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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:819148..822647+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001832-T1 ID=KJC3_001832-T1|Name=KJC3_001832-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3500bp|location=Sequence derived from alignment at ch2:819148..822647+ (Aspergillus niger KJC3)
GCTTCACTCAGCCCGGCTCACTAAGGACGGAGTAAGTACTCTTGCTGGTC
TGATTGCATCCATCCTTTAGTTAGTAGTTAGTATCCCCATCCTAATCTTA
TCCCCATCTCCATCCCATCCCATCCCATCCCATCCCATCCCATCCCATCC
CCCTTCTCCTCCTACTCCCTCTTCTTCTTTCATTCATCATCCACCACCAC
CTTCTTTTCCCATTCAGTTTCTTCCTCCCCCCCAAATTCTCACTCGCTCT
GCTTTCCTCTCTCTCACCCTGGCACTTTCGTTTCTTTTCTTTATTTTCTT
ATATTATTTACCCTACATCCCAATCCTAGTCTTTCGCTTTGAGTCTAGTC
TAGTCCATCGTTTCCCATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCACCTCTGCTGCTGTCTCATCTGCCTCTTGTCTCGGTTTTTGTCGGGGA
TCGTTTCATCTCCCCGTCCCCTTCCCCCTTCGGCTCCGGCCCCCAAATGC
ACTGCTTGCTGCACGATTAACTCCTGAATCCCTTGAGTGCATAGTAAGAG
GAGGACCAGAATAATACCAAAATTGAAACAAGAAAAACAGCCTCGCCCCC
CTCGACCCTTTCTTAAACCGCCGCCACTTGTTCTGCCGCTTCCAGTACAT
GCGGCAACCTGCTTGGGGTTCTTCCGTCACACACCTATTAATTAATACCA
TCCGGAGATCATCCCACCTCTTTACCACCCCCCGTCTTTCGTTCCTGATA
ACGGCTTTATTTTCTTTGTTCTCAATTCGCGCCACCATCGGACGTGTTTG
TATCATCATTCTTTTCGTTCCTGGTTCTCGCAGCGGCTTGAGGTTCATCC
GCCCTTGAGGTTCTTCCCTTACTCTGATCTGGGAAGAGTCTCGAACTCTG
CAGCTTCTCCCGCCGCAATGACAACCGTTTGTACGACCACCCCGAATTCC
CCTCCTGACCTCTCCGGGTCCAAGTCCTCCAAGTCTTCCTCCTTTCGTTC
CTCCTCGCAGCACTCGGGCCCCGAAGCCATCTTCACTGATATCTCCAATT
TCGAAGAAGTGGACCTCCAGGACGATGTGCATGTCTCCTACGCCAAAGGT
GCAACCCCGTACGTCCAAAATGCTGGAATCGCCCGAGCTTCAGCGGCCAT
TATGCACACCAAATCGGCGGTTGCGACAACCCGCGATCTGACAGCCACGA
AAACAAAGACCGCATACCCTGCCGGAAAACAGGTCAATGGCACCTTGGCT
CAGCCGGGCCGCGGTCCCAAACACCGCACCGGCAATCAGCGGGATCCAGC
CTCCACCAAGCAATCAGCCCTTCAAGTCACGAAGCCTCATCGTTCGCGTT
CCACATCCCCACTGCGACCAACATCGAGCTTGAGCTCGTCGCCGTCTACA
CACAGCCTGTCCCTGAATTCCGTCAATACCCCCACCCTCAACCGAAAGCC
ATCGTGGCAGCGACCTCGCAAAACCGTGCAAGACTTGGAGGATGAATACC
ATGACTCCGATGAAGAGTTACCCGAGGATGCGAGTCTCTGGAATGTTCCC
ATCTCCCCGCGGCCGGTACAGGATCGAGCGCCGTCCCGGGCCTCCAGCCC
CAACGGTCGCAGTCCTGGCCCTCGACCCCTGCCGCTGTCGCATTCGGTTT
CCGATGTCACCATTCCCCGGTCGCCTTCCGGTTCACGATCCCCCACGACC
CGCAACAATCGTTCCAGCTCTGCAGGACCTGAGCGCGGTCAGATCTCGCC
CCGCAACCCGCGAGCATACTCGTACAACAATATGATGTCGGATTTGTCGG
AAGAGGCCAAGATCATTACGGAAGCCTTGGAATTCCACGCCGATGAGCGC
CAGCGCCAGCGGGGAGAGCGCCTGCAAAGCGGGCTCTCCTCTCTCCGGTC
GAGCGAGGAGTCCAAGCGTGGGTCCAAAAGCACCATTGAGCTGCCCCCGT
TGCAGAAATCCAACATCATGATCGATCCGTTACCTCCCAGCAAGGAGAAG
GAGAAGGTCCTGACGCGGACGCGGCCCAGCTGGCTGCCTCCGAAGGATCA
GAAGGAGGAGAAGCGGCATTTGAAGGAATACAAGCGGATGATGGCGCAGG
CCCGGGAAGCAGGTATGTGACTCGACTCATTGCAATGATCGGTAACTGAC
AATGATCAGACAAGCGTCGTGCTGCGAAGGCTGCTTCCGCGAAATGCGAA
AAGGACAACACTCGCGAGACTCTCCAGCAGATCTGGGACGAGTATGTGTA
CCCGAACTGGGATAATGTCATTAATGAAACCCGTACGCGGGAGTTATGGT
GGCGCGGAGTGCCGCCTCGGATCCGGGGCTCGACCTGGCAGCGTGCTATC
GGCAATGAGCTGGCTCTCTCCGAGGAAACATACAAAAAGGCCTTGCAACG
CGCCAAGGACGTGCGGGCGCGGCCCGAGGGTGATTCAGGGGAGACCAACA
AGCGCATGAGGGATTGGTTCGAGGCGATCGACGCTGATGCGTCCAAGGCA
TTCCCCGATTTGAACTTGTTTCAGGTCGGCGGTCCGCTGCGCGAGACATT
GATCGATGTTTTGCAGGCCTACTCTATGTATCGCAGCGACGTGGGCTATG
TCAGTGGCTTGCATGTGAGTTTTCCTTTCGTACTCCTCGACGATTCATGA
CTAACGATTCTAGACCATCGCTGCCCTGCTTGTCTTGCAATTTCCATCGC
CATCGTCGGCGTTCCTTGCCATGGCCAATGCGCTCAATCGGCCGCTCCCT
GTTGCTTTTCTTACGTTGGACCGCGGGGCGATCGGTCGTACATATTCACT
GGCGTCTGCGACGCTGAAATACAAATTCCCGCGTTTGATGACGCATTTGC
ACGAGACGCTCCGACTCAGCGACGAAGAGATCTGGGAACCGATGTTCCGG
TCTCTGCTGACGAACGGACTGGACTTGGAGCGTCTCAGCCGGGTCTGGGA
CTGCTGGGTATTCGAAGGTGACCGGATCATGATCCGGGCGGGCGTCGCGA
TCCTCGGTTGCTTGCAGCCACAGCTGTTTGGGTACACCAAGCCGGACGAC
CAGAGTCGCAAGGCGGTGCAGGATATTCTCAGCTGGGGACCCCGACAGGG
GGGCACTCGGACGCAGGAGCGACACAGTGCCCCGGCCTCCGCGACTGGGT
TCGGAGGCGGGCAGATGGCGTCCGGGATGGGCGATTACTGGATGTTGGGC
TCGGCGGGTGACGAGGATGGCTTTATGCATGAAGTGCGCGAGGCGGGCAA
GGTGCGATGATTGATGATGATACCTCGCAGCCACTATTTAGATAATCATT
TCTTCTTCTTCGATGAACATATTACTATGGCAGGGTAATTCGCTGGTCGG
TGATTTTGGATGGACTGGGATTCTGTCGTTGCATGGTGTATGATATTGGC
AGTATTCGATAGACAGCTATACCCTATAGCTACTAACTATATTTCAGCCT
ACAGCTTTACAGCTTACCTGGAATGTTATGCACTGCCTGCAGACAGACAG
back to topCoding sequence (CDS) from alignment at ch2:819148..822647+ >KJC3_001832-T1 ID=KJC3_001832-T1|Name=KJC3_001832-T1|organism=Aspergillus niger KJC3|type=CDS|length=6039bp|location=Sequence derived from alignment at ch2:819148..822647+ (Aspergillus niger KJC3)
ATGCACACCAAATCGGCGGTTGCGACAACCCGCGATCTGACAGCCACGAA
AACAAAGACCGCATACCCTGCCGGAAAACAGGTCAATGGCACCTTGGCTC
AGCCGGGCCGCGGTCCCAAACACCGCACCGGCAATCAGCGGGATCCAGCC
TCCACCAAGCAATCAGCCCTTCAAGTCACGAAGCCTCATCGTTCGCGTTC
CACATCCCCACTGCGACCAACATCGAGCTTGAGCTCGTCGCCGTCTACAC
ACAGCCTGTCCCTGAATTCCGTCAATACCCCCACCCTCAACCGAAAGCCA
TCGTGGCAGCGACCTCGCAAAACCGTGCAAGACTTGGAGGATGAATACCA
TGACTCCGATGAAGAGTTACCCGAGGATGCGAGTCTCTGGAATGTTCCCA
TCTCCCCGCGGCCGGTACAGGATCGAGCGCCGTCCCGGGCCTCCAGCCCC
AACGGTCGCAGTCCTGGCCCTCGACCCCTGCCGCTGTCGCATTCGGTTTC
CGATGTCACCATTCCCCGGTCGCCTTCCGGTTCACGATCCCCCACGACCC
GCAACAATCGTTCCAGCTCTGCAGGACCTGAGCGCGGTCAGATCTCGCCC
CGCAACCCGCGAGCATACTCGTACAACAATATGATGTCGGATTTGTCGGA
AGAGGCCAAGATCATTACGGAAGCCTTGGAATTCCACGCCGATGAGCGCC
AGCGCCAGCGGGGAGAGCGCCTGCAAAGCGGGCTCTCCTCTCTCCGGTCG
AGCGAGGAGTCCAAGCGTGGGTCCAAAAGCACCATTGAGCTGCCCCCGTT
GCAGAAATCCAACATCATGATCGATCCGTTACCTCCCAGCAAGGAGAAGG
AGAAGGTCCTGACGCGGACGCGGCCCAGCTGGCTGCCTCCGAAGGATCAG
AAGGAGGAGAAGCGGCATTTGAAGGAATACAAGCGGATGATGGCGCAGGC
CCGGGAAGCAGACAAGCGTCGTGCTGCGAAGGCTGCTTCCGCGAAATGCG
AAAAGGACAACACTCGCGAGACTCTCCAGCAGATCTGGGACGAGTATGTG
TACCCGAACTGGGATAATGTCATTAATGAAACCCGTACGCGGGAGTTATG
GTGGCGCGGAGTGCCGCCTCGGATCCGGGGCTCGACCTGGCAGCGTGCTA
TCGGCAATGAGCTGGCTCTCTCCGAGGAAACATACAAAAAGGCCTTGCAA
CGCGCCAAGGACGTGCGGGCGCGGCCCGAGGGTGATTCAGGGGAGACCAA
CAAGCGCATGAGGGATTGGTTCGAGGCGATCGACGCTGATGCGTCCAAGG
CATTCCCCGATTTGAACTTGTTTCAGGTCGGCGGTCCGCTGCGCGAGACA
TTGATCGATGTTTTGCAGGCCTACTCTATGTATCGCAGCGACGTGGGCTA
TGTCAGTGGCTTGCATACCATCGCTGCCCTGCTTGTCTTGCAATTTCCAT
CGCCATCGTCGGCGTTCCTTGCCATGGCCAATGCGCTCAATCGGCCGCTC
CCTGTTGCTTTTCTTACGTTGGACCGCGGGGCGATCGGTCGTACATATTC
ACTGGCGTCTGCGACGCTGAAATACAAATTCCCGCGTTTGATGACGCATT
TGCACGAGACGCTCCGACTCAGCGACGAAGAGATCTGGGAACCGATGTTC
CGGTCTCTGCTGACGAACGGACTGGACTTGGAGCGTCTCAGCCGGGTCTG
GGACTGCTGGGTATTCGAAGGTGACCGGATCATGATCCGGGCGGGCGTCG
CGATCCTCGGTTGCTTGCAGCCACAGCTGTTTGGGTACACCAAGCCGGAC
GACCAGAGTCGCAAGGCGGTGCAGGATATTCTCAGCTGGGGACCCCGACA
GGGGGGCACTCGGACGCAGGAGCGACACAGTGCCCCGGCCTCCGCGACTG
GGTTCGGAGGCGGGCAGATGGCGTCCGGGATGGGCGATTACTGGATGTTG
GGCTCGGCGGGTGACGAGGATGGCTTTATGCATGAAGTGCGCGAGGCGGG
CAAGGTGCGATGAATGCACACCAAATCGGCGGTTGCGACAACCCGCGATC
TGACAGCCACGAAAACAAAGACCGCATACCCTGCCGGAAAACAGGTCAAT
GGCACCTTGGCTCAGCCGGGCCGCGGTCCCAAACACCGCACCGGCAATCA
GCGGGATCCAGCCTCCACCAAGCAATCAGCCCTTCAAGTCACGAAGCCTC
ATCGTTCGCGTTCCACATCCCCACTGCGACCAACATCGAGCTTGAGCTCG
TCGCCGTCTACACACAGCCTGTCCCTGAATTCCGTCAATACCCCCACCCT
CAACCGAAAGCCATCGTGGCAGCGACCTCGCAAAACCGTGCAAGACTTGG
AGGATGAATACCATGACTCCGATGAAGAGTTACCCGAGGATGCGAGTCTC
TGGAATGTTCCCATCTCCCCGCGGCCGGTACAGGATCGAGCGCCGTCCCG
GGCCTCCAGCCCCAACGGTCGCAGTCCTGGCCCTCGACCCCTGCCGCTGT
CGCATTCGGTTTCCGATGTCACCATTCCCCGGTCGCCTTCCGGTTCACGA
TCCCCCACGACCCGCAACAATCGTTCCAGCTCTGCAGGACCTGAGCGCGG
TCAGATCTCGCCCCGCAACCCGCGAGCATACTCGTACAACAATATGATGT
CGGATTTGTCGGAAGAGGCCAAGATCATTACGGAAGCCTTGGAATTCCAC
GCCGATGAGCGCCAGCGCCAGCGGGGAGAGCGCCTGCAAAGCGGGCTCTC
CTCTCTCCGGTCGAGCGAGGAGTCCAAGCGTGGGTCCAAAAGCACCATTG
AGCTGCCCCCGTTGCAGAAATCCAACATCATGATCGATCCGTTACCTCCC
AGCAAGGAGAAGGAGAAGGTCCTGACGCGGACGCGGCCCAGCTGGCTGCC
TCCGAAGGATCAGAAGGAGGAGAAGCGGCATTTGAAGGAATACAAGCGGA
TGATGGCGCAGGCCCGGGAAGCAGACAAGCGTCGTGCTGCGAAGGCTGCT
TCCGCGAAATGCGAAAAGGACAACACTCGCGAGACTCTCCAGCAGATCTG
GGACGAGTATGTGTACCCGAACTGGGATAATGTCATTAATGAAACCCGTA
CGCGGGAGTTATGGTGGCGCGGAGTGCCGCCTCGGATCCGGGGCTCGACC
TGGCAGCGTGCTATCGGCAATGAGCTGGCTCTCTCCGAGGAAACATACAA
AAAGGCCTTGCAACGCGCCAAGGACGTGCGGGCGCGGCCCGAGGGTGATT
CAGGGGAGACCAACAAGCGCATGAGGGATTGGTTCGAGGCGATCGACGCT
GATGCGTCCAAGGCATTCCCCGATTTGAACTTGTTTCAGGTCGGCGGTCC
GCTGCGCGAGACATTGATCGATGTTTTGCAGGCCTACTCTATGTATCGCA
GCGACGTGGGCTATGTCAGTGGCTTGCATACCATCGCTGCCCTGCTTGTC
TTGCAATTTCCATCGCCATCGTCGGCGTTCCTTGCCATGGCCAATGCGCT
CAATCGGCCGCTCCCTGTTGCTTTTCTTACGTTGGACCGCGGGGCGATCG
GTCGTACATATTCACTGGCGTCTGCGACGCTGAAATACAAATTCCCGCGT
TTGATGACGCATTTGCACGAGACGCTCCGACTCAGCGACGAAGAGATCTG
GGAACCGATGTTCCGGTCTCTGCTGACGAACGGACTGGACTTGGAGCGTC
TCAGCCGGGTCTGGGACTGCTGGGTATTCGAAGGTGACCGGATCATGATC
CGGGCGGGCGTCGCGATCCTCGGTTGCTTGCAGCCACAGCTGTTTGGGTA
CACCAAGCCGGACGACCAGAGTCGCAAGGCGGTGCAGGATATTCTCAGCT
GGGGACCCCGACAGGGGGGCACTCGGACGCAGGAGCGACACAGTGCCCCG
GCCTCCGCGACTGGGTTCGGAGGCGGGCAGATGGCGTCCGGGATGGGCGA
TTACTGGATGTTGGGCTCGGCGGGTGACGAGGATGGCTTTATGCATGAAG
TGCGCGAGGCGGGCAAGGTGCGATGAATGCACACCAAATCGGCGGTTGCG
ACAACCCGCGATCTGACAGCCACGAAAACAAAGACCGCATACCCTGCCGG
AAAACAGGTCAATGGCACCTTGGCTCAGCCGGGCCGCGGTCCCAAACACC
GCACCGGCAATCAGCGGGATCCAGCCTCCACCAAGCAATCAGCCCTTCAA
GTCACGAAGCCTCATCGTTCGCGTTCCACATCCCCACTGCGACCAACATC
GAGCTTGAGCTCGTCGCCGTCTACACACAGCCTGTCCCTGAATTCCGTCA
ATACCCCCACCCTCAACCGAAAGCCATCGTGGCAGCGACCTCGCAAAACC
GTGCAAGACTTGGAGGATGAATACCATGACTCCGATGAAGAGTTACCCGA
GGATGCGAGTCTCTGGAATGTTCCCATCTCCCCGCGGCCGGTACAGGATC
GAGCGCCGTCCCGGGCCTCCAGCCCCAACGGTCGCAGTCCTGGCCCTCGA
CCCCTGCCGCTGTCGCATTCGGTTTCCGATGTCACCATTCCCCGGTCGCC
TTCCGGTTCACGATCCCCCACGACCCGCAACAATCGTTCCAGCTCTGCAG
GACCTGAGCGCGGTCAGATCTCGCCCCGCAACCCGCGAGCATACTCGTAC
AACAATATGATGTCGGATTTGTCGGAAGAGGCCAAGATCATTACGGAAGC
CTTGGAATTCCACGCCGATGAGCGCCAGCGCCAGCGGGGAGAGCGCCTGC
AAAGCGGGCTCTCCTCTCTCCGGTCGAGCGAGGAGTCCAAGCGTGGGTCC
AAAAGCACCATTGAGCTGCCCCCGTTGCAGAAATCCAACATCATGATCGA
TCCGTTACCTCCCAGCAAGGAGAAGGAGAAGGTCCTGACGCGGACGCGGC
CCAGCTGGCTGCCTCCGAAGGATCAGAAGGAGGAGAAGCGGCATTTGAAG
GAATACAAGCGGATGATGGCGCAGGCCCGGGAAGCAGACAAGCGTCGTGC
TGCGAAGGCTGCTTCCGCGAAATGCGAAAAGGACAACACTCGCGAGACTC
TCCAGCAGATCTGGGACGAGTATGTGTACCCGAACTGGGATAATGTCATT
AATGAAACCCGTACGCGGGAGTTATGGTGGCGCGGAGTGCCGCCTCGGAT
CCGGGGCTCGACCTGGCAGCGTGCTATCGGCAATGAGCTGGCTCTCTCCG
AGGAAACATACAAAAAGGCCTTGCAACGCGCCAAGGACGTGCGGGCGCGG
CCCGAGGGTGATTCAGGGGAGACCAACAAGCGCATGAGGGATTGGTTCGA
GGCGATCGACGCTGATGCGTCCAAGGCATTCCCCGATTTGAACTTGTTTC
AGGTCGGCGGTCCGCTGCGCGAGACATTGATCGATGTTTTGCAGGCCTAC
TCTATGTATCGCAGCGACGTGGGCTATGTCAGTGGCTTGCATACCATCGC
TGCCCTGCTTGTCTTGCAATTTCCATCGCCATCGTCGGCGTTCCTTGCCA
TGGCCAATGCGCTCAATCGGCCGCTCCCTGTTGCTTTTCTTACGTTGGAC
CGCGGGGCGATCGGTCGTACATATTCACTGGCGTCTGCGACGCTGAAATA
CAAATTCCCGCGTTTGATGACGCATTTGCACGAGACGCTCCGACTCAGCG
ACGAAGAGATCTGGGAACCGATGTTCCGGTCTCTGCTGACGAACGGACTG
GACTTGGAGCGTCTCAGCCGGGTCTGGGACTGCTGGGTATTCGAAGGTGA
CCGGATCATGATCCGGGCGGGCGTCGCGATCCTCGGTTGCTTGCAGCCAC
AGCTGTTTGGGTACACCAAGCCGGACGACCAGAGTCGCAAGGCGGTGCAG
GATATTCTCAGCTGGGGACCCCGACAGGGGGGCACTCGGACGCAGGAGCG
ACACAGTGCCCCGGCCTCCGCGACTGGGTTCGGAGGCGGGCAGATGGCGT
CCGGGATGGGCGATTACTGGATGTTGGGCTCGGCGGGTGACGAGGATGGC
TTTATGCATGAAGTGCGCGAGGCGGGCAAGGTGCGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001832-T1.utr3p1 | KJC3_001832-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035969 |
| DBxref | InterPro:IPR000195 |
| DBxref | PFAM:PF00566 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:819148..822647 + |
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