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KJC3_001808-T1, KJC3_001808-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001808-T1
Unique NameKJC3_001808-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:741061..743088-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001808-T1 ID=KJC3_001808-T1|Name=KJC3_001808-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2028bp|location=Sequence derived from alignment at ch2:741061..743088- (Aspergillus niger KJC3)
CTGGCAAGTAAGTGCGAAGGCTTAACCCCTGAACTGAACACAAATCGGCC
TTCCACTGCTGTGCCCATTCTTGAGCATTCTAGATACGACAATTCAGGAC
TTCTCTAGATCGCCTCAACCCTTTATCTTCCATCGGGGGCTGCTTCTACA
AAAGCCACCGCCCTGGCTCCCAGGCCCAGCTGCAGCTTTCTCCGTCGCCT
GAGGAAGAGAATAATGACAGCAGCCCACCCCGGCTTCCGATTTACAAAAC
CCGATCAACAATGAGTCTTGTACATGTCCTGAGTGCCCTGGGGGCATTCG
ATGAAGGGGGGCGAGACCTCTTCCGCCGAACGATCTATGGCCCCGGTGGC
GTCACTCTGGACATTGATCCCCTCCCCAGCACTCAGCGCAAAGGTCTCAT
TGCAGTCTCTGTCATGGCAGTTTTATCCTTCGTAGCGACACTGGCCTTGA
TCTGTTTCATCAGCTACCGACTCATCTTCTGGCGCGGTTCATATGCGCGG
TACATCGGTTACAATCAATATGTCATTCTCATCTACAACCTCGTTTTGGC
CGATCTCCAGCAAGCGCTCGCATTCCTGATCTGCATCAAATGGATTGCAG
AGGATAAAATATCCGCGGATTCGGCAGGTTGTTTCCTCCAGGGATTCTGG
CTGCAGGTAGGAGACCCAGGAAGTGGACTTTTCGTCCTGGCGATCGCCTT
TCATACCTTCCTGCTCGTGGCTCTAGGGCGGAAAATGAGCCATAAAGTCT
TCGTCAGCTTCGTAATTGGAGTTTGGATCTTCGTGGCTGTCCTTGTTATC
ATCCCCCTTGCTGCTCATGGCCGTTACGTCTTTATCCCATCAGGTGCCTG
GGTAAGTCAACCTCTGCCATCGAATTGGGCCAACAACTAAGATTTTGCGC
CTCTAGTGCTGGATCAGCGAAGATTACGAATCGATCCGTCTCTGGACGCA
CTACATCTGGATTTTCTTGGCCGAGTTCGGTACGGTCTGTCTGTACGCTG
TGATGTGGTTCCAGCTCCGGGTCCGGATCAAGCAGTCCGCCATTCTGGGC
AGCAGTCACATCGAAAGTCTCAAGCGCCTTCGCCGCGTTATCGGATACAT
GGTCATCTATCCGATCGCCTATATTGTCCTTTCGCTCCCTCTTGCCGCAG
GTCGAATGGCGACCGCGCAAGGCAACTCCCCCAGTATAGCCTACTTCTGT
GTTGCCGGTGCCATGATCACCAGTTCCGGACTGGTCGACGCCCTGCTGTA
CACCCTGACCCGTCGAAACCTGATCTTGGAATCGGAACCCAGTCACGATC
GCAGCTACAACCGCTTTGCGAGCAGCAAGGGCCGGAAGACCGAAAACCAT
CTGACCACCATCACCGCGGATCCCAAGATGAATCGGACGGATATCAGCGC
TCTGCGCAAGGGCGTCCATGAAGACGACGATCTCGAACATACCGTGCGCG
ACGGTTCCACCGACAACATTGTGCAGACTGCCGGTGTTGAACTGACCCCG
ATGGGCAAGGTGTACCAGCACACCACGATCGAGATCACCTCCGAACCCGC
ATTCGACAATGGAGTCGAAGAGAGCAGCGATCGCTCGAGCAAGGATTCAG
ACCGCCACCATGGGAGAATCAATGACTCGTCAGCACGGATGTGGGGAAGA
TAAATCGCCCACTCAATGTCTTCTTTTCGAAATAATGCCCTTTTCATTTA
TTTTTTTTTTCTATGTGATACTTCTTACGCCTATCTTTGTACTACTATAT
ACGGCTTTATTGTATTCTTTGTGGTGGCGGCTATCTCAGGTTTCCCCCCC
TTATCAATACTCTCACTCCGACGACTTCGACCCCCCCACACCCTCTCTCT
GCGATCTCCGCGGAGAAAGCATCCCTATCTACCTTTCATATTGCATACAT
TATTATGCACATGTATATACCTTACACCGGATATTTCCTTATCTTTCTTC
TTTTCTCAAATACCTTCCAGGAATGATACCATACTTTTTTCTTCTCTTAC
GTTCAACTTGGCAGATAAGATATGATGC
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Coding sequence (CDS) from alignment at ch2:741061..743088-

>KJC3_001808-T1 ID=KJC3_001808-T1|Name=KJC3_001808-T1|organism=Aspergillus niger KJC3|type=CDS|length=2676bp|location=Sequence derived from alignment at ch2:741061..743088- (Aspergillus niger KJC3)
TGCTGGATCAGCGAAGATTACGAATCGATCCGTCTCTGGACGCACTACAT
CTGGATTTTCTTGGCCGAGTTCGGTACGGTCTGTCTGTACGCTGTGATGT
GGTTCCAGCTCCGGGTCCGGATCAAGCAGTCCGCCATTCTGGGCAGCAGT
CACATCGAAAGTCTCAAGCGCCTTCGCCGCGTTATCGGATACATGGTCAT
CTATCCGATCGCCTATATTGTCCTTTCGCTCCCTCTTGCCGCAGGTCGAA
TGGCGACCGCGCAAGGCAACTCCCCCAGTATAGCCTACTTCTGTGTTGCC
GGTGCCATGATCACCAGTTCCGGACTGGTCGACGCCCTGCTGTACACCCT
GACCCGTCGAAACCTGATCTTGGAATCGGAACCCAGTCACGATCGCAGCT
ACAACCGCTTTGCGAGCAGCAAGGGCCGGAAGACCGAAAACCATCTGACC
ACCATCACCGCGGATCCCAAGATGAATCGGACGGATATCAGCGCTCTGCG
CAAGGGCGTCCATGAAGACGACGATCTCGAACATACCGTGCGCGACGGTT
CCACCGACAACATTGTGCAGACTGCCGGTGTTGAACTGACCCCGATGGGC
AAGGTGTACCAGCACACCACGATCGAGATCACCTCCGAACCCGCATTCGA
CAATGGAGTCGAAGAGAGCAGCGATCGCTCGAGCAAGGATTCAGACCGCC
ACCATGGGAGAATCAATGACTCGTCAGCACGGATGTGGGGAAGATAAATG
AGTCTTGTACATGTCCTGAGTGCCCTGGGGGCATTCGATGAAGGGGGGCG
AGACCTCTTCCGCCGAACGATCTATGGCCCCGGTGGCGTCACTCTGGACA
TTGATCCCCTCCCCAGCACTCAGCGCAAAGGTCTCATTGCAGTCTCTGTC
ATGGCAGTTTTATCCTTCGTAGCGACACTGGCCTTGATCTGTTTCATCAG
CTACCGACTCATCTTCTGGCGCGGTTCATATGCGCGGTACATCGGTTACA
ATCAATATGTCATTCTCATCTACAACCTCGTTTTGGCCGATCTCCAGCAA
GCGCTCGCATTCCTGATCTGCATCAAATGGATTGCAGAGGATAAAATATC
CGCGGATTCGGCAGGTTGTTTCCTCCAGGGATTCTGGCTGCAGGTAGGAG
ACCCAGGAAGTGGACTTTTCGTCCTGGCGATCGCCTTTCATACCTTCCTG
CTCGTGGCTCTAGGGCGGAAAATGAGCCATAAAGTCTTCGTCAGCTTCGT
AATTGGAGTTTGGATCTTCGTGGCTGTCCTTGTTATCATCCCCCTTGCTG
CTCATGGCCGTTACGTCTTTATCCCATCAGGTGCCTGGTGCTGGATCAGC
GAAGATTACGAATCGATCCGTCTCTGGACGCACTACATCTGGATTTTCTT
GGCCGAGTTCGGTACGGTCTGTCTGTACGCTGTGATGTGGTTCCAGCTCC
GGGTCCGGATCAAGCAGTCCGCCATTCTGGGCAGCAGTCACATCGAAAGT
CTCAAGCGCCTTCGCCGCGTTATCGGATACATGGTCATCTATCCGATCGC
CTATATTGTCCTTTCGCTCCCTCTTGCCGCAGGTCGAATGGCGACCGCGC
AAGGCAACTCCCCCAGTATAGCCTACTTCTGTGTTGCCGGTGCCATGATC
ACCAGTTCCGGACTGGTCGACGCCCTGCTGTACACCCTGACCCGTCGAAA
CCTGATCTTGGAATCGGAACCCAGTCACGATCGCAGCTACAACCGCTTTG
CGAGCAGCAAGGGCCGGAAGACCGAAAACCATCTGACCACCATCACCGCG
GATCCCAAGATGAATCGGACGGATATCAGCGCTCTGCGCAAGGGCGTCCA
TGAAGACGACGATCTCGAACATACCGTGCGCGACGGTTCCACCGACAACA
TTGTGCAGACTGCCGGTGTTGAACTGACCCCGATGGGCAAGGTGTACCAG
CACACCACGATCGAGATCACCTCCGAACCCGCATTCGACAATGGAGTCGA
AGAGAGCAGCGATCGCTCGAGCAAGGATTCAGACCGCCACCATGGGAGAA
TCAATGACTCGTCAGCACGGATGTGGGGAAGATAAATGAGTCTTGTACAT
GTCCTGAGTGCCCTGGGGGCATTCGATGAAGGGGGGCGAGACCTCTTCCG
CCGAACGATCTATGGCCCCGGTGGCGTCACTCTGGACATTGATCCCCTCC
CCAGCACTCAGCGCAAAGGTCTCATTGCAGTCTCTGTCATGGCAGTTTTA
TCCTTCGTAGCGACACTGGCCTTGATCTGTTTCATCAGCTACCGACTCAT
CTTCTGGCGCGGTTCATATGCGCGGTACATCGGTTACAATCAATATGTCA
TTCTCATCTACAACCTCGTTTTGGCCGATCTCCAGCAAGCGCTCGCATTC
CTGATCTGCATCAAATGGATTGCAGAGGATAAAATATCCGCGGATTCGGC
AGGTTGTTTCCTCCAGGGATTCTGGCTGCAGGTAGGAGACCCAGGAAGTG
GACTTTTCGTCCTGGCGATCGCCTTTCATACCTTCCTGCTCGTGGCTCTA
GGGCGGAAAATGAGCCATAAAGTCTTCGTCAGCTTCGTAATTGGAGTTTG
GATCTTCGTGGCTGTCCTTGTTATCATCCCCCTTGCTGCTCATGGCCGTT
ACGTCTTTATCCCATCAGGTGCCTGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001808KJC3_001808Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001808-T1KJC3_001808-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001808-T1.cdsKJC3_001808-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001808-T1.utr3p1KJC3_001808-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001808-T1.exon2KJC3_001808-T1.exon2Aspergillus niger KJC3exon
KJC3_001808-T1.exon1KJC3_001808-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001808-T1.utr5p1KJC3_001808-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR022596
DBxrefInterPro:IPR023041
DBxrefPFAM:PF11970
DBxrefPFAM:PF11710
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:741061..743088 -
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