You are here

Home

KJC3_001795-T1, KJC3_001795-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001795-T1
Unique NameKJC3_001795-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:698812..699324+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001795-T1 ID=KJC3_001795-T1|Name=KJC3_001795-T1|organism=Aspergillus niger KJC3|type=mRNA|length=513bp|location=Sequence derived from alignment at ch2:698812..699324+ (Aspergillus niger KJC3)
ATGCAGTTCACCAAGTCTATCGTGGCTACCGCCCTTGCTCTCTTTGCAGC
CAGCGCTGTTGCAACCACAGTCGATGTATGCTTAAGAATTATCTCATGCC
TTCTCACTCGATATCACTATATCGAGGTCCCTTCTATGTCTATCTGCTAA
TCAATTATGGCTCTAGATTGCCTACACCTCTAATGGCGTTTACTACAACC
AGCAAGTGGAGGCTGATGTCTATACTCAATTGACTGCGCCGTATGTTCCC
TGCCTTGTCAAATCCCTTGTACAAATGCATTGCTAATGACTCTACAGTGG
ATCCATCAGCACTTTCCAGAACACTGCCAATTGCTATCTCTTCTCGTACT
TATCACCCTTCCCATTGAAATGATTATACCCGGTATTGCCACTAACATGA
ACCGCTATAGCTACTCTGGCCAGGAGGTCTACTATGCTGCCGCGGGTGCG
ACGAACATCAACCCCCCAGTCTATGCTGCATTCGTCCAGTGCCAAGACCC
CTCCTCTACCTAA
back to top

Coding sequence (CDS) from alignment at ch2:698812..699324+

>KJC3_001795-T1 ID=KJC3_001795-T1|Name=KJC3_001795-T1|organism=Aspergillus niger KJC3|type=CDS|length=1200bp|location=Sequence derived from alignment at ch2:698812..699324+ (Aspergillus niger KJC3)
ATGCAGTTCACCAAGTCTATCGTGGCTACCGCCCTTGCTCTCTTTGCAGC
CAGCGCTGTTGCAACCACAGTCGATATTGCCTACACCTCTAATGGCGTTT
ACTACAACCAGCAAGTGGAGGCTGATGTCTATACTCAATTGACTGCGCCT
GGATCCATCAGCACTTTCCAGAACACTGCCAATTGCTATCTCTTCTCCTA
CTCTGGCCAGGAGGTCTACTATGCTGCCGCGGGTGCGACGAACATCAACC
CCCCAGTCTATGCTGCATTCGTCCAGTGCCAAGACCCCTCCTCTACCTAA
ATGCAGTTCACCAAGTCTATCGTGGCTACCGCCCTTGCTCTCTTTGCAGC
CAGCGCTGTTGCAACCACAGTCGATATTGCCTACACCTCTAATGGCGTTT
ACTACAACCAGCAAGTGGAGGCTGATGTCTATACTCAATTGACTGCGCCT
GGATCCATCAGCACTTTCCAGAACACTGCCAATTGCTATCTCTTCTCCTA
CTCTGGCCAGGAGGTCTACTATGCTGCCGCGGGTGCGACGAACATCAACC
CCCCAGTCTATGCTGCATTCGTCCAGTGCCAAGACCCCTCCTCTACCTAA
ATGCAGTTCACCAAGTCTATCGTGGCTACCGCCCTTGCTCTCTTTGCAGC
CAGCGCTGTTGCAACCACAGTCGATATTGCCTACACCTCTAATGGCGTTT
ACTACAACCAGCAAGTGGAGGCTGATGTCTATACTCAATTGACTGCGCCT
GGATCCATCAGCACTTTCCAGAACACTGCCAATTGCTATCTCTTCTCCTA
CTCTGGCCAGGAGGTCTACTATGCTGCCGCGGGTGCGACGAACATCAACC
CCCCAGTCTATGCTGCATTCGTCCAGTGCCAAGACCCCTCCTCTACCTAA
ATGCAGTTCACCAAGTCTATCGTGGCTACCGCCCTTGCTCTCTTTGCAGC
CAGCGCTGTTGCAACCACAGTCGATATTGCCTACACCTCTAATGGCGTTT
ACTACAACCAGCAAGTGGAGGCTGATGTCTATACTCAATTGACTGCGCCT
GGATCCATCAGCACTTTCCAGAACACTGCCAATTGCTATCTCTTCTCCTA
CTCTGGCCAGGAGGTCTACTATGCTGCCGCGGGTGCGACGAACATCAACC
CCCCAGTCTATGCTGCATTCGTCCAGTGCCAAGACCCCTCCTCTACCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001795KJC3_001795Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001795-T1.exon1KJC3_001795-T1.exon1Aspergillus niger KJC3exon
KJC3_001795-T1.exon2KJC3_001795-T1.exon2Aspergillus niger KJC3exon
KJC3_001795-T1.exon3KJC3_001795-T1.exon3Aspergillus niger KJC3exon
KJC3_001795-T1.exon4KJC3_001795-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001795-T1.cdsKJC3_001795-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001795-T1KJC3_001795-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:698812..699324 +
Powered by Drupal