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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:780648..782513- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001819-T1 ID=KJC3_001819-T1|Name=KJC3_001819-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1866bp|location=Sequence derived from alignment at ch2:780648..782513- (Aspergillus niger KJC3)
ATGGTTTCCTTCTCATGCGAGGTGAGTTGTCCTTATCTCTCGTTTGTCAC
GAGCTGCTACCTGCGCGGGACTCTATTGGAAATCATGCTAACTCGCTGCC
TCTTCTTAATCTCTAGGCTTGCGGTGATGTCCTCACCAAGAAGAAGCTTG
ATCCCCATCGCAACCAATGTCGCGGCGCCTCCTTCACCTGCATCGACTGC
ATGGTACACTTTTACGGAACTGAGTATCGGTCGCATACGGTATGGAACTT
CTACCCCTCCGCTTATTCTTTCGCCGCGAACTATATACTTTGCGCTTCGT
CCATCGGGTCGGAACTCTCTGCGCTATGTCTGATTTTTTGATTGGTGGAT
ATCAGCGCTCGGGCTTTTGTTGGGAGAGTGCAGGCGCATCTCGTGAACAA
GAATCGTGTGACTGACCTGTTTTCTACAGTCGTGTATGAGCGAGGCGCAA
AAGTACCAGGGCGCACTCTACAGGGAGAAGCCTTCGAAGAACCAACGCAA
GGCGCAACAGAACAATGGCAAGCAGAATCAGAAGCAAAACAACGCTCATG
GTCACCGCGCCCCCTATGTCGAAGATGCGAATGACACCGACAACCCGCCT
GCGGCTCCTACTCCCCCAATGGCTGAAAACGACAAGTCCCAGGGAGCCTC
TACGCAGAACGGAGACAAGCAAGTCAATGTCTTTGACTACTTGGTGACAG
AAAAGACCCCCAACGCGTCCAAGGTCTCTTTGGGCGGATCTAAAGAGCAG
ATGAAGATGGTCGCCAATGCTCCCTCCGTCTTCGAGCCCAGCAAATCTCT
GACTCGCGCCGACACCGATGCGGAGGAGGAGAACAAGAACTACGATGTCG
CCTACGAGGAGAATGGTTACTCCTACGGAGCTGGACCCATCAACCAGTCC
GTGTACGACGGCAAAGCTCCGAACGCCTCCATGGAGTTCATGACTCCGGC
ACCAAAGAAAAAGAAGGATCGTTTGCGCGGCGAGGACAAAGTTAACGGCA
CGACCAGTGAGAAGAAGCGCAAGCGCCGCACCGATGATCACGACATGGAT
GAAGCCGACACACCCATGTTGGATGCGCCGTCCAGCGTTTTGAACAACCC
GGGCACACCCATGCTGAAGCACTCAGGTCTGACCGGTGGCCTGGATCGGA
TGCTCCGCTCGCCGTCTCAGGACGGAGAAGATCACCCTCGTCGGCGTTAT
CAGGATCCCTCGTCACCCATTAAGCGTTCTCGTCGGGACGACAAGGACAG
CAACGGTGATGGGCTTGGGATTTCGATCAAGAACCGCGCTGAACGTCTTG
TGTCGTCGATGTTTGGCGGATCGTCGGTCTCAGGAAGCAGCGTGAACAGC
CGCGAAACCTCCGGCAAGGCTACCCGGGCCAGCCGACGGGGGTCTCCAGA
CGAGGGTCGTTCCAAGAAGTTGCCCAAGGTTCGCAACGCCTCGAACGGCC
AGGCCGAGTCTGATGTTAGCAAGAGCAAGCGTAAGAGCAGCGCTCAGACG
GACGGTGATCGGCCCTCGCGCCGTCAGAAGCAGATCGAGCACACCGACTC
TCGCCATAACGACGACGGCCGTGAAGTGGTGGTTTACCAGCAAAGCAGCG
TCCCCGATGGCTTGCAGCGCCAGATGGCCACTCACTTCCTCTCATTGGTG
ACCAAGGGACCCGAAAGCACGCGTGGGTTCTCTGTGAACAAGGTTTTGAA
GCGATTCCACCGCGATTTCACGGATGAATTCGACGACAGCGACCGTGGAC
GGGATCAAGGCCGCAGCCGTGCAGATCGGGAGCGCAGAGCCGATGACGAG
AAAGAGCTGTGGCGGACTCTGCGCTTGAAGCAGAACGAACGGGGTGAAGT
GGTGCTTTTCTTCTGA back to topCoding sequence (CDS) from alignment at ch2:780648..782513- >KJC3_001819-T1 ID=KJC3_001819-T1|Name=KJC3_001819-T1|organism=Aspergillus niger KJC3|type=CDS|length=4743bp|location=Sequence derived from alignment at ch2:780648..782513- (Aspergillus niger KJC3)
TCGTGTATGAGCGAGGCGCAAAAGTACCAGGGCGCACTCTACAGGGAGAA
GCCTTCGAAGAACCAACGCAAGGCGCAACAGAACAATGGCAAGCAGAATC
AGAAGCAAAACAACGCTCATGGTCACCGCGCCCCCTATGTCGAAGATGCG
AATGACACCGACAACCCGCCTGCGGCTCCTACTCCCCCAATGGCTGAAAA
CGACAAGTCCCAGGGAGCCTCTACGCAGAACGGAGACAAGCAAGTCAATG
TCTTTGACTACTTGGTGACAGAAAAGACCCCCAACGCGTCCAAGGTCTCT
TTGGGCGGATCTAAAGAGCAGATGAAGATGGTCGCCAATGCTCCCTCCGT
CTTCGAGCCCAGCAAATCTCTGACTCGCGCCGACACCGATGCGGAGGAGG
AGAACAAGAACTACGATGTCGCCTACGAGGAGAATGGTTACTCCTACGGA
GCTGGACCCATCAACCAGTCCGTGTACGACGGCAAAGCTCCGAACGCCTC
CATGGAGTTCATGACTCCGGCACCAAAGAAAAAGAAGGATCGTTTGCGCG
GCGAGGACAAAGTTAACGGCACGACCAGTGAGAAGAAGCGCAAGCGCCGC
ACCGATGATCACGACATGGATGAAGCCGACACACCCATGTTGGATGCGCC
GTCCAGCGTTTTGAACAACCCGGGCACACCCATGCTGAAGCACTCAGGTC
TGACCGGTGGCCTGGATCGGATGCTCCGCTCGCCGTCTCAGGACGGAGAA
GATCACCCTCGTCGGCGTTATCAGGATCCCTCGTCACCCATTAAGCGTTC
TCGTCGGGACGACAAGGACAGCAACGGTGATGGGCTTGGGATTTCGATCA
AGAACCGCGCTGAACGTCTTGTGTCGTCGATGTTTGGCGGATCGTCGGTC
TCAGGAAGCAGCGTGAACAGCCGCGAAACCTCCGGCAAGGCTACCCGGGC
CAGCCGACGGGGGTCTCCAGACGAGGGTCGTTCCAAGAAGTTGCCCAAGG
TTCGCAACGCCTCGAACGGCCAGGCCGAGTCTGATGTTAGCAAGAGCAAG
CGTAAGAGCAGCGCTCAGACGGACGGTGATCGGCCCTCGCGCCGTCAGAA
GCAGATCGAGCACACCGACTCTCGCCATAACGACGACGGCCGTGAAGTGG
TGGTTTACCAGCAAAGCAGCGTCCCCGATGGCTTGCAGCGCCAGATGGCC
ACTCACTTCCTCTCATTGGTGACCAAGGGACCCGAAAGCACGCGTGGGTT
CTCTGTGAACAAGGTTTTGAAGCGATTCCACCGCGATTTCACGGATGAAT
TCGACGACAGCGACCGTGGACGGGATCAAGGCCGCAGCCGTGCAGATCGG
GAGCGCAGAGCCGATGACGAGAAAGAGCTGTGGCGGACTCTGCGCTTGAA
GCAGAACGAACGGGGTGAAGTGGTGCTTTTCTTCTGAGCTTGCGGTGATG
TCCTCACCAAGAAGAAGCTTGATCCCCATCGCAACCAATGTCGCGGCGCC
TCCTTCACCTGCATCGACTGCATGGTACACTTTTACGGAACTGAGTATCG
GTCGCATACGATGGTTTCCTTCTCATGCGAGTCGTGTATGAGCGAGGCGC
AAAAGTACCAGGGCGCACTCTACAGGGAGAAGCCTTCGAAGAACCAACGC
AAGGCGCAACAGAACAATGGCAAGCAGAATCAGAAGCAAAACAACGCTCA
TGGTCACCGCGCCCCCTATGTCGAAGATGCGAATGACACCGACAACCCGC
CTGCGGCTCCTACTCCCCCAATGGCTGAAAACGACAAGTCCCAGGGAGCC
TCTACGCAGAACGGAGACAAGCAAGTCAATGTCTTTGACTACTTGGTGAC
AGAAAAGACCCCCAACGCGTCCAAGGTCTCTTTGGGCGGATCTAAAGAGC
AGATGAAGATGGTCGCCAATGCTCCCTCCGTCTTCGAGCCCAGCAAATCT
CTGACTCGCGCCGACACCGATGCGGAGGAGGAGAACAAGAACTACGATGT
CGCCTACGAGGAGAATGGTTACTCCTACGGAGCTGGACCCATCAACCAGT
CCGTGTACGACGGCAAAGCTCCGAACGCCTCCATGGAGTTCATGACTCCG
GCACCAAAGAAAAAGAAGGATCGTTTGCGCGGCGAGGACAAAGTTAACGG
CACGACCAGTGAGAAGAAGCGCAAGCGCCGCACCGATGATCACGACATGG
ATGAAGCCGACACACCCATGTTGGATGCGCCGTCCAGCGTTTTGAACAAC
CCGGGCACACCCATGCTGAAGCACTCAGGTCTGACCGGTGGCCTGGATCG
GATGCTCCGCTCGCCGTCTCAGGACGGAGAAGATCACCCTCGTCGGCGTT
ATCAGGATCCCTCGTCACCCATTAAGCGTTCTCGTCGGGACGACAAGGAC
AGCAACGGTGATGGGCTTGGGATTTCGATCAAGAACCGCGCTGAACGTCT
TGTGTCGTCGATGTTTGGCGGATCGTCGGTCTCAGGAAGCAGCGTGAACA
GCCGCGAAACCTCCGGCAAGGCTACCCGGGCCAGCCGACGGGGGTCTCCA
GACGAGGGTCGTTCCAAGAAGTTGCCCAAGGTTCGCAACGCCTCGAACGG
CCAGGCCGAGTCTGATGTTAGCAAGAGCAAGCGTAAGAGCAGCGCTCAGA
CGGACGGTGATCGGCCCTCGCGCCGTCAGAAGCAGATCGAGCACACCGAC
TCTCGCCATAACGACGACGGCCGTGAAGTGGTGGTTTACCAGCAAAGCAG
CGTCCCCGATGGCTTGCAGCGCCAGATGGCCACTCACTTCCTCTCATTGG
TGACCAAGGGACCCGAAAGCACGCGTGGGTTCTCTGTGAACAAGGTTTTG
AAGCGATTCCACCGCGATTTCACGGATGAATTCGACGACAGCGACCGTGG
ACGGGATCAAGGCCGCAGCCGTGCAGATCGGGAGCGCAGAGCCGATGACG
AGAAAGAGCTGTGGCGGACTCTGCGCTTGAAGCAGAACGAACGGGGTGAA
GTGGTGCTTTTCTTCTGAGCTTGCGGTGATGTCCTCACCAAGAAGAAGCT
TGATCCCCATCGCAACCAATGTCGCGGCGCCTCCTTCACCTGCATCGACT
GCATGGTACACTTTTACGGAACTGAGTATCGGTCGCATACGATGGTTTCC
TTCTCATGCGAGTCGTGTATGAGCGAGGCGCAAAAGTACCAGGGCGCACT
CTACAGGGAGAAGCCTTCGAAGAACCAACGCAAGGCGCAACAGAACAATG
GCAAGCAGAATCAGAAGCAAAACAACGCTCATGGTCACCGCGCCCCCTAT
GTCGAAGATGCGAATGACACCGACAACCCGCCTGCGGCTCCTACTCCCCC
AATGGCTGAAAACGACAAGTCCCAGGGAGCCTCTACGCAGAACGGAGACA
AGCAAGTCAATGTCTTTGACTACTTGGTGACAGAAAAGACCCCCAACGCG
TCCAAGGTCTCTTTGGGCGGATCTAAAGAGCAGATGAAGATGGTCGCCAA
TGCTCCCTCCGTCTTCGAGCCCAGCAAATCTCTGACTCGCGCCGACACCG
ATGCGGAGGAGGAGAACAAGAACTACGATGTCGCCTACGAGGAGAATGGT
TACTCCTACGGAGCTGGACCCATCAACCAGTCCGTGTACGACGGCAAAGC
TCCGAACGCCTCCATGGAGTTCATGACTCCGGCACCAAAGAAAAAGAAGG
ATCGTTTGCGCGGCGAGGACAAAGTTAACGGCACGACCAGTGAGAAGAAG
CGCAAGCGCCGCACCGATGATCACGACATGGATGAAGCCGACACACCCAT
GTTGGATGCGCCGTCCAGCGTTTTGAACAACCCGGGCACACCCATGCTGA
AGCACTCAGGTCTGACCGGTGGCCTGGATCGGATGCTCCGCTCGCCGTCT
CAGGACGGAGAAGATCACCCTCGTCGGCGTTATCAGGATCCCTCGTCACC
CATTAAGCGTTCTCGTCGGGACGACAAGGACAGCAACGGTGATGGGCTTG
GGATTTCGATCAAGAACCGCGCTGAACGTCTTGTGTCGTCGATGTTTGGC
GGATCGTCGGTCTCAGGAAGCAGCGTGAACAGCCGCGAAACCTCCGGCAA
GGCTACCCGGGCCAGCCGACGGGGGTCTCCAGACGAGGGTCGTTCCAAGA
AGTTGCCCAAGGTTCGCAACGCCTCGAACGGCCAGGCCGAGTCTGATGTT
AGCAAGAGCAAGCGTAAGAGCAGCGCTCAGACGGACGGTGATCGGCCCTC
GCGCCGTCAGAAGCAGATCGAGCACACCGACTCTCGCCATAACGACGACG
GCCGTGAAGTGGTGGTTTACCAGCAAAGCAGCGTCCCCGATGGCTTGCAG
CGCCAGATGGCCACTCACTTCCTCTCATTGGTGACCAAGGGACCCGAAAG
CACGCGTGGGTTCTCTGTGAACAAGGTTTTGAAGCGATTCCACCGCGATT
TCACGGATGAATTCGACGACAGCGACCGTGGACGGGATCAAGGCCGCAGC
CGTGCAGATCGGGAGCGCAGAGCCGATGACGAGAAAGAGCTGTGGCGGAC
TCTGCGCTTGAAGCAGAACGAACGGGGTGAAGTGGTGCTTTTCTTCTGAG
CTTGCGGTGATGTCCTCACCAAGAAGAAGCTTGATCCCCATCGCAACCAA
TGTCGCGGCGCCTCCTTCACCTGCATCGACTGCATGGTACACTTTTACGG
AACTGAGTATCGGTCGCATACGATGGTTTCCTTCTCATGCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR014898 |
| DBxref | PFAM:PF08790 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:780648..782513 - |
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