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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:663043..664947- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001779-T1 ID=KJC3_001779-T1|Name=KJC3_001779-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1905bp|location=Sequence derived from alignment at ch2:663043..664947- (Aspergillus niger KJC3)
ACTTCATCGCATTTTCTTCCTGTCCACTCCTCCAGAATCTTCCAGGCTAT
TTCATCTATTTCCGATGGAAAGCATGCCTAGTGAGGTGGTATTCTCAACG
GGACCATTGTCTTCCGAATCCGTGGTGTTCCAGTATACCAATGGTCCACT
CAAGGTGTCTCTACCGAAGAGGAGGGGCCGTCCCGCAGGATGTGAGTCCA
CAGACCCATCTACGGTAGACTATCAGTATGGGTTGACCAAGAATAGCGAC
AAAGAAGAAGCGACCCCCCGAGGGGTCCAGTCGTCAGCCCGCCGCCGCTT
CCCACTTCAAGTTCATCAATTTTGGGCCCACGTTGACCCGAATAGATGAA
GAAGCCCGCACCACCACCCGAAGCCACACAATGATCAATCGCCGTCGCCA
AGAACAGAAGAAAGCAGGGAACACTGAAGCCACTGGCTTTGAGCTGTCCC
GTCTGGCCCACACCCATATTCCACATGCATATCCGCAGAGGAACCAGATG
GATCCATTTGGCACGCTGCCCATCGACATGGAGCCATATATGTTTGATCT
TTTTGCGTTTTGTGAGTTGCAAAGGATATATGCTAATTTCTCGGACACTT
CTAGCTAACAAAATGCCTCTGAAGACAAAAATCGCGCATCAGAGACGCTC
TACTCAATTGAGAAGAGAGCCGGCTGTAATCCAATAGATGACTATTGGGT
ACCATTGCTGTTTCAAGACCCAGCAATGCTTCATGTAGTACTGGCGTGTG
GATCGTTATTCACTATGGATCTGCAACGATTTCGAGCAAGCCCTGCATTT
CTTTGGCATACCAGTCAAGCTATGAACATCATTCGGAAAAGACTGGTTGG
TTCTGTGGATGCCCCTTCGGATGAAACAATAGTTGCTGTCGCCAGTATCG
CTATTGCGAAGGTTAGTCAATGTCGTAAATGTTGGGAGGATATGTTGGCT
AATCGTCTCTCAGAAAGCAGCGGGCCAGCACGATCAATGGGAGGTTGACA
TGAGAATACTGAAAGCGTTGGTTGACTTGCGAGGAGGTTTGGACGCATTA
GATGACAAGCCGATGGTACAGGGAAAAATCTACCGGTTAGCTGCCTGTCC
CTGCTTGAGTTCCGGATAGACTCTTACTTGGTCTCCTAGGGCCGATATCA
ATGGATCCTTAGACGTTGGACGGAAGCCCATTTTCAGTGATCGGTTCCAG
CAGTCTCCAATGCCGGATCCTAGAGATTACCGATTAGTTCAAGGTTTCCA
AGAGCTGGATTGTGTTCTGGGCATAGAGAGTGCACTGAAAGCAGTGATCG
ACGATATACAATCCTTAGTCGAGGAGTTCTCCAGTATTACAAAGAGCAGC
GGTCAAACCGTCGTTGCGAGGATCCGTTTCTGGCTGACGTCAATCCAGTA
TACACTTCTTTCACTGCAATATAGTGACGATTGTTCCAGAGTTCAAGCCC
AGGAGGTCTGCCGTCTAAGCCTTTTACTACTGATCAACGCGGTCTTTCAT
GAGTCTCCTCCTGGTGCATCGACCAGTGATGTACTTATCTCACAGCTGCG
GCGGCTTCTGGAGAATGCTGAAGTGTTGGACTGGTTTCCGCTCACCTTTC
GTCTTTGGGCCCTATACCTTGCTACTTGCAATGTTGCATCTTCCACACTG
AGAGTTTGGTCGATTGCAGCCATCTCGGAAGTGGTGCTGCAAATGGGCAT
CGCAGATGAAGAGGAGTTCAGTCGACGACTCACGTTGTTCCCATTTGACC
CGCCTACACATAATGTCATCTGTCCAACAATATGGGACGAGGTACAATTC
TTTATTCAGAATCAGGCGAGAGGGTAACCGGCGAGTCCGTATTGGCTGCA
ATAAAGAAGACATAGTAGAACGGGGAGCATCATATGTTCTTATTTTCCAT
GATAG back to topCoding sequence (CDS) from alignment at ch2:663043..664947- >KJC3_001779-T1 ID=KJC3_001779-T1|Name=KJC3_001779-T1|organism=Aspergillus niger KJC3|type=CDS|length=7695bp|location=Sequence derived from alignment at ch2:663043..664947- (Aspergillus niger KJC3)
GGCCGATATCAATGGATCCTTAGACGTTGGACGGAAGCCCATTTTCAGTG
ATCGGTTCCAGCAGTCTCCAATGCCGGATCCTAGAGATTACCGATTAGTT
CAAGGTTTCCAAGAGCTGGATTGTGTTCTGGGCATAGAGAGTGCACTGAA
AGCAGTGATCGACGATATACAATCCTTAGTCGAGGAGTTCTCCAGTATTA
CAAAGAGCAGCGGTCAAACCGTCGTTGCGAGGATCCGTTTCTGGCTGACG
TCAATCCAGTATACACTTCTTTCACTGCAATATAGTGACGATTGTTCCAG
AGTTCAAGCCCAGGAGGTCTGCCGTCTAAGCCTTTTACTACTGATCAACG
CGGTCTTTCATGAGTCTCCTCCTGGTGCATCGACCAGTGATGTACTTATC
TCACAGCTGCGGCGGCTTCTGGAGAATGCTGAAGTGTTGGACTGGTTTCC
GCTCACCTTTCGTCTTTGGGCCCTATACCTTGCTACTTGCAATGTTGCAT
CTTCCACACTGAGAGTTTGGTCGATTGCAGCCATCTCGGAAGTGGTGCTG
CAAATGGGCATCGCAGATGAAGAGGAGTTCAGTCGACGACTCACGTTGTT
CCCATTTGACCCGCCTACACATAATGTCATCTGTCCAACAATATGGGACG
AGGTACAATTCTTTATTCAGAATCAGGCGAGAGGGTAAAAAGCAGCGGGC
CAGCACGATCAATGGGAGGTTGACATGAGAATACTGAAAGCGTTGGTTGA
CTTGCGAGGAGGTTTGGACGCATTAGATGACAAGCCGATGGTACAGGGAA
AAATCTACCGACAAAAATCGCGCATCAGAGACGCTCTACTCAATTGAGAA
GAGAGCCGGCTGTAATCCAATAGATGACTATTGGGTACCATTGCTGTTTC
AAGACCCAGCAATGCTTCATGTAGTACTGGCGTGTGGATCGTTATTCACT
ATGGATCTGCAACGATTTCGAGCAAGCCCTGCATTTCTTTGGCATACCAG
TCAAGCTATGAACATCATTCGGAAAAGACTGGTTGGTTCTGTGGATGCCC
CTTCGGATGAAACAATAGTTGCTGTCGCCAGTATCGCTATTGCGAAGCGA
CAAAGAAGAAGCGACCCCCCGAGGGGTCCAGTCGTCAGCCCGCCGCCGCT
TCCCACTTCAAGTTCATCAATTTTGGGCCCACGTTGACCCGAATAGATGA
AGAAGCCCGCACCACCACCCGAAGCCACACAATGATCAATCGCCGTCGCC
AAGAACAGAAGAAAGCAGGGAACACTGAAGCCACTGGCTTTGAGCTGTCC
CGTCTGGCCCACACCCATATTCCACATGCATATCCGCAGAGGAACCAGAT
GGATCCATTTGGCACGCTGCCCATCGACATGGAGCCATATATGTTTGATC
TTTTTGCGTTTTATGGAAAGCATGCCTAGTGAGGTGGTATTCTCAACGGG
ACCATTGTCTTCCGAATCCGTGGTGTTCCAGTATACCAATGGTCCACTCA
AGGTGTCTCTACCGAAGAGGAGGGGCCGTCCCGCAGGATGGCCGATATCA
ATGGATCCTTAGACGTTGGACGGAAGCCCATTTTCAGTGATCGGTTCCAG
CAGTCTCCAATGCCGGATCCTAGAGATTACCGATTAGTTCAAGGTTTCCA
AGAGCTGGATTGTGTTCTGGGCATAGAGAGTGCACTGAAAGCAGTGATCG
ACGATATACAATCCTTAGTCGAGGAGTTCTCCAGTATTACAAAGAGCAGC
GGTCAAACCGTCGTTGCGAGGATCCGTTTCTGGCTGACGTCAATCCAGTA
TACACTTCTTTCACTGCAATATAGTGACGATTGTTCCAGAGTTCAAGCCC
AGGAGGTCTGCCGTCTAAGCCTTTTACTACTGATCAACGCGGTCTTTCAT
GAGTCTCCTCCTGGTGCATCGACCAGTGATGTACTTATCTCACAGCTGCG
GCGGCTTCTGGAGAATGCTGAAGTGTTGGACTGGTTTCCGCTCACCTTTC
GTCTTTGGGCCCTATACCTTGCTACTTGCAATGTTGCATCTTCCACACTG
AGAGTTTGGTCGATTGCAGCCATCTCGGAAGTGGTGCTGCAAATGGGCAT
CGCAGATGAAGAGGAGTTCAGTCGACGACTCACGTTGTTCCCATTTGACC
CGCCTACACATAATGTCATCTGTCCAACAATATGGGACGAGGTACAATTC
TTTATTCAGAATCAGGCGAGAGGGTAAAAAGCAGCGGGCCAGCACGATCA
ATGGGAGGTTGACATGAGAATACTGAAAGCGTTGGTTGACTTGCGAGGAG
GTTTGGACGCATTAGATGACAAGCCGATGGTACAGGGAAAAATCTACCGA
CAAAAATCGCGCATCAGAGACGCTCTACTCAATTGAGAAGAGAGCCGGCT
GTAATCCAATAGATGACTATTGGGTACCATTGCTGTTTCAAGACCCAGCA
ATGCTTCATGTAGTACTGGCGTGTGGATCGTTATTCACTATGGATCTGCA
ACGATTTCGAGCAAGCCCTGCATTTCTTTGGCATACCAGTCAAGCTATGA
ACATCATTCGGAAAAGACTGGTTGGTTCTGTGGATGCCCCTTCGGATGAA
ACAATAGTTGCTGTCGCCAGTATCGCTATTGCGAAGCGACAAAGAAGAAG
CGACCCCCCGAGGGGTCCAGTCGTCAGCCCGCCGCCGCTTCCCACTTCAA
GTTCATCAATTTTGGGCCCACGTTGACCCGAATAGATGAAGAAGCCCGCA
CCACCACCCGAAGCCACACAATGATCAATCGCCGTCGCCAAGAACAGAAG
AAAGCAGGGAACACTGAAGCCACTGGCTTTGAGCTGTCCCGTCTGGCCCA
CACCCATATTCCACATGCATATCCGCAGAGGAACCAGATGGATCCATTTG
GCACGCTGCCCATCGACATGGAGCCATATATGTTTGATCTTTTTGCGTTT
TATGGAAAGCATGCCTAGTGAGGTGGTATTCTCAACGGGACCATTGTCTT
CCGAATCCGTGGTGTTCCAGTATACCAATGGTCCACTCAAGGTGTCTCTA
CCGAAGAGGAGGGGCCGTCCCGCAGGATGGCCGATATCAATGGATCCTTA
GACGTTGGACGGAAGCCCATTTTCAGTGATCGGTTCCAGCAGTCTCCAAT
GCCGGATCCTAGAGATTACCGATTAGTTCAAGGTTTCCAAGAGCTGGATT
GTGTTCTGGGCATAGAGAGTGCACTGAAAGCAGTGATCGACGATATACAA
TCCTTAGTCGAGGAGTTCTCCAGTATTACAAAGAGCAGCGGTCAAACCGT
CGTTGCGAGGATCCGTTTCTGGCTGACGTCAATCCAGTATACACTTCTTT
CACTGCAATATAGTGACGATTGTTCCAGAGTTCAAGCCCAGGAGGTCTGC
CGTCTAAGCCTTTTACTACTGATCAACGCGGTCTTTCATGAGTCTCCTCC
TGGTGCATCGACCAGTGATGTACTTATCTCACAGCTGCGGCGGCTTCTGG
AGAATGCTGAAGTGTTGGACTGGTTTCCGCTCACCTTTCGTCTTTGGGCC
CTATACCTTGCTACTTGCAATGTTGCATCTTCCACACTGAGAGTTTGGTC
GATTGCAGCCATCTCGGAAGTGGTGCTGCAAATGGGCATCGCAGATGAAG
AGGAGTTCAGTCGACGACTCACGTTGTTCCCATTTGACCCGCCTACACAT
AATGTCATCTGTCCAACAATATGGGACGAGGTACAATTCTTTATTCAGAA
TCAGGCGAGAGGGTAAAAAGCAGCGGGCCAGCACGATCAATGGGAGGTTG
ACATGAGAATACTGAAAGCGTTGGTTGACTTGCGAGGAGGTTTGGACGCA
TTAGATGACAAGCCGATGGTACAGGGAAAAATCTACCGACAAAAATCGCG
CATCAGAGACGCTCTACTCAATTGAGAAGAGAGCCGGCTGTAATCCAATA
GATGACTATTGGGTACCATTGCTGTTTCAAGACCCAGCAATGCTTCATGT
AGTACTGGCGTGTGGATCGTTATTCACTATGGATCTGCAACGATTTCGAG
CAAGCCCTGCATTTCTTTGGCATACCAGTCAAGCTATGAACATCATTCGG
AAAAGACTGGTTGGTTCTGTGGATGCCCCTTCGGATGAAACAATAGTTGC
TGTCGCCAGTATCGCTATTGCGAAGCGACAAAGAAGAAGCGACCCCCCGA
GGGGTCCAGTCGTCAGCCCGCCGCCGCTTCCCACTTCAAGTTCATCAATT
TTGGGCCCACGTTGACCCGAATAGATGAAGAAGCCCGCACCACCACCCGA
AGCCACACAATGATCAATCGCCGTCGCCAAGAACAGAAGAAAGCAGGGAA
CACTGAAGCCACTGGCTTTGAGCTGTCCCGTCTGGCCCACACCCATATTC
CACATGCATATCCGCAGAGGAACCAGATGGATCCATTTGGCACGCTGCCC
ATCGACATGGAGCCATATATGTTTGATCTTTTTGCGTTTTATGGAAAGCA
TGCCTAGTGAGGTGGTATTCTCAACGGGACCATTGTCTTCCGAATCCGTG
GTGTTCCAGTATACCAATGGTCCACTCAAGGTGTCTCTACCGAAGAGGAG
GGGCCGTCCCGCAGGATGGCCGATATCAATGGATCCTTAGACGTTGGACG
GAAGCCCATTTTCAGTGATCGGTTCCAGCAGTCTCCAATGCCGGATCCTA
GAGATTACCGATTAGTTCAAGGTTTCCAAGAGCTGGATTGTGTTCTGGGC
ATAGAGAGTGCACTGAAAGCAGTGATCGACGATATACAATCCTTAGTCGA
GGAGTTCTCCAGTATTACAAAGAGCAGCGGTCAAACCGTCGTTGCGAGGA
TCCGTTTCTGGCTGACGTCAATCCAGTATACACTTCTTTCACTGCAATAT
AGTGACGATTGTTCCAGAGTTCAAGCCCAGGAGGTCTGCCGTCTAAGCCT
TTTACTACTGATCAACGCGGTCTTTCATGAGTCTCCTCCTGGTGCATCGA
CCAGTGATGTACTTATCTCACAGCTGCGGCGGCTTCTGGAGAATGCTGAA
GTGTTGGACTGGTTTCCGCTCACCTTTCGTCTTTGGGCCCTATACCTTGC
TACTTGCAATGTTGCATCTTCCACACTGAGAGTTTGGTCGATTGCAGCCA
TCTCGGAAGTGGTGCTGCAAATGGGCATCGCAGATGAAGAGGAGTTCAGT
CGACGACTCACGTTGTTCCCATTTGACCCGCCTACACATAATGTCATCTG
TCCAACAATATGGGACGAGGTACAATTCTTTATTCAGAATCAGGCGAGAG
GGTAAAAAGCAGCGGGCCAGCACGATCAATGGGAGGTTGACATGAGAATA
CTGAAAGCGTTGGTTGACTTGCGAGGAGGTTTGGACGCATTAGATGACAA
GCCGATGGTACAGGGAAAAATCTACCGACAAAAATCGCGCATCAGAGACG
CTCTACTCAATTGAGAAGAGAGCCGGCTGTAATCCAATAGATGACTATTG
GGTACCATTGCTGTTTCAAGACCCAGCAATGCTTCATGTAGTACTGGCGT
GTGGATCGTTATTCACTATGGATCTGCAACGATTTCGAGCAAGCCCTGCA
TTTCTTTGGCATACCAGTCAAGCTATGAACATCATTCGGAAAAGACTGGT
TGGTTCTGTGGATGCCCCTTCGGATGAAACAATAGTTGCTGTCGCCAGTA
TCGCTATTGCGAAGCGACAAAGAAGAAGCGACCCCCCGAGGGGTCCAGTC
GTCAGCCCGCCGCCGCTTCCCACTTCAAGTTCATCAATTTTGGGCCCACG
TTGACCCGAATAGATGAAGAAGCCCGCACCACCACCCGAAGCCACACAAT
GATCAATCGCCGTCGCCAAGAACAGAAGAAAGCAGGGAACACTGAAGCCA
CTGGCTTTGAGCTGTCCCGTCTGGCCCACACCCATATTCCACATGCATAT
CCGCAGAGGAACCAGATGGATCCATTTGGCACGCTGCCCATCGACATGGA
GCCATATATGTTTGATCTTTTTGCGTTTTATGGAAAGCATGCCTAGTGAG
GTGGTATTCTCAACGGGACCATTGTCTTCCGAATCCGTGGTGTTCCAGTA
TACCAATGGTCCACTCAAGGTGTCTCTACCGAAGAGGAGGGGCCGTCCCG
CAGGATGGCCGATATCAATGGATCCTTAGACGTTGGACGGAAGCCCATTT
TCAGTGATCGGTTCCAGCAGTCTCCAATGCCGGATCCTAGAGATTACCGA
TTAGTTCAAGGTTTCCAAGAGCTGGATTGTGTTCTGGGCATAGAGAGTGC
ACTGAAAGCAGTGATCGACGATATACAATCCTTAGTCGAGGAGTTCTCCA
GTATTACAAAGAGCAGCGGTCAAACCGTCGTTGCGAGGATCCGTTTCTGG
CTGACGTCAATCCAGTATACACTTCTTTCACTGCAATATAGTGACGATTG
TTCCAGAGTTCAAGCCCAGGAGGTCTGCCGTCTAAGCCTTTTACTACTGA
TCAACGCGGTCTTTCATGAGTCTCCTCCTGGTGCATCGACCAGTGATGTA
CTTATCTCACAGCTGCGGCGGCTTCTGGAGAATGCTGAAGTGTTGGACTG
GTTTCCGCTCACCTTTCGTCTTTGGGCCCTATACCTTGCTACTTGCAATG
TTGCATCTTCCACACTGAGAGTTTGGTCGATTGCAGCCATCTCGGAAGTG
GTGCTGCAAATGGGCATCGCAGATGAAGAGGAGTTCAGTCGACGACTCAC
GTTGTTCCCATTTGACCCGCCTACACATAATGTCATCTGTCCAACAATAT
GGGACGAGGTACAATTCTTTATTCAGAATCAGGCGAGAGGGTAAAAAGCA
GCGGGCCAGCACGATCAATGGGAGGTTGACATGAGAATACTGAAAGCGTT
GGTTGACTTGCGAGGAGGTTTGGACGCATTAGATGACAAGCCGATGGTAC
AGGGAAAAATCTACCGACAAAAATCGCGCATCAGAGACGCTCTACTCAAT
TGAGAAGAGAGCCGGCTGTAATCCAATAGATGACTATTGGGTACCATTGC
TGTTTCAAGACCCAGCAATGCTTCATGTAGTACTGGCGTGTGGATCGTTA
TTCACTATGGATCTGCAACGATTTCGAGCAAGCCCTGCATTTCTTTGGCA
TACCAGTCAAGCTATGAACATCATTCGGAAAAGACTGGTTGGTTCTGTGG
ATGCCCCTTCGGATGAAACAATAGTTGCTGTCGCCAGTATCGCTATTGCG
AAGCGACAAAGAAGAAGCGACCCCCCGAGGGGTCCAGTCGTCAGCCCGCC
GCCGCTTCCCACTTCAAGTTCATCAATTTTGGGCCCACGTTGACCCGAAT
AGATGAAGAAGCCCGCACCACCACCCGAAGCCACACAATGATCAATCGCC
GTCGCCAAGAACAGAAGAAAGCAGGGAACACTGAAGCCACTGGCTTTGAG
CTGTCCCGTCTGGCCCACACCCATATTCCACATGCATATCCGCAGAGGAA
CCAGATGGATCCATTTGGCACGCTGCCCATCGACATGGAGCCATATATGT
TTGATCTTTTTGCGTTTTATGGAAAGCATGCCTAGTGAGGTGGTATTCTC
AACGGGACCATTGTCTTCCGAATCCGTGGTGTTCCAGTATACCAATGGTC
CACTCAAGGTGTCTCTACCGAAGAGGAGGGGCCGTCCCGCAGGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001779-T1.utr3p1 | KJC3_001779-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001779-T1.utr5p1 | KJC3_001779-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:663043..664947 - |
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