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KJC3_001754-T1, KJC3_001754-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001754-T1
Unique NameKJC3_001754-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:590472..592324-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001754-T1 ID=KJC3_001754-T1|Name=KJC3_001754-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1853bp|location=Sequence derived from alignment at ch2:590472..592324- (Aspergillus niger KJC3)
CTTGTCTCCGACCTGAAGACTTGGTCCTACCAGCGGCCACATGCAATTCT
ATTGGACACAGTCAAGGTACGATGATCATGCGTATGGTTACATTCACTAT
CGATTGAGCAAAAGCTAACTTGCCTCGGGGTTGGCCGTAACAGTGACTTA
GCATTCCTCTGATTCGCACTCCCCTCCTATCGATGACGCTGATCTTGGCC
ACCTACGGACAGCTTCTCCGCACTGGCTCTCCACTGCCCCAGCACCACCC
CGGATTTCCACTGGCGCATCCATCCATTGCATCTAAGTAATGATATCAAA
CTCGTCCCAATTTTGGGATCCCACACCTCCAGCGAGCATCATCACTCAAT
TAGATCGAAGATCAAGCTCAATTCACCATGCCGCCATGTGCGTTCCAGAT
ACTGTTCGTCGATCCCCCGCTTGGAGAAGACGATCGAGTAGGCCCCTGGC
TTGGAGATATATTCATCTCCTATTTAGCTGAATCGATGATTCCCCAGTAA
TTTGAATCTCTGTCCTCCAATGCTTCACAATTACCATAGAGAAAATGCCT
TCAGAACAACTCTCCATTTTCCCTTCCACATCAATGTCTTCCACCCCCAG
CTCCCAGGAGAAACCCCCAACCGCTGAACCAACCCTCGTGAGAACAAACA
CTTCCACAGCAACTCCCAATGACTCCTACCACTTCGACTTCGGGCCCCTC
GCCCACGTCAACACAGCAGGAACCATCTATCCCGCCTTCGCCGGCGAACT
CCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCGCAAGATCGCCAATCCCG
CACCGTTAGGACTATGCGGGTTCGCGCTCACTACATTCCTCCTGGGCTGC
ATCAACATGCAAACTCTGGGAATCGCCACACCGAACATGATCGTCGGCCC
TGCTCTCGCATACGGGGGTCTTGTCCAGCTTCTCGCGGGCATGTGGTACG
TACATACCTCCCCCCCAACGGCAATCCAACCTAGCAACTCAAGTCCCCCA
TCGATGTCCATGTCCACTAACCAATCAAACCAGGGAAATGGCCGCCGGGA
ACACCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTCTGGATCTCC
CTATCCATAGTCTTCACTCCAGGCGGATTCGACATCCAGGGCGCCTACAA
AGCAGCCGATAATGGCAGCATGGGGATGTTCTACGACGCATTCGGATTAT
ACCTAATGGTATTTCACTCTCCACCCAATCATTACCACGAAGTACTAATA
ATAATCCAGGGCTGGTTCATCTTCACCTTCCTCCTCTGGCTCTGCACGCT
CAAATCGACCTACGTCTTCTGCGCCCTCTTCGCGGCCGTCGATATCGCCC
TCCTCCTTCTAGCAGTCGGGTATATCCACCGCACTGCGCCAGAGGTTCCC
AACGCAAAGATCATTAAAGCCGGTGGGTTGTTTGCGCTGCTGGGCGCCTT
CATGGCTTGGTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATAGTT
TCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGGGAG
TCGAGACGGAAGGACGGGGAGAGTGGGGAGACTGTTTGAAATGATTTTTG
ATACCATGTTGGTTTTCATGGGTTATGGGTTACTGTATGTTATGTTTGTA
ATGAGTGATGAGTACGGGTGTTTTGGGGACTGGTTCCGTTTTTTGCCTTT
ACTTGGGATGGGTATTTCAGGATGGACGTATGGGTATGGATATTATGGAA
TTTAGGGCGCTTTAGATTAGCACTTGACTTCTTACTTTCTTTTAGCTGTC
GCTGGGTATGGTATTTAGACTCGCGCGTGGCTAGACATGAATATGTACGG
CAC
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Coding sequence (CDS) from alignment at ch2:590472..592324-

>KJC3_001754-T1 ID=KJC3_001754-T1|Name=KJC3_001754-T1|organism=Aspergillus niger KJC3|type=CDS|length=2718bp|location=Sequence derived from alignment at ch2:590472..592324- (Aspergillus niger KJC3)
GGCTGGTTCATCTTCACCTTCCTCCTCTGGCTCTGCACGCTCAAATCGAC
CTACGTCTTCTGCGCCCTCTTCGCGGCCGTCGATATCGCCCTCCTCCTTC
TAGCAGTCGGGTATATCCACCGCACTGCGCCAGAGGTTCCCAACGCAAAG
ATCATTAAAGCCGGTGGGTTGTTTGCGCTGCTGGGCGCCTTCATGGCTTG
GTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATAGTTTCTTTCTTG
TTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGGGAGTCGAGACGG
AAGGACGGGGAGAGTGGGGAGACTGTTTGAGGAAATGGCCGCCGGGAACA
CCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTCTGGATCTCCCTA
TCCATAGTCTTCACTCCAGGCGGATTCGACATCCAGGGCGCCTACAAAGC
AGCCGATAATGGCAGCATGGGGATGTTCTACGACGCATTCGGATTATACC
TAATGATGCCTTCAGAACAACTCTCCATTTTCCCTTCCACATCAATGTCT
TCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAACCCTCGT
GAGAACAAACACTTCCACAGCAACTCCCAATGACTCCTACCACTTCGACT
TCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCCGCCTTC
GCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCGCAAGAT
CGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTACATTCC
TCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCGAACATG
ATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCTCGCGGG
CATGTGGGCTGGTTCATCTTCACCTTCCTCCTCTGGCTCTGCACGCTCAA
ATCGACCTACGTCTTCTGCGCCCTCTTCGCGGCCGTCGATATCGCCCTCC
TCCTTCTAGCAGTCGGGTATATCCACCGCACTGCGCCAGAGGTTCCCAAC
GCAAAGATCATTAAAGCCGGTGGGTTGTTTGCGCTGCTGGGCGCCTTCAT
GGCTTGGTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATAGTTTCT
TTCTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGGGAGTCG
AGACGGAAGGACGGGGAGAGTGGGGAGACTGTTTGAGGAAATGGCCGCCG
GGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTCTGGATC
TCCCTATCCATAGTCTTCACTCCAGGCGGATTCGACATCCAGGGCGCCTA
CAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTACGACGCATTCGGAT
TATACCTAATGATGCCTTCAGAACAACTCTCCATTTTCCCTTCCACATCA
ATGTCTTCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAAC
CCTCGTGAGAACAAACACTTCCACAGCAACTCCCAATGACTCCTACCACT
TCGACTTCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCC
GCCTTCGCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCG
CAAGATCGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTA
CATTCCTCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCG
AACATGATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCT
CGCGGGCATGTGGGCTGGTTCATCTTCACCTTCCTCCTCTGGCTCTGCAC
GCTCAAATCGACCTACGTCTTCTGCGCCCTCTTCGCGGCCGTCGATATCG
CCCTCCTCCTTCTAGCAGTCGGGTATATCCACCGCACTGCGCCAGAGGTT
CCCAACGCAAAGATCATTAAAGCCGGTGGGTTGTTTGCGCTGCTGGGCGC
CTTCATGGCTTGGTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATA
GTTTCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGG
GAGTCGAGACGGAAGGACGGGGAGAGTGGGGAGACTGTTTGAGGAAATGG
CCGCCGGGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTC
TGGATCTCCCTATCCATAGTCTTCACTCCAGGCGGATTCGACATCCAGGG
CGCCTACAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTACGACGCAT
TCGGATTATACCTAATGATGCCTTCAGAACAACTCTCCATTTTCCCTTCC
ACATCAATGTCTTCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGA
ACCAACCCTCGTGAGAACAAACACTTCCACAGCAACTCCCAATGACTCCT
ACCACTTCGACTTCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATC
TATCCCGCCTTCGCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAA
GCGTCGCAAGATCGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGC
TCACTACATTCCTCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCC
ACACCGAACATGATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCA
GCTTCTCGCGGGCATGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001754KJC3_001754Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001754-T1KJC3_001754-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001754-T1.cdsKJC3_001754-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001754-T1.utr3p1KJC3_001754-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001754-T1.exon4KJC3_001754-T1.exon4Aspergillus niger KJC3exon
KJC3_001754-T1.exon3KJC3_001754-T1.exon3Aspergillus niger KJC3exon
KJC3_001754-T1.exon2KJC3_001754-T1.exon2Aspergillus niger KJC3exon
KJC3_001754-T1.exon1KJC3_001754-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001754-T1.utr5p2KJC3_001754-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001754-T1.utr5p1KJC3_001754-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000791
DBxrefPFAM:PF01184
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:590472..592324 -
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