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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:584836..586949- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001752-T1 ID=KJC3_001752-T1|Name=KJC3_001752-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2114bp|location=Sequence derived from alignment at ch2:584836..586949- (Aspergillus niger KJC3)
ATGACTGTCAAGCAACCCCCAATCCGACGCATCGACCGGGCCGACGTGGA
GGCCATCATCCAAGCTATCATCGAGGATGGCTGCTGTATCATCAAGGATT
TCACCGATGTAGCGACTGTAAAGCAGGTTAATGAGGAGGTACAGTCCTAC
CTTGATGCCGACAAGCCATGGAAGGTAGGTGGACTGTCCGGTCTAATCCT
TGCATGTCTAACAACATCCAGGGTGACCTCTTCCCACCCGAAACCCGCCG
CTGTGCGAACCTCGCAGGTCGCAGCAAGACTGCCCGGGAGAACTGGCTGA
TTGACCCGCTTATTCGTACGTTAACAGCAAGATTCGTTGACAAGACGACT
TCCAACTTCTACGGAGAAACGAAGCATACGTATACCAGCGAGGCGATATG
CTCGATCGCGATGACTTTCGACATTGGCCCTGGCGCGAAGGCACAGCGGC
TTCATCGTGACGACAAGAATTTTCATGTTGATCATGAAGAGCAGAGCGCT
ACGGGCTATCGGGTGGGCTCGGATGTGATGATGGCCTTCATGGTTCCCGG
GATCAAGACAACAGTCGAGAATGGTGCCACCATCGCTATCCCCGGTAGTC
ACCTGTGGGGATCCGACCGGGCACCCAAGCTGGATGAGGCCGTGGCGGCG
GAGATGAATGTGACCGACTGCTGGGTGATGCTGGGAGGACTGTATCATGC
AGGGGGTGCGAATGTCACACAAAACGAACGACGGGTGGTACATGGCATGT
TCTTCACGCGCGGATTCCATCGACAGGAGGAAAATGTTTATCTTGCCAAC
ACAGCTGAAGAAGTTCTATCTTGGTCTCCGGAGGCTCAGAAGGTGATGGG
ATACGAGGTATCTAGTCCCAACATTGGCTTTGTTAACTTCCAGACCCCGC
TTCAATATTTGCGCGGAGAGGGAGTCGGGGACGCATTTGTGGACTTTGAC
CCTTCCCAGGAGCAACCTAAATGAGTGGCCACTGATCCCAGCTGCGTAAT
GTGTCGTTGCACTGCAGCCATTAGTACAAGTGGTTTTTGAAGCCCAGTTA
GTCTCCGGTTTGAAATAACACTTCTGAGATTATTCCTGATCGGCTTTGGG
TATAGCGCCTTCTGAACAGGCCGCTGTCACTGAAAGCGACAGTATGCGAA
AGAGTAGCCAGAGTTGAGACGTGAGTACACGTAAGCCATTCATCTGGGAG
ACAGTCTCACTTAGATTAGCACATGCCAACTGGTAGAGAAGTCTAGAAGG
CGTGAGATCGTGCCACGACAGCTATGTGTCCGACTAGTGTCAAAATGGAC
GACATAGGCATCCCTGTTCAGGTCTTGCTCCCACAACATCTCAGTGAAAC
CCGAGAAACCCCAGGTAACCGGGCACCGGGTAGCTGGAAATTCTTGGCTT
CGTGATGCCCATGTCGACATGTACAAGGCAACAGACCGCAGGAGTGAGGC
GGTCGGTCTCCGTATCACCAACTCAAGGCATCCTTCCACCTGTCTTGGGG
ACGTTCTCAATGACTTTGCCACTCGCCAACTCGGTGGATAGGCAACCGCC
GCATGACCGACATTCGCATCGGAACGATCCGACAGATGCGTCCCAACGTG
CAACGGGTGAACGGGGAAACTACAGGAAGGCACATGGTATGACGCCTCTG
CAGAGACGAGCCGTGGGAAATGCATCCGTTACGCATTGAGGTGAGGGGTT
GTAGCGTTCATTGGCCTGCCGCGAGTTTTAGGTTACCACGCTAATCAAGT
GGATTGTTCTGGACTCAAGTGTTTTTGTAGTAGACACTTTTACCCGTCCA
TAGTGGCTTTTTAATCTGACAATCGCCAATTGCAAGGTTTCAGATGTGAT
ATAACTGCCAGTGATCGAGGAAGATTTTGGTATCGCTAAGATTCTCGTCA
GATGCCACGATTGCAGGGACGATGGGCAGGGAACGTTCGAAAAGACATGC
GACGGGCTTTGAGAGCAGACACCGAGGGGAAATCGCATGTAATACAAGTA
GCCCCTTCTGTGCTAACGGAATCAGTCATAGAGCATTGGCCTTGAGTACC
AGGAGAGGATGGATCACGAGCCGGGTAAACGTTGGCGGTCAGACTCAATG
GCACCACTTTGTCC back to topCoding sequence (CDS) from alignment at ch2:584836..586949- >KJC3_001752-T1 ID=KJC3_001752-T1|Name=KJC3_001752-T1|organism=Aspergillus niger KJC3|type=CDS|length=1854bp|location=Sequence derived from alignment at ch2:584836..586949- (Aspergillus niger KJC3)
GGTGACCTCTTCCCACCCGAAACCCGCCGCTGTGCGAACCTCGCAGGTCG
CAGCAAGACTGCCCGGGAGAACTGGCTGATTGACCCGCTTATTCGTACGT
TAACAGCAAGATTCGTTGACAAGACGACTTCCAACTTCTACGGAGAAACG
AAGCATACGTATACCAGCGAGGCGATATGCTCGATCGCGATGACTTTCGA
CATTGGCCCTGGCGCGAAGGCACAGCGGCTTCATCGTGACGACAAGAATT
TTCATGTTGATCATGAAGAGCAGAGCGCTACGGGCTATCGGGTGGGCTCG
GATGTGATGATGGCCTTCATGGTTCCCGGGATCAAGACAACAGTCGAGAA
TGGTGCCACCATCGCTATCCCCGGTAGTCACCTGTGGGGATCCGACCGGG
CACCCAAGCTGGATGAGGCCGTGGCGGCGGAGATGAATGTGACCGACTGC
TGGGTGATGCTGGGAGGACTGTATCATGCAGGGGGTGCGAATGTCACACA
AAACGAACGACGGGTGGTACATGGCATGTTCTTCACGCGCGGATTCCATC
GACAGGAGGAAAATGTTTATCTTGCCAACACAGCTGAAGAAGTTCTATCT
TGGTCTCCGGAGGCTCAGAAGGTGATGGGATACGAGGTATCTAGTCCCAA
CATTGGCTTTGTTAACTTCCAGACCCCGCTTCAATATTTGCGCGGAGAGG
GAGTCGGGGACGCATTTGTGGACTTTGACCCTTCCCAGGAGCAACCTAAA
TGAATGACTGTCAAGCAACCCCCAATCCGACGCATCGACCGGGCCGACGT
GGAGGCCATCATCCAAGCTATCATCGAGGATGGCTGCTGTATCATCAAGG
ATTTCACCGATGTAGCGACTGTAAAGCAGGTTAATGAGGAGGTACAGTCC
TACCTTGATGCCGACAAGCCATGGAAGGGTGACCTCTTCCCACCCGAAAC
CCGCCGCTGTGCGAACCTCGCAGGTCGCAGCAAGACTGCCCGGGAGAACT
GGCTGATTGACCCGCTTATTCGTACGTTAACAGCAAGATTCGTTGACAAG
ACGACTTCCAACTTCTACGGAGAAACGAAGCATACGTATACCAGCGAGGC
GATATGCTCGATCGCGATGACTTTCGACATTGGCCCTGGCGCGAAGGCAC
AGCGGCTTCATCGTGACGACAAGAATTTTCATGTTGATCATGAAGAGCAG
AGCGCTACGGGCTATCGGGTGGGCTCGGATGTGATGATGGCCTTCATGGT
TCCCGGGATCAAGACAACAGTCGAGAATGGTGCCACCATCGCTATCCCCG
GTAGTCACCTGTGGGGATCCGACCGGGCACCCAAGCTGGATGAGGCCGTG
GCGGCGGAGATGAATGTGACCGACTGCTGGGTGATGCTGGGAGGACTGTA
TCATGCAGGGGGTGCGAATGTCACACAAAACGAACGACGGGTGGTACATG
GCATGTTCTTCACGCGCGGATTCCATCGACAGGAGGAAAATGTTTATCTT
GCCAACACAGCTGAAGAAGTTCTATCTTGGTCTCCGGAGGCTCAGAAGGT
GATGGGATACGAGGTATCTAGTCCCAACATTGGCTTTGTTAACTTCCAGA
CCCCGCTTCAATATTTGCGCGGAGAGGGAGTCGGGGACGCATTTGTGGAC
TTTGACCCTTCCCAGGAGCAACCTAAATGAATGACTGTCAAGCAACCCCC
AATCCGACGCATCGACCGGGCCGACGTGGAGGCCATCATCCAAGCTATCA
TCGAGGATGGCTGCTGTATCATCAAGGATTTCACCGATGTAGCGACTGTA
AAGCAGGTTAATGAGGAGGTACAGTCCTACCTTGATGCCGACAAGCCATG
GAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001752-T1.utr3p1 | KJC3_001752-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:584836..586949 - |
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