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KJC3_001823-T2, KJC3_001823-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001823-T2
Unique NameKJC3_001823-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:787891..789285+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001823-T2 ID=KJC3_001823-T2|Name=KJC3_001823-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1395bp|location=Sequence derived from alignment at ch2:787891..789285+ (Aspergillus niger KJC3)
GCCTGGAGAGCTCCGTCAGAGCTCATAACCACCTCTCTAGCCATCAGTCA
CACTGCACTTAACGTTTGCTTCCCATCAGCTCTTCATTACCATCATACCC
TCTTTCTCTCGGTGGAGTAGCTTTACATAGACAGGAACTATCCATCTTTT
CTGTCAATTTTCAATCAGTCATCATGGTCGGTCACGGTATGACGGGGATG
CTCGGCGAGGGTTAGTGGTCTCGTGCTGTGAGTTCATGATGTGTCGGAGC
AGGAGCTAATTAGTTATTGCAGATGGCATTCATGTTGACATGAACCACTT
GAAGAGCGGAGAAGTAAAGTATGTCCTGACTTACTCAATGAGACTTGCAT
GAACGGTCACTAACTCATCTGTACAGCCTAGGAACGTCGATGTGAGTTTC
AGTCAGCCTCCGATGCAACAACTATTCCATATGTTGACGAAATACAGCAT
GGCTATCAACTTCAAGGATGGTGTTATATTGGGTGCCGACAGTCGGACGA
CAACCGGAGCTTACATCGCCAATCGAGTCACCGACAAGTTGACGCAGGTC
CATGACACAATCTGGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGGC
TGTGGCAGATATTGTGTCCTATCACCTCAACATGTACTCGATCACCAACA
ACGAGGCGCCGAGTACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATGT
TACGAGAACAAGGACATGCTAAGGTAGGCACACAACCGGATCAGCCTGGA
CCGAGCAATCTTTGTTGACCAATCAATCACAGTGCCGGTATCATCATCGC
CGGATACGACCCGAAGCACGGAGGTCAGGTGTATTCGATACCGTTGGGCG
GGTCTCTTCACAAGCAACCGTTCTCTATCGGCGGATCTGGATCAACCTAT
ATCTATGGCTACTGTGATGCTCACTGGAGGGAGAACATGACAGAGGAGGA
AGGCATCAACTTCGTCCGCGGAGCACTGCAAGAAGCAATCAAGTGGGATG
GCAGTTCCGGTGGTGTAATCCGACTGGTGGTGCTGACGTCTCGGGGCGCC
CAGCGACACCTCTACCTGCCAGACACGGGCTACACCGGCCCGGGCGTTAC
CAATTAACGAATGTATCTATACGGGACGATGATTTTAATTGTTGTTAGCT
GCTAAACGAGCTATTTCATGTTTGGTTCTACCAGAGTAGTGCTTCCTTCT
TATATTTCAAAAGCGCCTTTGCCATATCCAGACGAAGGATCTTCCCAGAT
CTGAGACTGCTTGGTACCTAATCAAGTTGGGATGCATCTTTCTTCACCGA
GTGGGATATTGGGGGGTGGGTAATGTGATAGCGTGGTGATTGATAGCGCT
GTTCAGGAGTTACTCCCCGTCATCTTATAGTTTGCTTGCCTTGAG
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Coding sequence (CDS) from alignment at ch2:787891..789285+

>KJC3_001823-T2 ID=KJC3_001823-T2|Name=KJC3_001823-T2|organism=Aspergillus niger KJC3|type=CDS|length=2580bp|location=Sequence derived from alignment at ch2:787891..789285+ (Aspergillus niger KJC3)
ATGAACCACTTGAAGAGCGGAGAAGTAAACCTAGGAACGTCGATCATGGC
TATCAACTTCAAGGATGGTGTTATATTGGGTGCCGACAGTCGGACGACAA
CCGGAGCTTACATCGCCAATCGAGTCACCGACAAGTTGACGCAGGTCCAT
GACACAATCTGGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGGCTGT
GGCAGATATTGTGTCCTATCACCTCAACATGTACTCGATCACCAACAACG
AGGCGCCGAGTACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATGTTAC
GAGAACAAGGACATGCTAAGTGCCGGTATCATCATCGCCGGATACGACCC
GAAGCACGGAGGTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTCACA
AGCAACCGTTCTCTATCGGCGGATCTGGATCAACCTATATCTATGGCTAC
TGTGATGCTCACTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAACTT
CGTCCGCGGAGCACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCGGTG
GTGTAATCCGACTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACACCTC
TACCTGCCAGACACGGGCTACACCGGCCCGGGCGTTACCAATTAAATGAA
CCACTTGAAGAGCGGAGAAGTAAACCTAGGAACGTCGATCATGGCTATCA
ACTTCAAGGATGGTGTTATATTGGGTGCCGACAGTCGGACGACAACCGGA
GCTTACATCGCCAATCGAGTCACCGACAAGTTGACGCAGGTCCATGACAC
AATCTGGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGGCTGTGGCAG
ATATTGTGTCCTATCACCTCAACATGTACTCGATCACCAACAACGAGGCG
CCGAGTACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATGTTACGAGAA
CAAGGACATGCTAAGTGCCGGTATCATCATCGCCGGATACGACCCGAAGC
ACGGAGGTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTCACAAGCAA
CCGTTCTCTATCGGCGGATCTGGATCAACCTATATCTATGGCTACTGTGA
TGCTCACTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAACTTCGTCC
GCGGAGCACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCGGTGGTGTA
ATCCGACTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACACCTCTACCT
GCCAGACACGGGCTACACCGGCCCGGGCGTTACCAATTAAATGAACCACT
TGAAGAGCGGAGAAGTAAACCTAGGAACGTCGATCATGGCTATCAACTTC
AAGGATGGTGTTATATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTA
CATCGCCAATCGAGTCACCGACAAGTTGACGCAGGTCCATGACACAATCT
GGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATT
GTGTCCTATCACCTCAACATGTACTCGATCACCAACAACGAGGCGCCGAG
TACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGG
ACATGCTAAGTGCCGGTATCATCATCGCCGGATACGACCCGAAGCACGGA
GGTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTT
CTCTATCGGCGGATCTGGATCAACCTATATCTATGGCTACTGTGATGCTC
ACTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGA
GCACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCG
ACTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAG
ACACGGGCTACACCGGCCCGGGCGTTACCAATTAAATGAACCACTTGAAG
AGCGGAGAAGTAAACCTAGGAACGTCGATCATGGCTATCAACTTCAAGGA
TGGTGTTATATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTACATCG
CCAATCGAGTCACCGACAAGTTGACGCAGGTCCATGACACAATCTGGTGC
TGTCGATCAGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATTGTGTC
CTATCACCTCAACATGTACTCGATCACCAACAACGAGGCGCCGAGTACTC
AGGTCGCCGCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGGACATG
CTAAGTGCCGGTATCATCATCGCCGGATACGACCCGAAGCACGGAGGTCA
GGTGTATTCGATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTTCTCTA
TCGGCGGATCTGGATCAACCTATATCTATGGCTACTGTGATGCTCACTGG
AGGGAGAACATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGAGCACT
GCAAGAAGCAATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCGACTGG
TGGTGCTGACGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAGACACG
GGCTACACCGGCCCGGGCGTTACCAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRE3_1KJC3_001823Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001823-T2KJC3_001823-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001823-T2.utr5p1KJC3_001823-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001823-T2.exon1KJC3_001823-T2.exon1Aspergillus niger KJC3exon
KJC3_001823-T2.exon2KJC3_001823-T2.exon2Aspergillus niger KJC3exon
KJC3_001823-T2.exon3KJC3_001823-T2.exon3Aspergillus niger KJC3exon
KJC3_001823-T2.exon4KJC3_001823-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001823-T2.cdsKJC3_001823-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001823-T2.utr3p1KJC3_001823-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0001645
DBxrefInterPro:IPR023333
DBxrefInterPro:IPR016050
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR000243
DBxrefPFAM:PF00227
Product variant 2
ProductProteasome subunit beta type-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:787891..789285 +
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