATCTTGGGTAAAACATCTCGAAGCAGG
TCTGGACCTCTTGGACTGCCTTCCTTGTAGTGCTTCGTCAAGCCAGGGGT
TGCGAAGGTTTTTCCAAATGTATTTTGTCGCCCACGCTATCATGCGTCGG
ACGGCATCGCCAGGAATGATGTATGAAAATGGGCGATATGGTTGGTCAGA
AAACGATAATCTTGATGAGATGGTATCGCTGGACGAGTACAGTGGCCGGT
GGGTATTCCTTAATCTCACTGTGAAGAATTACCTCGAGGACACAGGCGAG
GTAGACTATGATTCCGACAATGAGGACACAGTCATGCAGGACTTGTCTGG
TGAATCGGATGATGCGCTTCAACTACGCTCTGTCCTAAGCCATCCGCTTT
CCGAATACTCCCATTCTGAGAGTTATCTGCTCCAATACTTTATTCAGAGT
ATCGGGCCGGATTGTTCGCTCAGCAGCATTGACAACCCATACATCACTTT
GCTGACACCACTTGCTTTCTGCCATCCAGCTCTCCGGAATGCCATGGTGT
CTGTAGCAGCTAATCAGCTTCGCTTACTTGGTGATGCCCGATATGCCAAC
GAGGCGGCACTTTACAAGAATAGAGCGATACAGGGATTGCAGCAGGCAGT
CGAGCTCCAGAATATAGATGATGGAATAATAGGCACTATTCTGATGTTGT
GCTTTTACGATAAAACCATAAACGCTGGGCCAGCCGATACCTACATATCA
AGAGCAAATCGCCTTGCTTGCTCCCTCATCAACCTCACCCAGACCCTCCC
ACCCCACCTACAACACAGAGAAGATATAGCTCGAATCGCCGAAACGAAGC
GTCTAGCAGCATTACTGTACTTGATCGAGCGGGTCGGCTCCACTACCTAT
CGCAGGCAATTCATCCCAAGAACGGATAAGCGCACATTAGTGAATAAGAT
GATTGATCTCATCCAGAGTCTTCCTGATTCTGCTACTTTACTGTGGCCGT
TATACGTTCTCGGGCAGACCGCACTGGATGATCAGGATCATCGCCGGTTC
GTGATGGATCGACTAGAGCGGATAGAACGGACACGGAACCTAGGGAGTGT
CCGACGAGCCAGGACAGCGATGAAAGATACGTTTCGGATTATGGATATGC
GATATACGGTTCGACGGAGGGATGGGAGGTTTGAAAATATTAGTCTGGCT
TGAATTGATACAATAATGGGCTGCTCACGGCGACTCATGGGGATGATCAA
TGACATTTCTGATCTACCTTCCGATGAGCATATGGTAAACATATCGGATA
AATGCGATTCATCTTGGGTAAAACATCTCGAAGCAGGTCTGGACCTCTTG
GACTGCCTTCCTTGTAGTGCTTCGTCAAGCCAGGGGTTGCGAAGGTTTTT
CCAAATGTATTTTGTCGCCCACGCTATCATGCGTCGGACGGCATCGCCAG
GAATGATGTATGAAAATGGGCGATATGGTTGGTCAGAAAACGATAATCTT
GATGAGATGGTATCGCTGGACGAGTACAGTGGCCGGTGGGTATTCCTTAA
TCTCACTGTGAAGAATTACCTCGAGGACACAGGCGAGGTAGACTATGATT
CCGACAATGAGGACACAGTCATGCAGGACTTGTCTGGTGAATCGGATGAT
GCGCTTCAACTACGCTCTGTCCTAAGCCATCCGCTTTCCGAATACTCCCA
TTCTGAGAGTTATCTGCTCCAATACTTTATTCAGAGTATCGGGCCGGATT
GTTCGCTCAGCAGCATTGACAACCCATACATCACTTTGCTGACACCACTT
GCTTTCTGCCATCCAGCTCTCCGGAATGCCATGGTGTCTGTAGCAGCTAA
TCAGCTTCGCTTACTTGGTGATGCCCGATATGCCAACGAGGCGGCACTTT
ACAAGAATAGAGCGATACAGGGATTGCAGCAGGCAGTCGAGCTCCAGAAT
ATAGATGATGGAATAATAGGCACTATTCTGATGTTGTGCTTTTACGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001747-T2.utr3p1 | KJC3_001747-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:569700..571795 - |
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