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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:614224..617161- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001763-T1 ID=KJC3_001763-T1|Name=KJC3_001763-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2938bp|location=Sequence derived from alignment at ch2:614224..617161- (Aspergillus niger KJC3)
AGCCATGATGGAAACAAGGGTAAGTATCTAACTATCACCAGTTAAGAAGG
GAATCAGGCTGACGCTAGGCAGAACAGACCAGGGGAAGTCTCTGCCTGTC
TCCGACCGCTAGTTTCCTCGAGGCCCATTCGCTATTCGAGCTACTTGCTC
CCAGCAGGTGTCTAGGCTCTGCGCGATCGCATCCAGACCAGTGAATAATG
CAGAGTCCATTAGGCAGACATGCATGTCAACCCGCGTCCCACGTTGCTTG
CCGCATCCCACAGCCTCCCTGCGTCGAAGATCCACGGAGGCTCTGCTCTG
TTGTCGTCCACTCATTCAGGACTCTTCTTCACTACTCCTGAAATCTCGAG
AGTGGTGGTCATGTAGTAGACAACTGATGTCATCTGTCCCCAGGGAATCC
TCTTGACCTCGTCCCTGGTGCCCGGCTGACTGATTTCTCTACTTGCCCCT
GTGACCGATCGAGCAGCCACACTCCATCGCCACACTGGCTCTGCCTCTGT
GAACTCTACATTCACCACACGCACAACATCCTAGCTGTTGGTAAGGCTGG
AGAAAGCTCCAGCTGTGGTGATACCTTGCTCAAGCAAACCCCCCTCGCAG
CGGTCGCTCAGCCATAGAGCGAGTAAGAAGCAGCCATGGCCCGGCTGATC
GCGACGCCCGGTCATTGTTGCCGCGATGCGCAATATTTAACTTAAAACCC
ACAGAGTCGCGGCTCGCACCCGACCAGGATATTCATCATCAGGAACGATC
ATCTTTATGAGATCGTTTGCTATTTTAGATTCTGCCCTTCCCTTTCTTTG
TTCTGTGATTTCCTTCTTTCCCTCTGCCCTCTTCACCTGCGAACACGCGC
GGTTCACTCGTCTTCGTCTTTTCTTTCCCCTTCCCTTCCTTCCCCCTCCT
TCACTATCAGGCGCGGTGAACCCATGACTTCACTCACATGTCTTGGATCC
ATGACATCGTCGCGACGCGCTGTTTTCTACAAAGTCTTCAAATGAAAACA
GTACTTCCGTCTGCTTTTGTACACTGTCACAATGTGCCCCGTCTGTCTAT
AGTAGTGAGCTTTACGGACACTACCGTGCAAAAGTGGCCGCGATACGCCT
ACATCTACGCCTCATACCGATTTATACCGCACGGTGCGTGCCTGATCCAG
CATCGCTGTGCAAGATAGGGCATGTGCATCATCGAAGAGTATACAGTCTC
GTACCCTGACATCCGACGAAGGCGGGTCCTTCAGCGGTGCCTCTTGGGGA
GATCGTTTGGGTACTGCTATCGCACCCAGGTGGTCAGCCCTGGCGAGCGC
GTCCCTGAGCGCCCCGCCAGTCAATTCCAATACGCTCAGCCTAGAACCGC
CCATCGACCAGCCATGCGGTCTCTGCGCCATTTGATTGTCGATCCGCGGG
AGCAGCCGGCGCGGAGGAGACGGTCCCCAAGCTATCCGCGACGGATGCCC
TCACGACGGAGTGATCCTTTCCGAGTTTTCTTTCCGTTTCTTCGGCGGGC
TTCTGACAGCGATGATGTATGGAAGGGCGACGAATATCGGCCGCGAGGTC
GGGGACGATCGCCTCGGCCTGTCATTGTGACACCAGATGTACCGCCCATC
AATCGTGAACCCCGGGGTATTCCAAGAAGACGGCCTCTAGGTTCGAAAAT
CAGGGTGGTCTCCCCACCACCAGAGCCTCTATACAAGGAGGAACCAATGC
GACCACGCCGCGGAATGTCACCTGCTTCACCTTCTCTCTCACCCCGGAAT
CCAGGTATTATCCGTCATCCGGTCATCATTCATCAGGAGTCAAAGCCACG
GCCAAGTCCGATCCCTTCTTCCAGCTCATCCGGATATCAGTTCAGGAATC
CATGGCGCAATAGATCTCCATCTCCAGGTCCATCCAACTGGCATCGCAAG
GGACCACGGCCGAGTCCGTCTTCGTCTCCAGGACCACCGAAACCTCAGGA
GGAGCCACAGCCACAACTATCACCAGTAGGAGTACCAAGTACTGATGCTC
CAGCAGCACCTCTCACCCCACCCCGGAAGAGAGAGCGACGCCCCAGGGAG
CGTTCCCCATCTATCGAGCGTGTACAAGTTCGCAAAACACGTTCTTCCCC
AACCGTTCCGGTGGAGGTGCACAACCCTCCAGCTCCAGACAGCAGCCCCA
AACCGGTGCCAGCGTCAAGCACCCCATCTCCAGGGAGTGGGCCCCGCCAC
GTGCAGTTTTCCGACATAGTGGACCACCTCTCCATATCCGGTGAGAGCAA
TGTGCCCTCTTCTCCGACCGGCCCTCCGCGCTTCTATAGACAGTTTGGCA
GCGCAAGCCGCCGTAGGTCACCGACTCCTGGACCTACCCCCAGACTAGGA
GGAGGAAGAGGTCGCTCAAGCTCAGAAAGGATTAGATATGTGTATGCGTC
TCCTGCTGCGAGTCGTTCATATCCCCCGGGCGTTGAGGTGCTGATTGTGA
CTCCGCGCAGGTATCGGCCGGAAGGAATCACCCTACCACTAAGTCGGGCG
ACCGATATTTGCGAGGTTGAGCCTGGGAGAAGGAGTTCATCGTCTGGACG
GGCTGCTAGGGGGGTTTTGGACGGGAGCGGTTTGCGGGTGGAGGCTCGGC
GTAGACGTGGGATGGGGAGGGAGGAGCTGGGAAGTAGCGCGAGACCGAGG
ATCATATCACTGTCACCACCCAGAGGGCGATGGAGACCGAGAGTGGGTGG
GACTGAGCGGTATGGGGGTTTCGACTTGGGAGATGGACGCGTCGTTAGGG
ATCAGGGTGGTTCGGCGCGTGTGTGGAGATGGCTGTGAGAGATGTGGATC
ATGGTGGAAGTTTGTAAGATGTTATTGTCAGAGGAGACCTTTCGGATTAT
TTCTTATGTTTATTGTGTTGATTATCTTGATGAAAAAAACATTTTCTGAG
AGCCCATATTAGATTAAAAATGTTATGGCAATTAGCTG back to topCoding sequence (CDS) from alignment at ch2:614224..617161- >KJC3_001763-T1 ID=KJC3_001763-T1|Name=KJC3_001763-T1|organism=Aspergillus niger KJC3|type=CDS|length=3096bp|location=Sequence derived from alignment at ch2:614224..617161- (Aspergillus niger KJC3)
GTATCGGCCGGAAGGAATCACCCTACCACTAAGTCGGGCGACCGATATTT
GCGAGGTTGAGCCTGGGAGAAGGAGTTCATCGTCTGGACGGGCTGCTAGG
GGGGTTTTGGACGGGAGCGGTTTGCGGGTGGAGGCTCGGCGTAGACGTGG
GATGGGGAGGGAGGAGCTGGGAAGTAGCGCGAGACCGAGGATCATATCAC
TGTCACCACCCAGAGGGCGATGGAGACCGAGAGTGGGTGGGACTGAGCGG
TATGGGGGTTTCGACTTGGGAGATGGACGCGTCGTTAGGGATCAGGGTGG
TTCGGCGCGTGTGTGGAGATGGCTGTGAATGTGCATCATCGAAGAGTATA
CAGTCTCGTACCCTGACATCCGACGAAGGCGGGTCCTTCAGCGGTGCCTC
TTGGGGAGATCGTTTGGGTACTGCTATCGCACCCAGGTGGTCAGCCCTGG
CGAGCGCGTCCCTGAGCGCCCCGCCAGTCAATTCCAATACGCTCAGCCTA
GAACCGCCCATCGACCAGCCATGCGGTCTCTGCGCCATTTGATTGTCGAT
CCGCGGGAGCAGCCGGCGCGGAGGAGACGGTCCCCAAGCTATCCGCGACG
GATGCCCTCACGACGGAGTGATCCTTTCCGAGTTTTCTTTCCGTTTCTTC
GGCGGGCTTCTGACAGCGATGATGTATGGAAGGGCGACGAATATCGGCCG
CGAGGTCGGGGACGATCGCCTCGGCCTGTCATTGTGACACCAGATGTACC
GCCCATCAATCGTGAACCCCGGGGTATTCCAAGAAGACGGCCTCTAGGTT
CGAAAATCAGGGTGGTCTCCCCACCACCAGAGCCTCTATACAAGGAGGAA
CCAATGCGACCACGCCGCGGAATGTCACCTGCTTCACCTTCTCTCTCACC
CCGGAATCCAGGTATTATCCGTCATCCGGTCATCATTCATCAGGAGTCAA
AGCCACGGCCAAGTCCGATCCCTTCTTCCAGCTCATCCGGATATCAGTTC
AGGAATCCATGGCGCAATAGATCTCCATCTCCAGGTCCATCCAACTGGCA
TCGCAAGGGACCACGGCCGAGTCCGTCTTCGTCTCCAGGACCACCGAAAC
CTCAGGAGGAGCCACAGCCACAACTATCACCAGTAGGAGTACCAAGTACT
GATGCTCCAGCAGCACCTCTCACCCCACCCCGGAAGAGAGAGCGACGCCC
CAGGGAGCGTTCCCCATCTATCGAGCGTGTACAAGTTCGCAAAACACGTT
CTTCCCCAACCGTTCCGGTGGAGGTGCACAACCCTCCAGCTCCAGACAGC
AGCCCCAAACCGGTGCCAGCGTCAAGCACCCCATCTCCAGGGAGTGGGCC
CCGCCACGTGCAGTTTTCCGACATAGTGGACCACCTCTCCATATCCGGTG
AGAGCAATGTGCCCTCTTCTCCGACCGGCCCTCCGCGCTTCTATAGACAG
TTTGGCAGCGCAAGCCGCCGTAGGTCACCGACTCCTGGACCTACCCCCAG
ACTAGGAGGAGGAAGAGGTCGCTCAAGCTCAGAAAGGATTAGATATGTGT
ATCGGCCGGAAGGAATCACCCTACCACTAAGTCGGGCGACCGATATTTGC
GAGGTTGAGCCTGGGAGAAGGAGTTCATCGTCTGGACGGGCTGCTAGGGG
GGTTTTGGACGGGAGCGGTTTGCGGGTGGAGGCTCGGCGTAGACGTGGGA
TGGGGAGGGAGGAGCTGGGAAGTAGCGCGAGACCGAGGATCATATCACTG
TCACCACCCAGAGGGCGATGGAGACCGAGAGTGGGTGGGACTGAGCGGTA
TGGGGGTTTCGACTTGGGAGATGGACGCGTCGTTAGGGATCAGGGTGGTT
CGGCGCGTGTGTGGAGATGGCTGTGAATGTGCATCATCGAAGAGTATACA
GTCTCGTACCCTGACATCCGACGAAGGCGGGTCCTTCAGCGGTGCCTCTT
GGGGAGATCGTTTGGGTACTGCTATCGCACCCAGGTGGTCAGCCCTGGCG
AGCGCGTCCCTGAGCGCCCCGCCAGTCAATTCCAATACGCTCAGCCTAGA
ACCGCCCATCGACCAGCCATGCGGTCTCTGCGCCATTTGATTGTCGATCC
GCGGGAGCAGCCGGCGCGGAGGAGACGGTCCCCAAGCTATCCGCGACGGA
TGCCCTCACGACGGAGTGATCCTTTCCGAGTTTTCTTTCCGTTTCTTCGG
CGGGCTTCTGACAGCGATGATGTATGGAAGGGCGACGAATATCGGCCGCG
AGGTCGGGGACGATCGCCTCGGCCTGTCATTGTGACACCAGATGTACCGC
CCATCAATCGTGAACCCCGGGGTATTCCAAGAAGACGGCCTCTAGGTTCG
AAAATCAGGGTGGTCTCCCCACCACCAGAGCCTCTATACAAGGAGGAACC
AATGCGACCACGCCGCGGAATGTCACCTGCTTCACCTTCTCTCTCACCCC
GGAATCCAGGTATTATCCGTCATCCGGTCATCATTCATCAGGAGTCAAAG
CCACGGCCAAGTCCGATCCCTTCTTCCAGCTCATCCGGATATCAGTTCAG
GAATCCATGGCGCAATAGATCTCCATCTCCAGGTCCATCCAACTGGCATC
GCAAGGGACCACGGCCGAGTCCGTCTTCGTCTCCAGGACCACCGAAACCT
CAGGAGGAGCCACAGCCACAACTATCACCAGTAGGAGTACCAAGTACTGA
TGCTCCAGCAGCACCTCTCACCCCACCCCGGAAGAGAGAGCGACGCCCCA
GGGAGCGTTCCCCATCTATCGAGCGTGTACAAGTTCGCAAAACACGTTCT
TCCCCAACCGTTCCGGTGGAGGTGCACAACCCTCCAGCTCCAGACAGCAG
CCCCAAACCGGTGCCAGCGTCAAGCACCCCATCTCCAGGGAGTGGGCCCC
GCCACGTGCAGTTTTCCGACATAGTGGACCACCTCTCCATATCCGGTGAG
AGCAATGTGCCCTCTTCTCCGACCGGCCCTCCGCGCTTCTATAGACAGTT
TGGCAGCGCAAGCCGCCGTAGGTCACCGACTCCTGGACCTACCCCCAGAC
TAGGAGGAGGAAGAGGTCGCTCAAGCTCAGAAAGGATTAGATATGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001763-T1.utr3p1 | KJC3_001763-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001763-T1.utr5p1 | KJC3_001763-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:614224..617161 - |
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