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KJC3_001814-T2, KJC3_001814-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001814-T2
Unique NameKJC3_001814-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:763242..765940+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001814-T2 ID=KJC3_001814-T2|Name=KJC3_001814-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2699bp|location=Sequence derived from alignment at ch2:763242..765940+ (Aspergillus niger KJC3)
GGACCATTCATTTGCAATGCTTTTTGGTCTCCTTCTATCCGCGTGGATGC
CTGTTTCACGATTGACCGAGAAGCCTGTTACTGAACTTGCCGGGTAGGCT
CGAGAATTCTTAATTAACTTCCTCTACAGTCCGAGGCAGCAGCAATTCTT
CATTATCCTCCCCACTCAGGACCCCGAATGGCTCTACGAGGGGAGGAAGA
GAGTCCGGGCTTGACCGTCCGACGCCACCGTATAGGATGTAGTATCTGGC
ACTCACAGTCTTCACTGTATCTGTGATTAACAAACTCCCTCTTTCATCCG
TCCTGCTCGCGCATCGCATGGGGTTCCAATAGACAACTCGTTTGTGATAT
ACTTCAGTCTCCATCGAGTTGGTACCACCTGCTGCTCTACATCTCTAAAG
CATCCCTGCCTGCAAGATGGTCTTTCATCCCTCGTCGCAAAGCATTCTTA
TCATTATTTCTTCTTGGGCATATCCTCATGCTGGACAACTAGTGGGGCTC
GCCAGCTGCGCGGTCTCCCACTACGGGCTACTAGCAGCCAATTCAGTCCG
AGATGCGGCCAGATCCCTGTCAATGCCACGTGACAACGGTGGATGGGGGC
CACGGAGCAGGATGAGCTTTACAGAACACAAATCAGTCAAGATAAAATCT
CAAGCGTTGCATGGTGCCTGTGGTCCTGATTGAATTGACAATCCACAATC
CGCAGCTCTACAAACAAGAATGAATGCGGAGACCCCCTCCCCGAACCAGC
GACTGCGGGTGGGGACTACCAGATCGCGGAGGGGTTGCATTACATGTCGG
TGAGCGAGGAAGCCCTGTGTCCTACCTGCTCCCCCGGCTCAACTCACTTA
CTCCTAATCTTGCGGCTACGGCAGAATTCGTCGCGTCAAATGTGATGAGC
GGAAGCCGGCTTGTTTTCGGTATGCAAACATTGGGAGATCCTGATGCTTC
CGTCGCGAAGAACCCCCACACTGACCACCCGGATAGATGTACCAGTACAG
ACCGGAGATGTGATGGTTATATGCCCATGCCTTATTCCATACGCATCACC
AAACAGCTGGCACAAGTTACTGCATTTGTCAGTCCAGCCGAGTCCCGAGC
CCTCGAGTTCTTCTTTCGCAAGTCTGCAGCGCACCTGGCTGGTTACTTCA
ATGCTTCGTTCTGGACCCGCACGGTTCTACAGCTCAGTCTGACCGAACCC
CCGATTCGCCAAGCGATTGCTGCGATTGGCTTTCTCTATGAAGTAGAGGT
GACGTCCACAACTCCGGGAATGGCACATCACTTGCTGTCTCACCGGTCCG
ACTTGGCGCTACATCTTTACAACCGGGCCATCCGTACCACCATTGATAAG
TTTTCATCAGGAATGGACGTTGTACCCCTAGTCATAGCAGCCAGCATTCT
GTTCGCAGCCCTTGAGTTCCTCCGAGGAAATGCTGCCGTGGCTGCATCAC
ATACCAGAAGCGGGCTTAACCTGGTGCGGTCCTGGCGGGAACATCGAGGG
CGATTCCACCACACGAAGAGTTCTCGGACACATTGGGTAGATGCTGAATT
GGCTCCAATATTGAACTCATTTTCTCTGAATACGTACGAACGATCAGGTC
TCAAACACCTCACAAGTGCGCCACGAGAAAAAGTGCTTGTCAATCCCGTG
GATGCTCAAGGCAAGCTCTTAGTCAATTGGCGGTTCCAAACATTTCATCA
GGCACGCACCGCCCTCCTTGACTTGATGCTTTACCACATCGGGACTTTTC
GCGACTGGCAAGATCTGGCCAGACTGACGGACCTCCCGTACTCGCCCGTT
CTGCGATGGCTCGATACTTTCGAACATGCCGCCCAGCGATGGATGGCAAG
CTTTGAATTGCTAGTGCAACGGAAGCAGTCGGCATGTGGACCAGCCATGG
ATAATGAGATCGATGCTACTCGCACGCTCTGGTATTGCCTCCGTCTAGGA
CTCGGTCGGTACCGTGTGGCCAATGAATGCGGCTGGGATGACTTTCGCGC
TGCCTACGAAGATATCGTCTTGATTGCCGAACGTCTGCTCAATGACTCGG
AACACTACCCGGATGATGTATCGAAAACGATGAGCCTTGACGTACAGTTG
TTGTATCCGTTGCAGGCCGTCGCATGGAAGTGCCGCTGGCCGGACCTTCG
CCGTCGGGCCCTGGATCTGCTACAACGACTTCCGAAGCAAGAGCTGTTCT
TTTATACCCCGAACTACCACACCGTCTGCAGCCGGATCATGGAACTTGAG
GAGAGTATGATGGGCAATGACATGCTTCCCCCAGATCACTCCCGAATCTA
TAGTTTCACCATCACCCCTACCCCCGCCACGACGGCGGACCACCCTATTT
ACTCCGTCACTTTTACTACGTTCCCACATGGCCGAAGTAGCGAGCCACAC
TTTCACACCGAATCGCTATGGCTTCATCCATCGCAGGCGGGGGTCGCCGC
AACCATTCCACCTGTTGATATGATGCAACGTCGCGACTGGTCACCGGTCG
CTCAGACAAATGCTCACACTCAGCTGTCCTCAATACCTGCAACATGGATA
ATGTAGATAACACAGGCGCCTGACGATAGCCCTCAAACAGAATTTCTAGC
CACATAGATGGTTAACTTTAGCAGCCAAGCAGAATATATGTTCAACCATT
CCACATGGATCGTTACATCGAACAAGTCGATACGTATAGTACTTTCACG
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Coding sequence (CDS) from alignment at ch2:763242..765940+

>KJC3_001814-T2 ID=KJC3_001814-T2|Name=KJC3_001814-T2|organism=Aspergillus niger KJC3|type=CDS|length=1536bp|location=Sequence derived from alignment at ch2:763242..765940+ (Aspergillus niger KJC3)
ATGCCCATGCCTTATTCCATACGCATCACCAAACAGCTGGCACAAGTTAC
TGCATTTGTCAGTCCAGCCGAGTCCCGAGCCCTCGAGTTCTTCTTTCGCA
AGTCTGCAGCGCACCTGGCTGGTTACTTCAATGCTTCGTTCTGGACCCGC
ACGGTTCTACAGCTCAGTCTGACCGAACCCCCGATTCGCCAAGCGATTGC
TGCGATTGGCTTTCTCTATGAAGTAGAGGTGACGTCCACAACTCCGGGAA
TGGCACATCACTTGCTGTCTCACCGGTCCGACTTGGCGCTACATCTTTAC
AACCGGGCCATCCGTACCACCATTGATAAGTTTTCATCAGGAATGGACGT
TGTACCCCTAGTCATAGCAGCCAGCATTCTGTTCGCAGCCCTTGAGTTCC
TCCGAGGAAATGCTGCCGTGGCTGCATCACATACCAGAAGCGGGCTTAAC
CTGGTGCGGTCCTGGCGGGAACATCGAGGGCGATTCCACCACACGAAGAG
TTCTCGGACACATTGGGTAGATGCTGAATTGGCTCCAATATTGAACTCAT
TTTCTCTGAATACGTACGAACGATCAGGTCTCAAACACCTCACAAGTGCG
CCACGAGAAAAAGTGCTTGTCAATCCCGTGGATGCTCAAGGCAAGCTCTT
AGTCAATTGGCGGTTCCAAACATTTCATCAGGCACGCACCGCCCTCCTTG
ACTTGATGCTTTACCACATCGGGACTTTTCGCGACTGGCAAGATCTGGCC
AGACTGACGGACCTCCCGTACTCGCCCGTTCTGCGATGGCTCGATACTTT
CGAACATGCCGCCCAGCGATGGATGGCAAGCTTTGAATTGCTAGTGCAAC
GGAAGCAGTCGGCATGTGGACCAGCCATGGATAATGAGATCGATGCTACT
CGCACGCTCTGGTATTGCCTCCGTCTAGGACTCGGTCGGTACCGTGTGGC
CAATGAATGCGGCTGGGATGACTTTCGCGCTGCCTACGAAGATATCGTCT
TGATTGCCGAACGTCTGCTCAATGACTCGGAACACTACCCGGATGATGTA
TCGAAAACGATGAGCCTTGACGTACAGTTGTTGTATCCGTTGCAGGCCGT
CGCATGGAAGTGCCGCTGGCCGGACCTTCGCCGTCGGGCCCTGGATCTGC
TACAACGACTTCCGAAGCAAGAGCTGTTCTTTTATACCCCGAACTACCAC
ACCGTCTGCAGCCGGATCATGGAACTTGAGGAGAGTATGATGGGCAATGA
CATGCTTCCCCCAGATCACTCCCGAATCTATAGTTTCACCATCACCCCTA
CCCCCGCCACGACGGCGGACCACCCTATTTACTCCGTCACTTTTACTACG
TTCCCACATGGCCGAAGTAGCGAGCCACACTTTCACACCGAATCGCTATG
GCTTCATCCATCGCAGGCGGGGGTCGCCGCAACCATTCCACCTGTTGATA
TGATGCAACGTCGCGACTGGTCACCGGTCGCTCAGACAAATGCTCACACT
CAGCTGTCCTCAATACCTGCAACATGGATAATGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001814KJC3_001814Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001814-T2KJC3_001814-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001814-T2.utr5p1KJC3_001814-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_001814-T2.utr5p2KJC3_001814-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001814-T2.exon1KJC3_001814-T2.exon1Aspergillus niger KJC3exon
KJC3_001814-T2.exon2KJC3_001814-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001814-T2.cdsKJC3_001814-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001814-T2.utr3p1KJC3_001814-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:763242..765940 +
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