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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:605528..607923+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001759-T1 ID=KJC3_001759-T1|Name=KJC3_001759-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2396bp|location=Sequence derived from alignment at ch2:605528..607923+ (Aspergillus niger KJC3)
CAATATATATATTTCCAGTCCAAGGGTATTCCTGCTCATTCTAACAAATG
ACTTAGTTGCTACGCTTGCAGCTCCATTTTCCTACCTCGTCCAATCCTTT
ACTAAGTCTGCGCACAGTACAAAATGGCCGCTGTATATGACTTTGTCATC
ATTGGTGGCGGTACGGCTGGCCTGGTTGTTGCTTCTCGACTCAGCGAGGA
CCCCAACACTTCTGTCCTGGTTCTCGAAGCAGGCGCCGACTTGACAGCAG
ATCCCCGCGTTAACATTCCCATCTTCTATGCCGCACTGCTTGGATCCGAC
GCCGATTGGAAGTTCAAATCTTCCCCTCAGGTAATGACCGTCTATCTTAA
TAAAGGGTGTGGGCTTACCCATTGCTTTTGCAGCCAGGCCTCAACGGCAG
AGTGCTTGGTCTTAACCAGGGCAAGACACTCGGAGGATCCAGTTCATTGA
ATGCACACGTTTTTGTTCCTCCTTTCAAGGGAGTCATTGACTCATGGGAG
GCACTCGGTAACCTCGGATGGAATTGGACCATGCTAAGGGATTCTTTCTC
CAAGGCCTATAGCAGTCCGACTGTGACACAGGATGCCAAAGAAGGTCTAG
CAATTGAGGGCTGGCCTGAATTGAACGAAGCGAAAGGCCCGATCCAAACA
TCTTTTGGCAATGAGGCACATCCTATTCGCAAGGCATGGGCCGAACTGTT
TCGTAACAATGGGCAATACAACGCCGGGGATCCGTTCATCCACAGCTCTG
TAGGATCATTCAGTTGCCTTGCTAGTATCGACTCGGAGGGCAAGAGAAGC
AACTCCACCTCGGCCTACTATAAGCCTGTTGAGCTTCGACATAATCTTCA
CGTTCTTACGAACTCATTGGTTGAGAAAATTCTGTTTGACGAAAGCAAGC
CTCCCAGAGCTATTGGAGTCCAATACAGTCACGATGGTGTTTCAAAGACT
TTTCAGGCAAGGAATGAAGTTATACTTGCTGCTGGCGCTTTTCAATCTCC
CAAAATTCTCCAACTTTCAGGAGTCGGTGGAGCAGAACTTCTTGAGAAGC
ATGGCATCGATATTGTCATGGACCTTCCTGGAGTTGGGCAGAATCTTCAG
GGTATGTGAACAGCTTCTAATCTAGTATCGGTCACAAATAACGTGAAACC
ATCTTCCTTATTGACGCATACTCGCTTTGGAGTGAAAACTAACCTCGACT
ACTTCTAGATCATATGATCTCGTACACCGCATTCCAAGCAAAGCCTGAGA
TCGAGACTAAGGACTCTCTGGTCAGACAAGAGCCTGAAGCCATCGGTCAG
GCAATGCAGGAATACGCTGCCACGGGATCTGGGCCCCTAGCTTCCCTCGG
GGTTTACACCTACGCCTATTTGTCTCTTCCTGACCCTGACAGAAGTGCTC
TTCAGGCACTACTTTCAGATGACACTCCCGATAACTCACAACAACACAAG
GCAACACAGGCTTATTATGACATTGCAAAGACCACCATTCTTGACTCTAA
GCAACCATCAGCTGCGTACCTGGCCGCGTTAGGGCAGACGAATTATTCCA
AAGACCTGAATGATGGGACTATTCCAGCTGCTTCGCCTGGAAAGTTCATT
ACGCTTGGAGTTATGCTCTCTCAACCCCTTTCCCGCGGAAGCGTTTATAT
GTGAGTAACTTTAGCATTTTCTTCTTCACAAGCTTCCAACCCCCTACCAA
CTCTATATTCATCAAATCTGACAAAACGAACCCAAGTACTTCCAACAACC
CCGAAACCCCTCCAATGATTGATCCTGGTTACCTGTCAAACCCTCTCGAT
CTGGAAGTCATAGCACGGCACTTGCTCGGTGTCAAGAACTTAGCAGAGTC
ACCTCAGCTTGGCGAGCTTCTCGAACAGCCACTGAAGTTCCGTGACCCGG
CTGCAGACTTCCAGGGAGACTTAGATGCCGCAAAGAAGTATGCTCGGGAT
AATTTGGTCTCTATGTGGCACTTTGTGGGGACCTGTTCCATGCTGCCTCG
TGAAAAGGACGGAGTAGTGGATTCCAGTTTAAAGGTCTATGGTATCGAAG
GACTGAGGGTCGTGGATGCGAGTGCCATCCCGCTTGTAAGCACGGCGAAT
CTGCAAGCCACTGTGTACGCATTCGCGGAAAGAGCAGCGGACCTCATCAA
GCAGGACTGGAAGAGTGAGTGAACAAGGCGTTAGAGAATGTCTGCCGACA
CACTCTAGGTTACTTGCAAAAGAGATGTGAATGGAAAATCCGCCTAATCA
CCCAGCATTCTCGTATCGTCGCGCAAACTCGCGGGTAATCAGTCGCTCCA
AACGTTTCTTCTCCTTCGTAGAATCTTTTTACAGTGCGATTTCCCCCTTC
TATGGGCCAACATGAAAATCGGTAATGCCAGGCGAGAAGTAATCTG back to topCoding sequence (CDS) from alignment at ch2:605528..607923+ >KJC3_001759-T1 ID=KJC3_001759-T1|Name=KJC3_001759-T1|organism=Aspergillus niger KJC3|type=CDS|length=7212bp|location=Sequence derived from alignment at ch2:605528..607923+ (Aspergillus niger KJC3)
ATGGCCGCTGTATATGACTTTGTCATCATTGGTGGCGGTACGGCTGGCCT
GGTTGTTGCTTCTCGACTCAGCGAGGACCCCAACACTTCTGTCCTGGTTC
TCGAAGCAGGCGCCGACTTGACAGCAGATCCCCGCGTTAACATTCCCATC
TTCTATGCCGCACTGCTTGGATCCGACGCCGATTGGAAGTTCAAATCTTC
CCCTCAGCCAGGCCTCAACGGCAGAGTGCTTGGTCTTAACCAGGGCAAGA
CACTCGGAGGATCCAGTTCATTGAATGCACACGTTTTTGTTCCTCCTTTC
AAGGGAGTCATTGACTCATGGGAGGCACTCGGTAACCTCGGATGGAATTG
GACCATGCTAAGGGATTCTTTCTCCAAGGCCTATAGCAGTCCGACTGTGA
CACAGGATGCCAAAGAAGGTCTAGCAATTGAGGGCTGGCCTGAATTGAAC
GAAGCGAAAGGCCCGATCCAAACATCTTTTGGCAATGAGGCACATCCTAT
TCGCAAGGCATGGGCCGAACTGTTTCGTAACAATGGGCAATACAACGCCG
GGGATCCGTTCATCCACAGCTCTGTAGGATCATTCAGTTGCCTTGCTAGT
ATCGACTCGGAGGGCAAGAGAAGCAACTCCACCTCGGCCTACTATAAGCC
TGTTGAGCTTCGACATAATCTTCACGTTCTTACGAACTCATTGGTTGAGA
AAATTCTGTTTGACGAAAGCAAGCCTCCCAGAGCTATTGGAGTCCAATAC
AGTCACGATGGTGTTTCAAAGACTTTTCAGGCAAGGAATGAAGTTATACT
TGCTGCTGGCGCTTTTCAATCTCCCAAAATTCTCCAACTTTCAGGAGTCG
GTGGAGCAGAACTTCTTGAGAAGCATGGCATCGATATTGTCATGGACCTT
CCTGGAGTTGGGCAGAATCTTCAGGATCATATGATCTCGTACACCGCATT
CCAAGCAAAGCCTGAGATCGAGACTAAGGACTCTCTGGTCAGACAAGAGC
CTGAAGCCATCGGTCAGGCAATGCAGGAATACGCTGCCACGGGATCTGGG
CCCCTAGCTTCCCTCGGGGTTTACACCTACGCCTATTTGTCTCTTCCTGA
CCCTGACAGAAGTGCTCTTCAGGCACTACTTTCAGATGACACTCCCGATA
ACTCACAACAACACAAGGCAACACAGGCTTATTATGACATTGCAAAGACC
ACCATTCTTGACTCTAAGCAACCATCAGCTGCGTACCTGGCCGCGTTAGG
GCAGACGAATTATTCCAAAGACCTGAATGATGGGACTATTCCAGCTGCTT
CGCCTGGAAAGTTCATTACGCTTGGAGTTATGCTCTCTCAACCCCTTTCC
CGCGGAAGCGTTTATATTACTTCCAACAACCCCGAAACCCCTCCAATGAT
TGATCCTGGTTACCTGTCAAACCCTCTCGATCTGGAAGTCATAGCACGGC
ACTTGCTCGGTGTCAAGAACTTAGCAGAGTCACCTCAGCTTGGCGAGCTT
CTCGAACAGCCACTGAAGTTCCGTGACCCGGCTGCAGACTTCCAGGGAGA
CTTAGATGCCGCAAAGAAGTATGCTCGGGATAATTTGGTCTCTATGTGGC
ACTTTGTGGGGACCTGTTCCATGCTGCCTCGTGAAAAGGACGGAGTAGTG
GATTCCAGTTTAAAGGTCTATGGTATCGAAGGACTGAGGGTCGTGGATGC
GAGTGCCATCCCGCTTGTAAGCACGGCGAATCTGCAAGCCACTGTGTACG
CATTCGCGGAAAGAGCAGCGGACCTCATCAAGCAGGACTGGAAGAGTGAG
TGAATGGCCGCTGTATATGACTTTGTCATCATTGGTGGCGGTACGGCTGG
CCTGGTTGTTGCTTCTCGACTCAGCGAGGACCCCAACACTTCTGTCCTGG
TTCTCGAAGCAGGCGCCGACTTGACAGCAGATCCCCGCGTTAACATTCCC
ATCTTCTATGCCGCACTGCTTGGATCCGACGCCGATTGGAAGTTCAAATC
TTCCCCTCAGCCAGGCCTCAACGGCAGAGTGCTTGGTCTTAACCAGGGCA
AGACACTCGGAGGATCCAGTTCATTGAATGCACACGTTTTTGTTCCTCCT
TTCAAGGGAGTCATTGACTCATGGGAGGCACTCGGTAACCTCGGATGGAA
TTGGACCATGCTAAGGGATTCTTTCTCCAAGGCCTATAGCAGTCCGACTG
TGACACAGGATGCCAAAGAAGGTCTAGCAATTGAGGGCTGGCCTGAATTG
AACGAAGCGAAAGGCCCGATCCAAACATCTTTTGGCAATGAGGCACATCC
TATTCGCAAGGCATGGGCCGAACTGTTTCGTAACAATGGGCAATACAACG
CCGGGGATCCGTTCATCCACAGCTCTGTAGGATCATTCAGTTGCCTTGCT
AGTATCGACTCGGAGGGCAAGAGAAGCAACTCCACCTCGGCCTACTATAA
GCCTGTTGAGCTTCGACATAATCTTCACGTTCTTACGAACTCATTGGTTG
AGAAAATTCTGTTTGACGAAAGCAAGCCTCCCAGAGCTATTGGAGTCCAA
TACAGTCACGATGGTGTTTCAAAGACTTTTCAGGCAAGGAATGAAGTTAT
ACTTGCTGCTGGCGCTTTTCAATCTCCCAAAATTCTCCAACTTTCAGGAG
TCGGTGGAGCAGAACTTCTTGAGAAGCATGGCATCGATATTGTCATGGAC
CTTCCTGGAGTTGGGCAGAATCTTCAGGATCATATGATCTCGTACACCGC
ATTCCAAGCAAAGCCTGAGATCGAGACTAAGGACTCTCTGGTCAGACAAG
AGCCTGAAGCCATCGGTCAGGCAATGCAGGAATACGCTGCCACGGGATCT
GGGCCCCTAGCTTCCCTCGGGGTTTACACCTACGCCTATTTGTCTCTTCC
TGACCCTGACAGAAGTGCTCTTCAGGCACTACTTTCAGATGACACTCCCG
ATAACTCACAACAACACAAGGCAACACAGGCTTATTATGACATTGCAAAG
ACCACCATTCTTGACTCTAAGCAACCATCAGCTGCGTACCTGGCCGCGTT
AGGGCAGACGAATTATTCCAAAGACCTGAATGATGGGACTATTCCAGCTG
CTTCGCCTGGAAAGTTCATTACGCTTGGAGTTATGCTCTCTCAACCCCTT
TCCCGCGGAAGCGTTTATATTACTTCCAACAACCCCGAAACCCCTCCAAT
GATTGATCCTGGTTACCTGTCAAACCCTCTCGATCTGGAAGTCATAGCAC
GGCACTTGCTCGGTGTCAAGAACTTAGCAGAGTCACCTCAGCTTGGCGAG
CTTCTCGAACAGCCACTGAAGTTCCGTGACCCGGCTGCAGACTTCCAGGG
AGACTTAGATGCCGCAAAGAAGTATGCTCGGGATAATTTGGTCTCTATGT
GGCACTTTGTGGGGACCTGTTCCATGCTGCCTCGTGAAAAGGACGGAGTA
GTGGATTCCAGTTTAAAGGTCTATGGTATCGAAGGACTGAGGGTCGTGGA
TGCGAGTGCCATCCCGCTTGTAAGCACGGCGAATCTGCAAGCCACTGTGT
ACGCATTCGCGGAAAGAGCAGCGGACCTCATCAAGCAGGACTGGAAGAGT
GAGTGAATGGCCGCTGTATATGACTTTGTCATCATTGGTGGCGGTACGGC
TGGCCTGGTTGTTGCTTCTCGACTCAGCGAGGACCCCAACACTTCTGTCC
TGGTTCTCGAAGCAGGCGCCGACTTGACAGCAGATCCCCGCGTTAACATT
CCCATCTTCTATGCCGCACTGCTTGGATCCGACGCCGATTGGAAGTTCAA
ATCTTCCCCTCAGCCAGGCCTCAACGGCAGAGTGCTTGGTCTTAACCAGG
GCAAGACACTCGGAGGATCCAGTTCATTGAATGCACACGTTTTTGTTCCT
CCTTTCAAGGGAGTCATTGACTCATGGGAGGCACTCGGTAACCTCGGATG
GAATTGGACCATGCTAAGGGATTCTTTCTCCAAGGCCTATAGCAGTCCGA
CTGTGACACAGGATGCCAAAGAAGGTCTAGCAATTGAGGGCTGGCCTGAA
TTGAACGAAGCGAAAGGCCCGATCCAAACATCTTTTGGCAATGAGGCACA
TCCTATTCGCAAGGCATGGGCCGAACTGTTTCGTAACAATGGGCAATACA
ACGCCGGGGATCCGTTCATCCACAGCTCTGTAGGATCATTCAGTTGCCTT
GCTAGTATCGACTCGGAGGGCAAGAGAAGCAACTCCACCTCGGCCTACTA
TAAGCCTGTTGAGCTTCGACATAATCTTCACGTTCTTACGAACTCATTGG
TTGAGAAAATTCTGTTTGACGAAAGCAAGCCTCCCAGAGCTATTGGAGTC
CAATACAGTCACGATGGTGTTTCAAAGACTTTTCAGGCAAGGAATGAAGT
TATACTTGCTGCTGGCGCTTTTCAATCTCCCAAAATTCTCCAACTTTCAG
GAGTCGGTGGAGCAGAACTTCTTGAGAAGCATGGCATCGATATTGTCATG
GACCTTCCTGGAGTTGGGCAGAATCTTCAGGATCATATGATCTCGTACAC
CGCATTCCAAGCAAAGCCTGAGATCGAGACTAAGGACTCTCTGGTCAGAC
AAGAGCCTGAAGCCATCGGTCAGGCAATGCAGGAATACGCTGCCACGGGA
TCTGGGCCCCTAGCTTCCCTCGGGGTTTACACCTACGCCTATTTGTCTCT
TCCTGACCCTGACAGAAGTGCTCTTCAGGCACTACTTTCAGATGACACTC
CCGATAACTCACAACAACACAAGGCAACACAGGCTTATTATGACATTGCA
AAGACCACCATTCTTGACTCTAAGCAACCATCAGCTGCGTACCTGGCCGC
GTTAGGGCAGACGAATTATTCCAAAGACCTGAATGATGGGACTATTCCAG
CTGCTTCGCCTGGAAAGTTCATTACGCTTGGAGTTATGCTCTCTCAACCC
CTTTCCCGCGGAAGCGTTTATATTACTTCCAACAACCCCGAAACCCCTCC
AATGATTGATCCTGGTTACCTGTCAAACCCTCTCGATCTGGAAGTCATAG
CACGGCACTTGCTCGGTGTCAAGAACTTAGCAGAGTCACCTCAGCTTGGC
GAGCTTCTCGAACAGCCACTGAAGTTCCGTGACCCGGCTGCAGACTTCCA
GGGAGACTTAGATGCCGCAAAGAAGTATGCTCGGGATAATTTGGTCTCTA
TGTGGCACTTTGTGGGGACCTGTTCCATGCTGCCTCGTGAAAAGGACGGA
GTAGTGGATTCCAGTTTAAAGGTCTATGGTATCGAAGGACTGAGGGTCGT
GGATGCGAGTGCCATCCCGCTTGTAAGCACGGCGAATCTGCAAGCCACTG
TGTACGCATTCGCGGAAAGAGCAGCGGACCTCATCAAGCAGGACTGGAAG
AGTGAGTGAATGGCCGCTGTATATGACTTTGTCATCATTGGTGGCGGTAC
GGCTGGCCTGGTTGTTGCTTCTCGACTCAGCGAGGACCCCAACACTTCTG
TCCTGGTTCTCGAAGCAGGCGCCGACTTGACAGCAGATCCCCGCGTTAAC
ATTCCCATCTTCTATGCCGCACTGCTTGGATCCGACGCCGATTGGAAGTT
CAAATCTTCCCCTCAGCCAGGCCTCAACGGCAGAGTGCTTGGTCTTAACC
AGGGCAAGACACTCGGAGGATCCAGTTCATTGAATGCACACGTTTTTGTT
CCTCCTTTCAAGGGAGTCATTGACTCATGGGAGGCACTCGGTAACCTCGG
ATGGAATTGGACCATGCTAAGGGATTCTTTCTCCAAGGCCTATAGCAGTC
CGACTGTGACACAGGATGCCAAAGAAGGTCTAGCAATTGAGGGCTGGCCT
GAATTGAACGAAGCGAAAGGCCCGATCCAAACATCTTTTGGCAATGAGGC
ACATCCTATTCGCAAGGCATGGGCCGAACTGTTTCGTAACAATGGGCAAT
ACAACGCCGGGGATCCGTTCATCCACAGCTCTGTAGGATCATTCAGTTGC
CTTGCTAGTATCGACTCGGAGGGCAAGAGAAGCAACTCCACCTCGGCCTA
CTATAAGCCTGTTGAGCTTCGACATAATCTTCACGTTCTTACGAACTCAT
TGGTTGAGAAAATTCTGTTTGACGAAAGCAAGCCTCCCAGAGCTATTGGA
GTCCAATACAGTCACGATGGTGTTTCAAAGACTTTTCAGGCAAGGAATGA
AGTTATACTTGCTGCTGGCGCTTTTCAATCTCCCAAAATTCTCCAACTTT
CAGGAGTCGGTGGAGCAGAACTTCTTGAGAAGCATGGCATCGATATTGTC
ATGGACCTTCCTGGAGTTGGGCAGAATCTTCAGGATCATATGATCTCGTA
CACCGCATTCCAAGCAAAGCCTGAGATCGAGACTAAGGACTCTCTGGTCA
GACAAGAGCCTGAAGCCATCGGTCAGGCAATGCAGGAATACGCTGCCACG
GGATCTGGGCCCCTAGCTTCCCTCGGGGTTTACACCTACGCCTATTTGTC
TCTTCCTGACCCTGACAGAAGTGCTCTTCAGGCACTACTTTCAGATGACA
CTCCCGATAACTCACAACAACACAAGGCAACACAGGCTTATTATGACATT
GCAAAGACCACCATTCTTGACTCTAAGCAACCATCAGCTGCGTACCTGGC
CGCGTTAGGGCAGACGAATTATTCCAAAGACCTGAATGATGGGACTATTC
CAGCTGCTTCGCCTGGAAAGTTCATTACGCTTGGAGTTATGCTCTCTCAA
CCCCTTTCCCGCGGAAGCGTTTATATTACTTCCAACAACCCCGAAACCCC
TCCAATGATTGATCCTGGTTACCTGTCAAACCCTCTCGATCTGGAAGTCA
TAGCACGGCACTTGCTCGGTGTCAAGAACTTAGCAGAGTCACCTCAGCTT
GGCGAGCTTCTCGAACAGCCACTGAAGTTCCGTGACCCGGCTGCAGACTT
CCAGGGAGACTTAGATGCCGCAAAGAAGTATGCTCGGGATAATTTGGTCT
CTATGTGGCACTTTGTGGGGACCTGTTCCATGCTGCCTCGTGAAAAGGAC
GGAGTAGTGGATTCCAGTTTAAAGGTCTATGGTATCGAAGGACTGAGGGT
CGTGGATGCGAGTGCCATCCCGCTTGTAAGCACGGCGAATCTGCAAGCCA
CTGTGTACGCATTCGCGGAAAGAGCAGCGGACCTCATCAAGCAGGACTGG
AAGAGTGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001759-T1.utr5p1 | KJC3_001759-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001759-T1.utr3p1 | KJC3_001759-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_2 |
| DBxref | InterPro:IPR007867 |
| DBxref | InterPro:IPR000172 |
| DBxref | InterPro:IPR012132 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:605528..607923 + |
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