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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:608620..610732+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001760-T1 ID=KJC3_001760-T1|Name=KJC3_001760-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2113bp|location=Sequence derived from alignment at ch2:608620..610732+ (Aspergillus niger KJC3)
GTCTGGAGAACATCCCCTCTGCATACCATGACATGATGGAGTATGAACTA
CCCCCAACCCCAGTGGCTACCAGTGGCTCCCCGCCAACTGTGTCTGGGGA
ATGAAGACCCGAACTTAAAGATATACCCGATGACTTCACCCGGCGGCCAT
CGGCTGTGTGGTCGGCAGTCAGTCGGAACGCCCTCGTTATAATAATTATT
ATCGCGGGTCACCCCGCCATCTGCCCCTCATTGTTGATCCGGTCTCTCAT
ATTCCTTTCCTATTGCTTCATTTCTCTCGATTTCGGCGGTATCTTCAGTC
AACATCAAAATGGCGACCCCCGGCCTTCTCTGGGTGACGATGAACCCTCG
TCCCTCCCTCCCCGCCGCTCAATTCCACGACTGGTACAACACCGAACACG
GCCCTCTGCGCCTGCGTCTGCCCTTCTGCACCAATGGCTTCCGCTATCGC
GCGACCGACGGCGAGGAGCCCGAGTGGGTGGCCCTCTACGATATCACCGA
CATGGTGGAGTTGACGCGCGAGACCTACCTTGCCCTGCGCGGCGACACTA
TCAAGACCCCCCGGGAAAAGGCTACCATGGCCCAGATTGACGTCGATCGC
CGGCTCTACGATACCGTTCTCGAGCAAAAGGCGGCTGATTACAAACCCCT
CGAGCTTACCCCCGATACCGAGGCTGCCGGCTCCGTCCTCATCGCCGTCT
CCCTCTCCCTCTCCTCCGCCGACGCCGCTAAAGAGGACGAATTCACCCGC
TGGTACCGCGAAGAGCACATCCCCATGCTGTCCCGCGTGCCCGGTTGGCG
CTCCTCCCGCCTCTTCGTCACCTCCACCATCGACCCCAAGGCCCCTCGCG
AATACTTGGCCGTGCATGAGTACGCTGCTCAGAATGGTCTGGGCGGTCCC
GAATACAAGGCTGCGACAGACACCCCCTGGCGCACCCGCATTATGACCGA
CGTCGTGGCTAAGGCCCGCCGTCGCACTTATCAGTGGGCCTACACCTTCG
GACCCGCTCCCCGCGAGCTGTCATCCCTGACCTCTGCGGATTGCATCGGT
CCCTGGTCGTCTATCGACGGCAAAACCCGCACCCTGCCTTCTCCCACCCG
CCCGGCCGTCGAGTCCTTCGTCACCACCCCTGACGGCGTCGAGCTCCCCT
ACCGTTTGGAGGGCAGCACCGACCCCCACAGTCCGGTCATCGTGCTCAGC
AACTCCATCCTGGTGGACTACACTATCTGGGATGACTTCGTCGACCAGTT
CCTCTCTGACCCTCGCAACCAGAACTTCCGCATTGTCCGCTACTGCACCC
GTGGCCGCCAGCAAGAATGCGGCGATAAGCCCGTCAACATTGATCTCCTG
GCCTCGGACATCATCGCACTGCTGGACGCTCTGCGCGTTCCCAAGGCCAC
CCTTATCGGCGTCAGTCTGGGTGGTGTAACGGTGCTGAACACCTCCCTGC
TGTACCCGGAGCGCGTGGAGCGCTTCATCTCCTGCGACACCAACAGCTCC
AGCCCCGAGACGAACCGGAAGGCGTGGAACGAGCGTGTCGAGCTGGCAGC
CAGCGAGGGTGCTGTGTCAGCTACCACGCAGCAGGCGATTGTCGGCGAGC
AACTGGCCGAGATTACCGTGCGGCGGTGGTTCACGGCCGAGTCGTATGAG
ACTCAGCCCCACCTGCCCGCCAAGGCGAAGGAGCTGGTGCGGACGAACAG
TCTGCCCGGGTTCAGGCAGAGCGTGCAGGCACTGTGTGCGTATGATGTGC
GGGACCGGATGGCGCAGGCGCAGGTGCCGGGCCTGTTTGTGGCGGGCGAG
AGTGACGGTGTGCTGCCGAAGACAATGCAGCAGATGGTGGCGGATCTGAA
GAGCGATTCCGAGTTGAAGTTGGTGCCGAAGGCGGGTCATTTACCGATGC
TGGAGAATGCGGCGGCGTTCACGGCGGTGGTGAATGAGTACCTGCACTAG
GTGGATACCAGCTGTTATGTAGACGAGCTGTTGTTGTTATGTATATAGTA
GAATATGATCAGCGTGACGATAACGAGTGATCCAATAGCAGTCTGTGGTA
GTAATAAACTTGCCGACATCCGAGGTGCGGGGTTGCTTATCTTCCCCTCT
TCTTCATACATCC back to topCoding sequence (CDS) from alignment at ch2:608620..610732+ >KJC3_001760-T1 ID=KJC3_001760-T1|Name=KJC3_001760-T1|organism=Aspergillus niger KJC3|type=CDS|length=1641bp|location=Sequence derived from alignment at ch2:608620..610732+ (Aspergillus niger KJC3)
ATGGCGACCCCCGGCCTTCTCTGGGTGACGATGAACCCTCGTCCCTCCCT
CCCCGCCGCTCAATTCCACGACTGGTACAACACCGAACACGGCCCTCTGC
GCCTGCGTCTGCCCTTCTGCACCAATGGCTTCCGCTATCGCGCGACCGAC
GGCGAGGAGCCCGAGTGGGTGGCCCTCTACGATATCACCGACATGGTGGA
GTTGACGCGCGAGACCTACCTTGCCCTGCGCGGCGACACTATCAAGACCC
CCCGGGAAAAGGCTACCATGGCCCAGATTGACGTCGATCGCCGGCTCTAC
GATACCGTTCTCGAGCAAAAGGCGGCTGATTACAAACCCCTCGAGCTTAC
CCCCGATACCGAGGCTGCCGGCTCCGTCCTCATCGCCGTCTCCCTCTCCC
TCTCCTCCGCCGACGCCGCTAAAGAGGACGAATTCACCCGCTGGTACCGC
GAAGAGCACATCCCCATGCTGTCCCGCGTGCCCGGTTGGCGCTCCTCCCG
CCTCTTCGTCACCTCCACCATCGACCCCAAGGCCCCTCGCGAATACTTGG
CCGTGCATGAGTACGCTGCTCAGAATGGTCTGGGCGGTCCCGAATACAAG
GCTGCGACAGACACCCCCTGGCGCACCCGCATTATGACCGACGTCGTGGC
TAAGGCCCGCCGTCGCACTTATCAGTGGGCCTACACCTTCGGACCCGCTC
CCCGCGAGCTGTCATCCCTGACCTCTGCGGATTGCATCGGTCCCTGGTCG
TCTATCGACGGCAAAACCCGCACCCTGCCTTCTCCCACCCGCCCGGCCGT
CGAGTCCTTCGTCACCACCCCTGACGGCGTCGAGCTCCCCTACCGTTTGG
AGGGCAGCACCGACCCCCACAGTCCGGTCATCGTGCTCAGCAACTCCATC
CTGGTGGACTACACTATCTGGGATGACTTCGTCGACCAGTTCCTCTCTGA
CCCTCGCAACCAGAACTTCCGCATTGTCCGCTACTGCACCCGTGGCCGCC
AGCAAGAATGCGGCGATAAGCCCGTCAACATTGATCTCCTGGCCTCGGAC
ATCATCGCACTGCTGGACGCTCTGCGCGTTCCCAAGGCCACCCTTATCGG
CGTCAGTCTGGGTGGTGTAACGGTGCTGAACACCTCCCTGCTGTACCCGG
AGCGCGTGGAGCGCTTCATCTCCTGCGACACCAACAGCTCCAGCCCCGAG
ACGAACCGGAAGGCGTGGAACGAGCGTGTCGAGCTGGCAGCCAGCGAGGG
TGCTGTGTCAGCTACCACGCAGCAGGCGATTGTCGGCGAGCAACTGGCCG
AGATTACCGTGCGGCGGTGGTTCACGGCCGAGTCGTATGAGACTCAGCCC
CACCTGCCCGCCAAGGCGAAGGAGCTGGTGCGGACGAACAGTCTGCCCGG
GTTCAGGCAGAGCGTGCAGGCACTGTGTGCGTATGATGTGCGGGACCGGA
TGGCGCAGGCGCAGGTGCCGGGCCTGTTTGTGGCGGGCGAGAGTGACGGT
GTGCTGCCGAAGACAATGCAGCAGATGGTGGCGGATCTGAAGAGCGATTC
CGAGTTGAAGTTGGTGCCGAAGGCGGGTCATTTACCGATGCTGGAGAATG
CGGCGGCGTTCACGGCGGTGGTGAATGAGTACCTGCACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001760-T1.utr5p1 | KJC3_001760-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001760-T1.utr3p1 | KJC3_001760-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0033259 |
| DBxref | InterPro:IPR011008 |
| DBxref | InterPro:IPR003497 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12146 |
| DBxref | PFAM:PF12697 |
| DBxref | PFAM:PF00561 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:608620..610732 + |
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