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KJC3_001801-T1, KJC3_001801-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001801-T1
Unique NameKJC3_001801-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:711878..713399-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001801-T1 ID=KJC3_001801-T1|Name=KJC3_001801-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1522bp|location=Sequence derived from alignment at ch2:711878..713399- (Aspergillus niger KJC3)
GTCAGTCATGGTCGAAGCAAATAACCGACCATACTTCTCACAATGTCTCG
AATTTTCTCACATGCAATAAGCATACCAAAGACCTTCTCCCCGCTCAGTA
CCCTGAACCTACGTTATTCCACTGCGGTCCGCACTATCGCCACCATGAGA
AAGCCCGCACCGATAGCAATTGTCGGTGGTGGCCCATGTGGACTTACATT
CGCACGCCTCCTTGAGACTGCCGGAATTGACTATGTCATATTCGAGCGCG
ATATCTCAGCGGAAAATGCCCTCCAATTCCAAGGTGGCACTCTCGACCTT
CACGGAGAAACAGGCCAAGAAGCCCTGCGGCGCGCAGGCCTAATCGAAGA
GTTTGAGAAGCTTGCGCGGCGAGACGCCACGACATTGACAGTGCAAGACT
TCCGTGGTAATCTTCGCAAGACATTTGGCGAAGGCCGCGATGCCCCTGAA
ATCGACCGTCTGCAGCTGCGACAACTACTTCTGAATTCGTTACCAGCACA
TCGCATCAGGTGGGCCAAAGCACTTCAGGGGATTGAACGGACCAGCAAGG
TTGGCTATGGGCATATTGCAGACTGCACACTACGCTTTACCGATGGCTCA
ACAGAAAGCGGTTTCAGACTCGTGGTTGGCGCTGACGGCGCCTGGAGCAA
GGTCCGACCACTGGTAAGTAGCCATTCGTTCACTATTATCATCGCACTTA
CTGAAATATTCTCCTAGATCACCCCCGCAGAGCCACAATACTCTGGAAGA
ATGTTCATTGAAGGTCGCATCTCACCCGGCAACCCGCAGTACGCAGCAGC
ACACGAAATGGTAGGCGCCGGTAACTCTCTAGCCTCGACCCGGGGCTGCA
CCCTCTGCATACAACAGATGTCCGACCGCTCCTACCGCGTCTATATGGGC
CTTGAAGTACCGTCTACATTTACCAGGCCTGGAGGCGAAGGCGACATAAC
CAAGCCCGAGAAAGCGCGCGCTGCAGTATTACAGCACTACGCAGACTGGG
CGCCGCACCTCCGAGCGTTCGTCGAAGCAGCAGAAGAACCCTGGCGTCCG
TGGCCACTGCACCGACTTGACCCAGAGATTTACCTCGACGGAAGTCCGAA
CTGGACACGAGTCCCTGGAGTCACACTGCTAGGAGATGCAGCGCACCTGG
CGACACCGAATGGCGACGGTGTCAACATCGCCATGTATGACGCGTTGGTA
TTGTTCGACTCGCTCATGGAAGAGGTGCGAAAAAAGCAGAGTAACACTTA
CCAGGAAGGTGAAGACGCAGTAGCAGTAGAGCGCGCCATTTCTGCTTATG
AAGCGGACATGCGTGCCCGCGGACGAGCGCATATTCTGGACTCGATAGAC
ATGGAGGACATGATGTTTGCGGAGGATGGAACAGCGCGTATGCTGGCGAT
GATTGGCCAGGGTTGATACTCACTCTTGCACACATACTTTCTGCCTACAT
TATCATTATCACCAGCAATTACTAGATAGTACATGGACATAGCCAAATAC
AATAATTCAACTCACATAAAGC
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Coding sequence (CDS) from alignment at ch2:711878..713399-

>KJC3_001801-T1 ID=KJC3_001801-T1|Name=KJC3_001801-T1|organism=Aspergillus niger KJC3|type=CDS|length=2640bp|location=Sequence derived from alignment at ch2:711878..713399- (Aspergillus niger KJC3)
ATCACCCCCGCAGAGCCACAATACTCTGGAAGAATGTTCATTGAAGGTCG
CATCTCACCCGGCAACCCGCAGTACGCAGCAGCACACGAAATGGTAGGCG
CCGGTAACTCTCTAGCCTCGACCCGGGGCTGCACCCTCTGCATACAACAG
ATGTCCGACCGCTCCTACCGCGTCTATATGGGCCTTGAAGTACCGTCTAC
ATTTACCAGGCCTGGAGGCGAAGGCGACATAACCAAGCCCGAGAAAGCGC
GCGCTGCAGTATTACAGCACTACGCAGACTGGGCGCCGCACCTCCGAGCG
TTCGTCGAAGCAGCAGAAGAACCCTGGCGTCCGTGGCCACTGCACCGACT
TGACCCAGAGATTTACCTCGACGGAAGTCCGAACTGGACACGAGTCCCTG
GAGTCACACTGCTAGGAGATGCAGCGCACCTGGCGACACCGAATGGCGAC
GGTGTCAACATCGCCATGTATGACGCGTTGGTATTGTTCGACTCGCTCAT
GGAAGAGGTGCGAAAAAAGCAGAGTAACACTTACCAGGAAGGTGAAGACG
CAGTAGCAGTAGAGCGCGCCATTTCTGCTTATGAAGCGGACATGCGTGCC
CGCGGACGAGCGCATATTCTGGACTCGATAGACATGGAGGACATGATGTT
TGCGGAGGATGGAACAGCGCGTATGCTGGCGATGATTGGCCAGGGTTGAA
TGTCTCGAATTTTCTCACATGCAATAAGCATACCAAAGACCTTCTCCCCG
CTCAGTACCCTGAACCTACGTTATTCCACTGCGGTCCGCACTATCGCCAC
CATGAGAAAGCCCGCACCGATAGCAATTGTCGGTGGTGGCCCATGTGGAC
TTACATTCGCACGCCTCCTTGAGACTGCCGGAATTGACTATGTCATATTC
GAGCGCGATATCTCAGCGGAAAATGCCCTCCAATTCCAAGGTGGCACTCT
CGACCTTCACGGAGAAACAGGCCAAGAAGCCCTGCGGCGCGCAGGCCTAA
TCGAAGAGTTTGAGAAGCTTGCGCGGCGAGACGCCACGACATTGACAGTG
CAAGACTTCCGTGGTAATCTTCGCAAGACATTTGGCGAAGGCCGCGATGC
CCCTGAAATCGACCGTCTGCAGCTGCGACAACTACTTCTGAATTCGTTAC
CAGCACATCGCATCAGGTGGGCCAAAGCACTTCAGGGGATTGAACGGACC
AGCAAGGTTGGCTATGGGCATATTGCAGACTGCACACTACGCTTTACCGA
TGGCTCAACAGAAAGCGGTTTCAGACTCGTGGTTGGCGCTGACGGCGCCT
GGAGCAAGGTCCGACCACTGATCACCCCCGCAGAGCCACAATACTCTGGA
AGAATGTTCATTGAAGGTCGCATCTCACCCGGCAACCCGCAGTACGCAGC
AGCACACGAAATGGTAGGCGCCGGTAACTCTCTAGCCTCGACCCGGGGCT
GCACCCTCTGCATACAACAGATGTCCGACCGCTCCTACCGCGTCTATATG
GGCCTTGAAGTACCGTCTACATTTACCAGGCCTGGAGGCGAAGGCGACAT
AACCAAGCCCGAGAAAGCGCGCGCTGCAGTATTACAGCACTACGCAGACT
GGGCGCCGCACCTCCGAGCGTTCGTCGAAGCAGCAGAAGAACCCTGGCGT
CCGTGGCCACTGCACCGACTTGACCCAGAGATTTACCTCGACGGAAGTCC
GAACTGGACACGAGTCCCTGGAGTCACACTGCTAGGAGATGCAGCGCACC
TGGCGACACCGAATGGCGACGGTGTCAACATCGCCATGTATGACGCGTTG
GTATTGTTCGACTCGCTCATGGAAGAGGTGCGAAAAAAGCAGAGTAACAC
TTACCAGGAAGGTGAAGACGCAGTAGCAGTAGAGCGCGCCATTTCTGCTT
ATGAAGCGGACATGCGTGCCCGCGGACGAGCGCATATTCTGGACTCGATA
GACATGGAGGACATGATGTTTGCGGAGGATGGAACAGCGCGTATGCTGGC
GATGATTGGCCAGGGTTGAATGTCTCGAATTTTCTCACATGCAATAAGCA
TACCAAAGACCTTCTCCCCGCTCAGTACCCTGAACCTACGTTATTCCACT
GCGGTCCGCACTATCGCCACCATGAGAAAGCCCGCACCGATAGCAATTGT
CGGTGGTGGCCCATGTGGACTTACATTCGCACGCCTCCTTGAGACTGCCG
GAATTGACTATGTCATATTCGAGCGCGATATCTCAGCGGAAAATGCCCTC
CAATTCCAAGGTGGCACTCTCGACCTTCACGGAGAAACAGGCCAAGAAGC
CCTGCGGCGCGCAGGCCTAATCGAAGAGTTTGAGAAGCTTGCGCGGCGAG
ACGCCACGACATTGACAGTGCAAGACTTCCGTGGTAATCTTCGCAAGACA
TTTGGCGAAGGCCGCGATGCCCCTGAAATCGACCGTCTGCAGCTGCGACA
ACTACTTCTGAATTCGTTACCAGCACATCGCATCAGGTGGGCCAAAGCAC
TTCAGGGGATTGAACGGACCAGCAAGGTTGGCTATGGGCATATTGCAGAC
TGCACACTACGCTTTACCGATGGCTCAACAGAAAGCGGTTTCAGACTCGT
GGTTGGCGCTGACGGCGCCTGGAGCAAGGTCCGACCACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001801KJC3_001801Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001801-T1KJC3_001801-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001801-T1.cdsKJC3_001801-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001801-T1.utr3p1KJC3_001801-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001801-T1.exon2KJC3_001801-T1.exon2Aspergillus niger KJC3exon
KJC3_001801-T1.exon1KJC3_001801-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001801-T1.utr5p1KJC3_001801-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002938
DBxrefInterPro:IPR036188
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:711878..713399 -
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