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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:754423..755511- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001810-T1 ID=KJC3_001810-T1|Name=KJC3_001810-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1089bp|location=Sequence derived from alignment at ch2:754423..755511- (Aspergillus niger KJC3)
ATGCATTGCGAAGAGAAAAGATATGAACCCTCAAAGAATGTCCCTGATCA
GATACCCGAAGAAACCCGAATTCTCCTTGCTAAGCTGAATCTTTCCTCAG
ACTTTCTTTCCACTGATTCGGACTTGAGTGATGTACCTAGCGGTTTCGAT
GATATTCCATTTGATTACTCTCTCAGTGTCTCACCTATAGAAGCACAGCG
TGCATCAGAGGCTGTAGAGCCAAGCACACCGACTAAAGCAAAATCAACGG
GGGGTGCTCCTGTGCTGCCTAGCCCACCACGTTTGAGGCCTCAGAAGATA
TCACCTTACTTTCCCAAACCTCTGGTCGACCCTGATTCATGTCTTCCGTT
TCCGCCAATCGATGCACCATCATTCGGCTTAGTACAGGAGCAACTTGCCC
ACGATCCTTTCCGTCTATTGATTGCCACCATCTTCTTGAACCGTACCCGT
GGAGGCGTTGCGCTCCCAGTACTATTCAAGGTTTTCGATCGATTCCCAAC
AGTGGAGGCGATGGCATCAACGGACACAAACACCCTGGCGTCTATGATAC
ATTGCCTCGGCTTCCAGAACCAGCGAGCGAAGAAGTGCATTACGCTAGCC
CAGACCTGGCTGGCCTTTCCACCTACGAAAGGAAAGCGCTACCGCAAACT
TCACTACCCCTGCAAGGGAGATGGACGTGATATCGGCCTGGATGAATCCA
TTGCTGATGATGACGCTCGCGTGGGTTGGGAGATTGCTCATCTTCCTGGA
GTCGGGCCCTATTCTTTGGACAGCTGGAGGATATTCTGCCGTGACGAACT
ACGGGGACTTGCCTCGAATTGGAGAGGACATGGGGCTTCCACGGCGCATT
TCAGTCCGGAATGGAAATCAGTGTTGCCGCAAGACAAAGAGCTACGGGCG
TACTTGACGTGGATGTGGTTAAAGGAGGGTTGGGTGTGGGATAGGAACAC
TGGGGAGAGAACACCGGCGAGTGAACGAGTGATGCGAGCAGCACGTCGAG
GAGGGGTGGCTCATGAAGAGGATGGGAATTGGGTCCTTGAGATGTCGCCT
GTGAAGAAGGCGTCGAATGGATTGATAGCATGGAGTTAG back to topCoding sequence (CDS) from alignment at ch2:754423..755511- >KJC3_001810-T1 ID=KJC3_001810-T1|Name=KJC3_001810-T1|organism=Aspergillus niger KJC3|type=CDS|length=1089bp|location=Sequence derived from alignment at ch2:754423..755511- (Aspergillus niger KJC3)
ATGCATTGCGAAGAGAAAAGATATGAACCCTCAAAGAATGTCCCTGATCA
GATACCCGAAGAAACCCGAATTCTCCTTGCTAAGCTGAATCTTTCCTCAG
ACTTTCTTTCCACTGATTCGGACTTGAGTGATGTACCTAGCGGTTTCGAT
GATATTCCATTTGATTACTCTCTCAGTGTCTCACCTATAGAAGCACAGCG
TGCATCAGAGGCTGTAGAGCCAAGCACACCGACTAAAGCAAAATCAACGG
GGGGTGCTCCTGTGCTGCCTAGCCCACCACGTTTGAGGCCTCAGAAGATA
TCACCTTACTTTCCCAAACCTCTGGTCGACCCTGATTCATGTCTTCCGTT
TCCGCCAATCGATGCACCATCATTCGGCTTAGTACAGGAGCAACTTGCCC
ACGATCCTTTCCGTCTATTGATTGCCACCATCTTCTTGAACCGTACCCGT
GGAGGCGTTGCGCTCCCAGTACTATTCAAGGTTTTCGATCGATTCCCAAC
AGTGGAGGCGATGGCATCAACGGACACAAACACCCTGGCGTCTATGATAC
ATTGCCTCGGCTTCCAGAACCAGCGAGCGAAGAAGTGCATTACGCTAGCC
CAGACCTGGCTGGCCTTTCCACCTACGAAAGGAAAGCGCTACCGCAAACT
TCACTACCCCTGCAAGGGAGATGGACGTGATATCGGCCTGGATGAATCCA
TTGCTGATGATGACGCTCGCGTGGGTTGGGAGATTGCTCATCTTCCTGGA
GTCGGGCCCTATTCTTTGGACAGCTGGAGGATATTCTGCCGTGACGAACT
ACGGGGACTTGCCTCGAATTGGAGAGGACATGGGGCTTCCACGGCGCATT
TCAGTCCGGAATGGAAATCAGTGTTGCCGCAAGACAAAGAGCTACGGGCG
TACTTGACGTGGATGTGGTTAAAGGAGGGTTGGGTGTGGGATAGGAACAC
TGGGGAGAGAACACCGGCGAGTGAACGAGTGATGCGAGCAGCACGTCGAG
GAGGGGTGGCTCATGAAGAGGATGGGAATTGGGTCCTTGAGATGTCGCCT
GTGAAGAAGGCGTCGAATGGATTGATAGCATGGAGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0006284 | base-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011257 |
| DBxref | InterPro:IPR003265 |
| DBxref | PFAM:PF00730 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:754423..755511 - |
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